Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRDV1A0A1B0GX56 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
TRDV1A0A1B0GX56 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.14■■□□□ 1.14
TRDV1A0A1B0GX56 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.14
TRDV1A0A1B0GX56 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TRDV1A0A1B0GX56 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
TRDV1A0A1B0GX56 AC093323.1-202ENST00000635031 2045 ntBASIC22.14■■□□□ 1.13
TRDV1A0A1B0GX56 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRDV1A0A1B0GX56 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRDV1A0A1B0GX56 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRDV1A0A1B0GX56 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRDV1A0A1B0GX56 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRDV1A0A1B0GX56 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.13■■□□□ 1.13
TRDV1A0A1B0GX56 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC22.13■■□□□ 1.13
TRDV1A0A1B0GX56 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC22.13■■□□□ 1.13
TRDV1A0A1B0GX56 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.13■■□□□ 1.13
TRDV1A0A1B0GX56 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC22.12■■□□□ 1.13
TRDV1A0A1B0GX56 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRDV1A0A1B0GX56 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRDV1A0A1B0GX56 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.12■■□□□ 1.13
TRDV1A0A1B0GX56 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.12■■□□□ 1.13
TRDV1A0A1B0GX56 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRDV1A0A1B0GX56 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.11■■□□□ 1.13
TRDV1A0A1B0GX56 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRDV1A0A1B0GX56 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TRDV1A0A1B0GX56 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.11■■□□□ 1.13
TRDV1A0A1B0GX56 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRDV1A0A1B0GX56 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TRDV1A0A1B0GX56 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
TRDV1A0A1B0GX56 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRDV1A0A1B0GX56 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRDV1A0A1B0GX56 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TRDV1A0A1B0GX56 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRDV1A0A1B0GX56 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.1■■□□□ 1.13
TRDV1A0A1B0GX56 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC22.1■■□□□ 1.13
TRDV1A0A1B0GX56 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.1■■□□□ 1.13
TRDV1A0A1B0GX56 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
TRDV1A0A1B0GX56 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRDV1A0A1B0GX56 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.09■■□□□ 1.13
TRDV1A0A1B0GX56 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
TRDV1A0A1B0GX56 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRDV1A0A1B0GX56 AC092803.2-201ENST00000564287 1899 ntBASIC22.09■■□□□ 1.13
TRDV1A0A1B0GX56 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TRDV1A0A1B0GX56 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.08■■□□□ 1.12
TRDV1A0A1B0GX56 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TRDV1A0A1B0GX56 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.07■■□□□ 1.12
TRDV1A0A1B0GX56 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.06■■□□□ 1.12
TRDV1A0A1B0GX56 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRDV1A0A1B0GX56 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRDV1A0A1B0GX56 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TRDV1A0A1B0GX56 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TRDV1A0A1B0GX56 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.06■■□□□ 1.12
TRDV1A0A1B0GX56 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.05■■□□□ 1.12
TRDV1A0A1B0GX56 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
TRDV1A0A1B0GX56 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRDV1A0A1B0GX56 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.04■■□□□ 1.12
TRDV1A0A1B0GX56 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRDV1A0A1B0GX56 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC22.04■■□□□ 1.12
TRDV1A0A1B0GX56 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRDV1A0A1B0GX56 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRDV1A0A1B0GX56 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRDV1A0A1B0GX56 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRDV1A0A1B0GX56 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRDV1A0A1B0GX56 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.03■■□□□ 1.12
TRDV1A0A1B0GX56 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRDV1A0A1B0GX56 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
TRDV1A0A1B0GX56 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRDV1A0A1B0GX56 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRDV1A0A1B0GX56 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
TRDV1A0A1B0GX56 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
TRDV1A0A1B0GX56 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
TRDV1A0A1B0GX56 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TRDV1A0A1B0GX56 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC22.02■■□□□ 1.12
TRDV1A0A1B0GX56 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.02■■□□□ 1.12
TRDV1A0A1B0GX56 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRDV1A0A1B0GX56 DENR-202ENST00000455982 1052 ntTSL 5 BASIC22.01■■□□□ 1.11
TRDV1A0A1B0GX56 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
TRDV1A0A1B0GX56 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRDV1A0A1B0GX56 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22■■□□□ 1.11
TRDV1A0A1B0GX56 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC22■■□□□ 1.11
TRDV1A0A1B0GX56 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRDV1A0A1B0GX56 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22■■□□□ 1.11
TRDV1A0A1B0GX56 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22■■□□□ 1.11
TRDV1A0A1B0GX56 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRDV1A0A1B0GX56 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRDV1A0A1B0GX56 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRDV1A0A1B0GX56 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRDV1A0A1B0GX56 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.99■■□□□ 1.11
TRDV1A0A1B0GX56 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRDV1A0A1B0GX56 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRDV1A0A1B0GX56 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRDV1A0A1B0GX56 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.98■■□□□ 1.11
TRDV1A0A1B0GX56 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRDV1A0A1B0GX56 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
TRDV1A0A1B0GX56 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRDV1A0A1B0GX56 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRDV1A0A1B0GX56 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRDV1A0A1B0GX56 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
TRDV1A0A1B0GX56 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRDV1A0A1B0GX56 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms