RNA–Protein interactions for RNA: ENST00000396995.1

NRL-201, Transcript of neural retina leucine zipper, humanhuman

TSL 1 (best) BASIC

Gene NRL, Length 810 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRL-201ENST00000396995 NISCHQ9Y2I1 1504 aa52■■■■■ 5.92
NRL-201ENST00000396995 ABCC9O60706 1549 aa47.86■■■■■ 5.25
NRL-201ENST00000396995 CCDC180Q9P1Z9 1646 aa47.16■■■■■ 5.14
NRL-201ENST00000396995 DNAJC5BQ9UF47 199 aa45.79■■■■■ 4.92
NRL-201ENST00000396995 RB1CC1Q8TDY2 1594 aa45.24■■■■■ 4.83
NRL-201ENST00000396995 NACADO15069 1562 aa44.73■■■■■ 4.75
NRL-201ENST00000396995 UNC13AQ9UPW8 1703 aa44.41■■■■■ 4.7
NRL-201ENST00000396995 PABPN1Q86U42 306 aaKnown RBP eCLIP44.31■■■■■ 4.68
NRL-201ENST00000396995 BICRAQ9NZM4 1560 aa44.08■■■■■ 4.65
NRL-201ENST00000396995 MYO15BQ96JP2 1530 aa43.89■■■■■ 4.62
NRL-201ENST00000396995 DCAF8L2P0C7V8 631 aa43.87■■■■■ 4.61
NRL-201ENST00000396995 SHROOM4Q9ULL8 1493 aa43.36■■■■■ 4.53
NRL-201ENST00000396995 ZCCHC6Q5VYS8 1495 aaKnown RBP43.32■■■■■ 4.52
NRL-201ENST00000396995 CC2D2AQ9P2K1 1620 aa43.31■■■■■ 4.52
NRL-201ENST00000396995 CECR2Q9BXF3 1484 aa43.25■■■■■ 4.51
NRL-201ENST00000396995 DCAF1Q9Y4B6 1507 aa43.07■■■■■ 4.49
NRL-201ENST00000396995 EIF4G1Q04637 1599 aaKnown RBP42.99■■■■■ 4.47
NRL-201ENST00000396995 SCRIBQ14160 1630 aa42.77■■■■■ 4.44
NRL-201ENST00000396995 DNAJC5Q9H3Z4 198 aa42.7■■■■■ 4.43
NRL-201ENST00000396995 CUX2O14529 1486 aa41.73■■■■■ 4.27
NRL-201ENST00000396995 ERCC6Q03468 1493 aa41.34■■■■■ 4.21
NRL-201ENST00000396995 NCAPD3P42695 1498 aa41.29■■■■■ 4.2
NRL-201ENST00000396995 ATAD2BQ9ULI0 1458 aa41.02■■■■■ 4.16
NRL-201ENST00000396995 HMGXB3Q12766 1538 aa40.95■■■■■ 4.15
NRL-201ENST00000396995 NESP48681 1621 aa40.91■■■■■ 4.14
NRL-201ENST00000396995 SMARCA2P51531 1590 aa40.85■■■■■ 4.13
NRL-201ENST00000396995 THOC2Q8NI27 1593 aaKnown RBP40.82■■■■■ 4.13
NRL-201ENST00000396995 SMARCA4P51532 1647 aa40.78■■■■■ 4.12
NRL-201ENST00000396995 LAMC3Q9Y6N6 1575 aa40.52■■■■■ 4.08
NRL-201ENST00000396995 BAZ1BQ9UIG0 1483 aaKnown RBP40.5■■■■■ 4.07
NRL-201ENST00000396995 PEG3Q9GZU2 1588 aa40.47■■■■■ 4.07
NRL-201ENST00000396995 KIF21AQ7Z4S6 1674 aa40.45■■■■■ 4.07
NRL-201ENST00000396995 BAZ1AQ9NRL2 1556 aaPredicted RBP40.39■■■■■ 4.06
NRL-201ENST00000396995 TRIM41Q8WV44 630 aa40.25■■■■■ 4.03
NRL-201ENST00000396995 PDS5BQ9NTI5 1447 aa40.2■■■■■ 4.03
NRL-201ENST00000396995 MROH2BQ7Z745 1585 aa40.07■■■■■ 4.01
NRL-201ENST00000396995 WDR62O43379 1518 aa40■■■■□ 3.99
NRL-201ENST00000396995 MRC2Q9UBG0 1479 aa39.98■■■■□ 3.99
NRL-201ENST00000396995 CADPSQ9ULU8 1353 aa39.91■■■■□ 3.98
NRL-201ENST00000396995 WIZO95785 1651 aa39.64■■■■□ 3.94
NRL-201ENST00000396995 CEP164Q9UPV0 1460 aa39.6■■■■□ 3.93
NRL-201ENST00000396995 RSF1Q96T23 1441 aaPredicted RBP39.58■■■■□ 3.93
NRL-201ENST00000396995 OSCARQ8IYS5 282 aa39.48■■■■□ 3.91
NRL-201ENST00000396995 FANCD2Q9BXW9 1451 aa39.48■■■■□ 3.91
NRL-201ENST00000396995 CFTRP13569 1480 aa39.33■■■■□ 3.89
NRL-201ENST00000396995 RIMBP3CA6NJZ7 1639 aa39.29■■■■□ 3.88
NRL-201ENST00000396995 RIMBP3BA6NNM3 1639 aa39.29■■■■□ 3.88
NRL-201ENST00000396995 RIMBP3Q9UFD9 1639 aa39.29■■■■□ 3.88
NRL-201ENST00000396995 URB2Q14146 1524 aaKnown RBP39.28■■■■□ 3.88
NRL-201ENST00000396995 TOP2AP11388 1531 aaKnown RBP39.22■■■■□ 3.87
NRL-201ENST00000396995 ARHGEF11O15085 1522 aa39.04■■■■□ 3.84
NRL-201ENST00000396995 PRDM2Q13029 1718 aa39.02■■■■□ 3.84
NRL-201ENST00000396995 ZNF608Q9ULD9 1512 aaPredicted RBP38.92■■■■□ 3.82
NRL-201ENST00000396995 IFT140Q96RY7 1462 aa38.86■■■■□ 3.81
NRL-201ENST00000396995 CCDC88BA6NC98 1476 aa38.74■■■■□ 3.79
NRL-201ENST00000396995 EIF4G3O43432 1585 aaKnown RBP38.71■■■■□ 3.79
NRL-201ENST00000396995 TOPBP1Q92547 1522 aa38.67■■■■□ 3.78
NRL-201ENST00000396995 CHD1O14646 1710 aa38.63■■■■□ 3.78
NRL-201ENST00000396995 ARAP1Q96P48 1450 aa38.6■■■■□ 3.77
NRL-201ENST00000396995 CYB5RLQ6IPT4 315 aa38.59■■■■□ 3.77
NRL-201ENST00000396995 TARBP1Q13395 1621 aaKnown RBP38.49■■■■□ 3.75
NRL-201ENST00000396995 ABCC8Q09428 1581 aa38.47■■■■□ 3.75
NRL-201ENST00000396995 DNMBPQ6XZF7 1577 aa38.46■■■■□ 3.75
NRL-201ENST00000396995 SUPT5HO00267 1087 aaKnown RBP38.43■■■■□ 3.74
NRL-201ENST00000396995 TRHP20396 242 aaPredicted RBP38.38■■■■□ 3.73
NRL-201ENST00000396995 AQRO60306 1485 aaKnown RBP eCLIP38.38■■■■□ 3.73
NRL-201ENST00000396995 POLA1P09884 1462 aaPredicted RBP38.21■■■■□ 3.71
NRL-201ENST00000396995 CLASP1Q7Z460 1538 aa38.17■■■■□ 3.7
NRL-201ENST00000396995 FBLN2P98095 1184 aa38.1■■■■□ 3.69
NRL-201ENST00000396995 RAD54L2Q9Y4B4 1467 aa38.03■■■■□ 3.68
NRL-201ENST00000396995 WDR97A6NE52 1622 aa38.02■■■■□ 3.68
NRL-201ENST00000396995 SNAPC4Q5SXM2 1469 aa37.99■■■■□ 3.67
NRL-201ENST00000396995 SYNJ1O43426 1573 aa37.96■■■■□ 3.67
NRL-201ENST00000396995 TDRD9Q8NDG6 1382 aaKnown RBP37.94■■■■□ 3.66
NRL-201ENST00000396995 AEBP2Q6ZN18 517 aaPredicted RBP37.93■■■■□ 3.66
NRL-201ENST00000396995 SOGA1O94964 1423 aa37.91■■■■□ 3.66
NRL-201ENST00000396995 MAGI1Q96QZ7 1491 aaPredicted RBP37.89■■■■□ 3.66
NRL-201ENST00000396995 FGD5Q6ZNL6 1462 aa37.8■■■■□ 3.64
NRL-201ENST00000396995 SYNJ2O15056 1496 aa37.76■■■■□ 3.63
NRL-201ENST00000396995 GRIN2BQ13224 1484 aa37.75■■■■□ 3.63
NRL-201ENST00000396995 CHMP7Q8WUX9 453 aaPredicted RBP37.73■■■■□ 3.63
NRL-201ENST00000396995 GAPVD1Q14C86 1478 aa37.7■■■■□ 3.63
NRL-201ENST00000396995 CUX1P39880 1505 aa37.68■■■■□ 3.62
NRL-201ENST00000396995 PBRM1Q86U86 1689 aa37.66■■■■□ 3.62
NRL-201ENST00000396995 ABCA5Q8WWZ7 1642 aa37.47■■■■□ 3.59
NRL-201ENST00000396995 ERCC6L2Q5T890 1561 aa37.47■■■■□ 3.59
NRL-201ENST00000396995 ABCA10Q8WWZ4 1543 aa37.37■■■■□ 3.57
NRL-201ENST00000396995 KIF13AQ9H1H9 1805 aa37.33■■■■□ 3.57
NRL-201ENST00000396995 CEP170Q5SW79 1584 aa37.31■■■■□ 3.56
NRL-201ENST00000396995 WRNQ14191 1432 aaPredicted RBP eCLIP37.3■■■■□ 3.56
NRL-201ENST00000396995 GRIN2AQ12879 1464 aa37.29■■■■□ 3.56
NRL-201ENST00000396995 SHROOM2Q13796 1616 aa37.28■■■■□ 3.56
NRL-201ENST00000396995 BIVM-ERCC5R4GMW8 1640 aa37.28■■■■□ 3.56
NRL-201ENST00000396995 TOP2BQ02880 1626 aa37.28■■■■□ 3.56
NRL-201ENST00000396995 NUP160Q12769 1436 aa37.26■■■■□ 3.55
NRL-201ENST00000396995 ADAMTS12P58397 1594 aa37.23■■■■□ 3.55
NRL-201ENST00000396995 FHAD1B1AJZ9 1412 aa36.97■■■■□ 3.51
NRL-201ENST00000396995 ERICH3Q5RHP9 1530 aa36.88■■■■□ 3.49
NRL-201ENST00000396995 ABCC10Q5T3U5 1492 aa36.88■■■■□ 3.49
NRL-201ENST00000396995 PRG4Q92954 1404 aaPredicted RBP36.85■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms