Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SYNE2Q8WXH0 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
SYNE2Q8WXH0 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC14.69□□□□□ -0.06
SYNE2Q8WXH0 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SYNE2Q8WXH0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SYNE2Q8WXH0 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SYNE2Q8WXH0 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYNE2Q8WXH0 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SYNE2Q8WXH0 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SYNE2Q8WXH0 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC14.09□□□□□ -0.15
SYNE2Q8WXH0 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SYNE2Q8WXH0 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC14.04□□□□□ -0.16
SYNE2Q8WXH0 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SYNE2Q8WXH0 ZNRF2P1-201ENST00000441407 443 ntBASIC13.99□□□□□ -0.17
SYNE2Q8WXH0 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SYNE2Q8WXH0 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SYNE2Q8WXH0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC13.8□□□□□ -0.2
SYNE2Q8WXH0 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SYNE2Q8WXH0 AC006077.2-201ENST00000623591 457 ntBASIC13.78□□□□□ -0.2
SYNE2Q8WXH0 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SYNE2Q8WXH0 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SYNE2Q8WXH0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SYNE2Q8WXH0 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC13.71□□□□□ -0.22
SYNE2Q8WXH0 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC13.71□□□□□ -0.22
SYNE2Q8WXH0 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SYNE2Q8WXH0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SYNE2Q8WXH0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
SYNE2Q8WXH0 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SYNE2Q8WXH0 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SYNE2Q8WXH0 INO80B-203ENST00000409917 796 ntTSL 2 BASIC13.61□□□□□ -0.23
SYNE2Q8WXH0 AP002365.1-201ENST00000603448 772 ntBASIC13.58□□□□□ -0.24
SYNE2Q8WXH0 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SYNE2Q8WXH0 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC13.56□□□□□ -0.24
SYNE2Q8WXH0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC13.56□□□□□ -0.24
SYNE2Q8WXH0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SYNE2Q8WXH0 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SYNE2Q8WXH0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
SYNE2Q8WXH0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
SYNE2Q8WXH0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
SYNE2Q8WXH0 RPS2P35-201ENST00000443417 897 ntBASIC13.45□□□□□ -0.26
SYNE2Q8WXH0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SYNE2Q8WXH0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC13.42□□□□□ -0.26
SYNE2Q8WXH0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SYNE2Q8WXH0 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SYNE2Q8WXH0 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC13.33□□□□□ -0.28
SYNE2Q8WXH0 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
SYNE2Q8WXH0 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC13.3□□□□□ -0.28
SYNE2Q8WXH0 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SYNE2Q8WXH0 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SYNE2Q8WXH0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC13.25□□□□□ -0.29
SYNE2Q8WXH0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC13.25□□□□□ -0.29
SYNE2Q8WXH0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC13.22□□□□□ -0.29
SYNE2Q8WXH0 AC015813.7-201ENST00000623294 581 ntBASIC13.2□□□□□ -0.3
SYNE2Q8WXH0 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SYNE2Q8WXH0 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SYNE2Q8WXH0 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC13.15□□□□□ -0.3
SYNE2Q8WXH0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC13.1□□□□□ -0.31
SYNE2Q8WXH0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SYNE2Q8WXH0 AL356512.1-201ENST00000607453 1739 ntBASIC13.08□□□□□ -0.32
SYNE2Q8WXH0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC13.07□□□□□ -0.32
SYNE2Q8WXH0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC13.07□□□□□ -0.32
SYNE2Q8WXH0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC13.04□□□□□ -0.32
SYNE2Q8WXH0 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SYNE2Q8WXH0 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SYNE2Q8WXH0 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SYNE2Q8WXH0 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SYNE2Q8WXH0 HLA-V-202ENST00000446817 847 ntBASIC12.96□□□□□ -0.33
SYNE2Q8WXH0 SUZ12P1-203ENST00000578195 985 ntBASIC12.95□□□□□ -0.34
SYNE2Q8WXH0 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SYNE2Q8WXH0 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC12.94□□□□□ -0.34
SYNE2Q8WXH0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SYNE2Q8WXH0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SYNE2Q8WXH0 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SYNE2Q8WXH0 DYNLL1-208ENST00000550178 581 ntBASIC12.92□□□□□ -0.34
SYNE2Q8WXH0 RARRES2P7-201ENST00000567349 469 ntBASIC12.92□□□□□ -0.34
SYNE2Q8WXH0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SYNE2Q8WXH0 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC12.91□□□□□ -0.34
SYNE2Q8WXH0 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC12.91□□□□□ -0.34
SYNE2Q8WXH0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SYNE2Q8WXH0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SYNE2Q8WXH0 MIR7108-201ENST00000614319 87 ntBASIC12.9□□□□□ -0.34
SYNE2Q8WXH0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SYNE2Q8WXH0 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SYNE2Q8WXH0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC12.86□□□□□ -0.35
SYNE2Q8WXH0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SYNE2Q8WXH0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC12.86□□□□□ -0.35
SYNE2Q8WXH0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC12.86□□□□□ -0.35
SYNE2Q8WXH0 AC097358.2-201ENST00000607541 1159 ntBASIC12.85□□□□□ -0.35
SYNE2Q8WXH0 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC12.85□□□□□ -0.35
SYNE2Q8WXH0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SYNE2Q8WXH0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC12.84□□□□□ -0.35
SYNE2Q8WXH0 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SYNE2Q8WXH0 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SYNE2Q8WXH0 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SYNE2Q8WXH0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SYNE2Q8WXH0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC12.78□□□□□ -0.36
SYNE2Q8WXH0 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SYNE2Q8WXH0 AC136428.2-201ENST00000563187 214 ntBASIC12.77□□□□□ -0.36
SYNE2Q8WXH0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC12.77□□□□□ -0.37
SYNE2Q8WXH0 ABHD17AP4-201ENST00000411545 909 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms