Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
AP3D1O14617 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
AP3D1O14617 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
AP3D1O14617 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
AP3D1O14617 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.3■■□□□ 1.32
AP3D1O14617 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.3■■□□□ 1.32
AP3D1O14617 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
AP3D1O14617 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
AP3D1O14617 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.29■■□□□ 1.32
AP3D1O14617 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
AP3D1O14617 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.29■■□□□ 1.32
AP3D1O14617 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
AP3D1O14617 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
AP3D1O14617 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.28■■□□□ 1.32
AP3D1O14617 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
AP3D1O14617 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
AP3D1O14617 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
AP3D1O14617 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
AP3D1O14617 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
AP3D1O14617 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
AP3D1O14617 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.27■■□□□ 1.32
AP3D1O14617 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
AP3D1O14617 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
AP3D1O14617 DUX4L29-201ENST00000425409 679 ntBASIC23.26■■□□□ 1.31
AP3D1O14617 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
AP3D1O14617 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
AP3D1O14617 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
AP3D1O14617 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
AP3D1O14617 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
AP3D1O14617 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
AP3D1O14617 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
AP3D1O14617 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
AP3D1O14617 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.25■■□□□ 1.31
AP3D1O14617 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
AP3D1O14617 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.25■■□□□ 1.31
AP3D1O14617 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
AP3D1O14617 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
AP3D1O14617 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
AP3D1O14617 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
AP3D1O14617 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
AP3D1O14617 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
AP3D1O14617 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
AP3D1O14617 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.23■■□□□ 1.31
AP3D1O14617 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.23■■□□□ 1.31
AP3D1O14617 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
AP3D1O14617 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
AP3D1O14617 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.22■■□□□ 1.31
AP3D1O14617 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
AP3D1O14617 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.22■■□□□ 1.31
AP3D1O14617 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
AP3D1O14617 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.22■■□□□ 1.31
AP3D1O14617 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
AP3D1O14617 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
AP3D1O14617 AC018358.1-201ENST00000631079 1402 ntBASIC23.21■■□□□ 1.31
AP3D1O14617 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
AP3D1O14617 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
AP3D1O14617 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
AP3D1O14617 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
AP3D1O14617 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
AP3D1O14617 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
AP3D1O14617 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.19■■□□□ 1.3
AP3D1O14617 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
AP3D1O14617 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
AP3D1O14617 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.19■■□□□ 1.3
AP3D1O14617 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
AP3D1O14617 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
AP3D1O14617 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.18■■□□□ 1.3
AP3D1O14617 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
AP3D1O14617 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.18■■□□□ 1.3
AP3D1O14617 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
AP3D1O14617 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.18■■□□□ 1.3
AP3D1O14617 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.17■■□□□ 1.3
AP3D1O14617 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.17■■□□□ 1.3
AP3D1O14617 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
AP3D1O14617 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
AP3D1O14617 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
AP3D1O14617 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.15■■□□□ 1.3
AP3D1O14617 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
AP3D1O14617 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.15■■□□□ 1.3
AP3D1O14617 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
AP3D1O14617 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
AP3D1O14617 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
AP3D1O14617 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
AP3D1O14617 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
AP3D1O14617 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
AP3D1O14617 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
AP3D1O14617 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
AP3D1O14617 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
AP3D1O14617 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
AP3D1O14617 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
AP3D1O14617 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
AP3D1O14617 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
AP3D1O14617 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.13■■□□□ 1.29
AP3D1O14617 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
AP3D1O14617 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
AP3D1O14617 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.13■■□□□ 1.29
AP3D1O14617 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
AP3D1O14617 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.12■■□□□ 1.29
AP3D1O14617 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
AP3D1O14617 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms