RNA–Protein interactions for RNA: YPR054W

SMK1, Transcript of Middle sporulation-specific mitogen-activated protein kinase (MAPK), yeastyeast

Gene SMK1, Length 1,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMK1YPR054W MTC1P47018 478 aaKnown RBP15.9■□□□□ 0.14
SMK1YPR054W DRS1P32892 752 aaKnown RBP15.18■□□□□ 0.02
SMK1YPR054W FAP1P53971 965 aa14.17□□□□□ -0.14
SMK1YPR054W PRY3P47033 881 aa13.3□□□□□ -0.28
SMK1YPR054W PRI1P10363 409 aa13.25□□□□□ -0.29
SMK1YPR054W DIP2Q12220 943 aaPredicted RBP13.18□□□□□ -0.3
SMK1YPR054W AAD16Q02895 342 aa13.15□□□□□ -0.3
SMK1YPR054W ISW2Q08773 1120 aa13.13□□□□□ -0.31
SMK1YPR054W RPG1P38249 964 aaKnown RBP13.04□□□□□ -0.32
SMK1YPR054W BFR2Q06631 534 aaKnown RBP12.89□□□□□ -0.35
SMK1YPR054W AVT3P36062 692 aa12.74□□□□□ -0.37
SMK1YPR054W RSE1Q04693 1361 aaKnown RBP12.66□□□□□ -0.38
SMK1YPR054W TSR3Q12094 313 aaKnown RBP12.64□□□□□ -0.39
SMK1YPR054W YCK3P39962 524 aa12.48□□□□□ -0.41
SMK1YPR054W HAA1Q12753 694 aaKnown RBP12.35□□□□□ -0.43
SMK1YPR054W RPL17AP05740 184 aaKnown RBP12.29□□□□□ -0.44
SMK1YPR054W RPL17BP46990 184 aaKnown RBP12.29□□□□□ -0.44
SMK1YPR054W REB1P21538 810 aa12.22□□□□□ -0.45
SMK1YPR054W MRPL32P25348 183 aa12.08□□□□□ -0.48
SMK1YPR054W TFA1P36100 482 aa11.73□□□□□ -0.53
SMK1YPR054W SPT21P35209 758 aa11.69□□□□□ -0.54
SMK1YPR054W CDC27P38042 758 aa11.55□□□□□ -0.56
SMK1YPR054W YKR023WP36119 530 aaKnown RBP11.54□□□□□ -0.56
SMK1YPR054W YGL015CP33199 130 aa11.46□□□□□ -0.57
SMK1YPR054W HOP09932 586 aa11.39□□□□□ -0.59
SMK1YPR054W DCD1P06773 312 aa11.38□□□□□ -0.59
SMK1YPR054W RIM101P33400 625 aa11.32□□□□□ -0.6
SMK1YPR054W TFC8Q12308 588 aa11.29□□□□□ -0.6
SMK1YPR054W MON2P48563 1636 aaPredicted RBP11.26□□□□□ -0.61
SMK1YPR054W INO80P53115 1489 aa11.25□□□□□ -0.61
SMK1YPR054W MAP2P38174 421 aaKnown RBP11.17□□□□□ -0.62
SMK1YPR054W UBP10P53874 792 aaPredicted RBP11.07□□□□□ -0.64
SMK1YPR054W SCY1P53009 804 aa11.01□□□□□ -0.65
SMK1YPR054W OXP1P28273 1286 aa11□□□□□ -0.65
SMK1YPR054W BCH2P36122 765 aa10.96□□□□□ -0.65
SMK1YPR054W PTP3P40048 928 aa10.9□□□□□ -0.66
SMK1YPR054W YIL055CP40523 627 aaKnown RBP10.87□□□□□ -0.67
SMK1YPR054W YAH1Q12184 172 aaKnown RBP10.83□□□□□ -0.68
SMK1YPR054W SLX5P32828 619 aaKnown RBP10.8□□□□□ -0.68
SMK1YPR054W DNA2P38859 1522 aa10.71□□□□□ -0.69
SMK1YPR054W EPS1P40557 701 aa10.71□□□□□ -0.69
SMK1YPR054W TIF4632P39936 914 aaKnown RBP10.66□□□□□ -0.7
SMK1YPR054W RSM7P47150 247 aa10.66□□□□□ -0.7
SMK1YPR054W BDF1P35817 686 aa10.64□□□□□ -0.71
SMK1YPR054W AI2P03876 854 aa10.57□□□□□ -0.72
SMK1YPR054W SWR1Q05471 1514 aa10.57□□□□□ -0.72
SMK1YPR054W TGL3P40308 642 aa10.56□□□□□ -0.72
SMK1YPR054W YLR271WQ06152 274 aa10.56□□□□□ -0.72
SMK1YPR054W SSP1P38871 571 aa10.55□□□□□ -0.72
SMK1YPR054W BBC1P47068 1157 aa10.54□□□□□ -0.72
SMK1YPR054W KOG1P38873 1557 aa10.52□□□□□ -0.72
SMK1YPR054W SPA2P23201 1466 aaKnown RBP10.49□□□□□ -0.73
SMK1YPR054W BUD31P25337 157 aaPredicted RBP10.38□□□□□ -0.75
SMK1YPR054W SGS1P35187 1447 aa10.37□□□□□ -0.75
SMK1YPR054W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.37□□□□□ -0.75not detected
SMK1YPR054W TCB3Q03640 1545 aaKnown RBP10.36□□□□□ -0.75
SMK1YPR054W TY1B-DR4Q07793 1604 aa10.34□□□□□ -0.75
SMK1YPR054W PSD2P53037 1138 aaKnown RBP10.32□□□□□ -0.76
SMK1YPR054W SSN2P38931 1420 aa10.28□□□□□ -0.76
SMK1YPR054W CST9Q06032 482 aa10.25□□□□□ -0.77
SMK1YPR054W MRM1P25270 412 aa10.24□□□□□ -0.77
SMK1YPR054W UBP9P39967 754 aa10.19□□□□□ -0.78
SMK1YPR054W MGA2P40578 1113 aa10.19□□□□□ -0.78
SMK1YPR054W YOR238WQ08634 303 aa10.18□□□□□ -0.78
SMK1YPR054W YAP5P40574 245 aa10.14□□□□□ -0.79
SMK1YPR054W NSR1P27476 414 aaKnown RBP RIP-Chip data10.1□□□□□ -0.79not detected
SMK1YPR054W PIB1Q06651 286 aa10.1□□□□□ -0.79
SMK1YPR054W MST1P07236 462 aa10.09□□□□□ -0.79
SMK1YPR054W YBL029C-AQ3E756 94 aa10.07□□□□□ -0.8
SMK1YPR054W SKI3P17883 1432 aaKnown RBP10.04□□□□□ -0.8
SMK1YPR054W WSC3Q12215 556 aa10.01□□□□□ -0.81
SMK1YPR054W SIS1P25294 352 aaKnown RBP9.99□□□□□ -0.81
SMK1YPR054W RCR1P38212 213 aa9.98□□□□□ -0.81
SMK1YPR054W RTG3P38165 486 aa9.97□□□□□ -0.81
SMK1YPR054W GTT3P39996 337 aa9.97□□□□□ -0.81
SMK1YPR054W YFR006WP43590 535 aa9.94□□□□□ -0.82
SMK1YPR054W VPS29P38759 282 aa9.93□□□□□ -0.82
SMK1YPR054W VNX1P42839 908 aa9.9□□□□□ -0.82
SMK1YPR054W SPT6P23615 1451 aaKnown RBP9.9□□□□□ -0.83
SMK1YPR054W HSL1P34244 1518 aa9.89□□□□□ -0.83
SMK1YPR054W DBP1P24784 617 aaKnown RBP9.89□□□□□ -0.83
SMK1YPR054W YMR1P47147 688 aaKnown RBP RIP-Chip data9.89□□□□□ -0.83not detected
SMK1YPR054W STS1P38637 319 aa9.86□□□□□ -0.83
SMK1YPR054W ECM5Q03214 1411 aa9.85□□□□□ -0.83
SMK1YPR054W SPP1Q03012 353 aa9.85□□□□□ -0.83
SMK1YPR054W NOP2P40991 618 aaKnown RBP9.81□□□□□ -0.84
SMK1YPR054W RAM2P29703 316 aa9.77□□□□□ -0.85
SMK1YPR054W THO2P53552 1597 aaKnown RBP9.73□□□□□ -0.85
SMK1YPR054W VMA1P17255 1071 aaKnown RBP9.73□□□□□ -0.85
SMK1YPR054W TIF11P38912 153 aaKnown RBP9.73□□□□□ -0.85
SMK1YPR054W SET4P42948 560 aa9.73□□□□□ -0.85
SMK1YPR054W BUD4P47136 1447 aa9.73□□□□□ -0.85
SMK1YPR054W YOL036WQ08206 761 aa9.7□□□□□ -0.86
SMK1YPR054W ULI1P43604 169 aa9.68□□□□□ -0.86
SMK1YPR054W HIR3P47171 1648 aa9.67□□□□□ -0.86
SMK1YPR054W MDS3P53094 1487 aa9.64□□□□□ -0.87
SMK1YPR054W LDB19Q12502 818 aa9.63□□□□□ -0.87
SMK1YPR054W MSB4Q12317 492 aa9.62□□□□□ -0.87
SMK1YPR054W CHD1P32657 1468 aa9.61□□□□□ -0.87
SMK1YPR054W MAK11P20484 414 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms