Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 AP004833.2-201ENST00000532228 1454 ntBASIC23.63■■□□□ 1.37
RPP38P78345 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
RPP38P78345 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RPP38P78345 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RPP38P78345 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RPP38P78345 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
RPP38P78345 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RPP38P78345 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RPP38P78345 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RPP38P78345 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RPP38P78345 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.62■■□□□ 1.37
RPP38P78345 AC135983.2-203ENST00000454486 1613 ntBASIC23.62■■□□□ 1.37
RPP38P78345 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RPP38P78345 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RPP38P78345 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.61■■□□□ 1.37
RPP38P78345 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RPP38P78345 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RPP38P78345 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RPP38P78345 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RPP38P78345 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RPP38P78345 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
RPP38P78345 DUX4L13-201ENST00000554103 1267 ntBASIC23.59■■□□□ 1.37
RPP38P78345 DUX4L15-201ENST00000611059 1267 ntBASIC23.59■■□□□ 1.37
RPP38P78345 DUX4L23-201ENST00000615195 1269 ntBASIC23.59■■□□□ 1.37
RPP38P78345 DUX4L24-201ENST00000617576 1269 ntBASIC23.59■■□□□ 1.37
RPP38P78345 DUX4L22-201ENST00000618238 1269 ntBASIC23.59■■□□□ 1.37
RPP38P78345 DUX4L20-201ENST00000619712 1269 ntBASIC23.59■■□□□ 1.37
RPP38P78345 DUX4L21-201ENST00000622058 1269 ntBASIC23.59■■□□□ 1.37
RPP38P78345 DUX4L10-201ENST00000622460 1267 ntBASIC23.59■■□□□ 1.37
RPP38P78345 DUX4L25-201ENST00000624915 1269 ntBASIC23.59■■□□□ 1.37
RPP38P78345 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.59■■□□□ 1.37
RPP38P78345 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RPP38P78345 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.59■■□□□ 1.37
RPP38P78345 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.58■■□□□ 1.37
RPP38P78345 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RPP38P78345 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.58■■□□□ 1.37
RPP38P78345 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.58■■□□□ 1.37
RPP38P78345 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.58■■□□□ 1.36
RPP38P78345 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
RPP38P78345 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RPP38P78345 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RPP38P78345 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
RPP38P78345 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RPP38P78345 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RPP38P78345 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
RPP38P78345 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
RPP38P78345 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.57■■□□□ 1.36
RPP38P78345 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
RPP38P78345 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
RPP38P78345 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RPP38P78345 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
RPP38P78345 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.56■■□□□ 1.36
RPP38P78345 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
RPP38P78345 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.55■■□□□ 1.36
RPP38P78345 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.55■■□□□ 1.36
RPP38P78345 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RPP38P78345 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RPP38P78345 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RPP38P78345 WHAMMP2-203ENST00000563942 1603 ntBASIC23.55■■□□□ 1.36
RPP38P78345 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RPP38P78345 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
RPP38P78345 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RPP38P78345 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RPP38P78345 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RPP38P78345 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
RPP38P78345 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RPP38P78345 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.53■■□□□ 1.36
RPP38P78345 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.52■■□□□ 1.36
RPP38P78345 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPP38P78345 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RPP38P78345 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPP38P78345 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.52■■□□□ 1.36
RPP38P78345 MIR3648-2-201ENST00000581792 180 ntBASIC23.52■■□□□ 1.36
RPP38P78345 MIR3648-1-201ENST00000615959 180 ntBASIC23.52■■□□□ 1.36
RPP38P78345 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPP38P78345 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RPP38P78345 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RPP38P78345 HLA-V-202ENST00000446817 847 ntBASIC23.51■■□□□ 1.35
RPP38P78345 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
RPP38P78345 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.51■■□□□ 1.35
RPP38P78345 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.51■■□□□ 1.35
RPP38P78345 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RPP38P78345 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RPP38P78345 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RPP38P78345 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RPP38P78345 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RPP38P78345 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RPP38P78345 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RPP38P78345 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
RPP38P78345 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.5■■□□□ 1.35
RPP38P78345 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.49■■□□□ 1.35
RPP38P78345 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RPP38P78345 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
RPP38P78345 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RPP38P78345 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.49■■□□□ 1.35
RPP38P78345 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.49■■□□□ 1.35
RPP38P78345 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RPP38P78345 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RPP38P78345 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.48■■□□□ 1.35
RPP38P78345 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms