RNA–Protein interactions for RNA: YOL010W

RCL1, Transcript of Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis, yeastyeast

Gene RCL1, Length 1,104 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCL1YOL010W MTC1P47018 478 aaKnown RBP16.68■□□□□ 0.26
RCL1YOL010W FAP1P53971 965 aa16.13■□□□□ 0.17
RCL1YOL010W PRY3P47033 881 aa15.19■□□□□ 0.02
RCL1YOL010W DRS1P32892 752 aaKnown RBP14.69□□□□□ -0.06
RCL1YOL010W AAD16Q02895 342 aa14.61□□□□□ -0.07
RCL1YOL010W PRI1P10363 409 aa14.58□□□□□ -0.08
RCL1YOL010W YCK3P39962 524 aa14.27□□□□□ -0.13
RCL1YOL010W HAA1Q12753 694 aaKnown RBP14.14□□□□□ -0.15
RCL1YOL010W ISW2Q08773 1120 aa14.04□□□□□ -0.16
RCL1YOL010W RPG1P38249 964 aaKnown RBP13.94□□□□□ -0.18
RCL1YOL010W TSR3Q12094 313 aaKnown RBP13.77□□□□□ -0.21
RCL1YOL010W MRPL32P25348 183 aa13.22□□□□□ -0.29
RCL1YOL010W DIP2Q12220 943 aaPredicted RBP13.2□□□□□ -0.3
RCL1YOL010W RSE1Q04693 1361 aaKnown RBP13.02□□□□□ -0.33
RCL1YOL010W YGL015CP33199 130 aa12.91□□□□□ -0.34
RCL1YOL010W REB1P21538 810 aa12.72□□□□□ -0.37
RCL1YOL010W RPL17AP05740 184 aaKnown RBP12.68□□□□□ -0.38
RCL1YOL010W RPL17BP46990 184 aaKnown RBP12.68□□□□□ -0.38
RCL1YOL010W AVT3P36062 692 aa12.44□□□□□ -0.42
RCL1YOL010W CDC27P38042 758 aa12.4□□□□□ -0.42
RCL1YOL010W BUD31P25337 157 aaPredicted RBP12.24□□□□□ -0.45
RCL1YOL010W YKR023WP36119 530 aaKnown RBP12.12□□□□□ -0.47
RCL1YOL010W MAP2P38174 421 aaKnown RBP12.12□□□□□ -0.47
RCL1YOL010W UBP10P53874 792 aaPredicted RBP12.12□□□□□ -0.47
RCL1YOL010W SPT21P35209 758 aa12.03□□□□□ -0.48
RCL1YOL010W DCD1P06773 312 aa11.91□□□□□ -0.5
RCL1YOL010W HOP09932 586 aa11.91□□□□□ -0.5
RCL1YOL010W TFC8Q12308 588 aa11.87□□□□□ -0.51
RCL1YOL010W BFR2Q06631 534 aaKnown RBP11.77□□□□□ -0.53
RCL1YOL010W SCY1P53009 804 aa11.73□□□□□ -0.53
RCL1YOL010W TIF4632P39936 914 aaKnown RBP11.66□□□□□ -0.54
RCL1YOL010W SLX5P32828 619 aaKnown RBP11.61□□□□□ -0.55
RCL1YOL010W SIS1P25294 352 aaKnown RBP11.6□□□□□ -0.55
RCL1YOL010W TGL3P40308 642 aa11.59□□□□□ -0.55
RCL1YOL010W UBP9P39967 754 aa11.54□□□□□ -0.56
RCL1YOL010W BCH2P36122 765 aa11.45□□□□□ -0.58
RCL1YOL010W RIM101P33400 625 aa11.4□□□□□ -0.58
RCL1YOL010W INO80P53115 1489 aa11.32□□□□□ -0.6
RCL1YOL010W MON2P48563 1636 aaPredicted RBP11.32□□□□□ -0.6
RCL1YOL010W EPS1P40557 701 aa11.11□□□□□ -0.63
RCL1YOL010W BDF1P35817 686 aa11.08□□□□□ -0.64
RCL1YOL010W YBL029C-AQ3E756 94 aa11.03□□□□□ -0.64
RCL1YOL010W OXP1P28273 1286 aa11□□□□□ -0.65
RCL1YOL010W MST1P07236 462 aa10.98□□□□□ -0.65
RCL1YOL010W YOR238WQ08634 303 aa10.94□□□□□ -0.66
RCL1YOL010W PTP3P40048 928 aa10.92□□□□□ -0.66
RCL1YOL010W YIL055CP40523 627 aaKnown RBP10.86□□□□□ -0.67
RCL1YOL010W VNX1P42839 908 aa10.83□□□□□ -0.68
RCL1YOL010W NSR1P27476 414 aaKnown RBP RIP-Chip data10.79□□□□□ -0.68not detected
RCL1YOL010W DNA2P38859 1522 aa10.79□□□□□ -0.68
RCL1YOL010W BBC1P47068 1157 aa10.75□□□□□ -0.69
RCL1YOL010W SPP1Q03012 353 aa10.75□□□□□ -0.69
RCL1YOL010W YAP5P40574 245 aa10.74□□□□□ -0.69
RCL1YOL010W WSC3Q12215 556 aa10.74□□□□□ -0.69
RCL1YOL010W AI2P03876 854 aa10.68□□□□□ -0.7
RCL1YOL010W RSM7P47150 247 aa10.68□□□□□ -0.7
RCL1YOL010W YAH1Q12184 172 aaKnown RBP10.61□□□□□ -0.71
RCL1YOL010W AIR2Q12476 344 aaKnown RBP10.59□□□□□ -0.71
RCL1YOL010W SWR1Q05471 1514 aa10.58□□□□□ -0.72
RCL1YOL010W TIF11P38912 153 aaKnown RBP10.57□□□□□ -0.72
RCL1YOL010W YJL171CP46992 396 aa10.57□□□□□ -0.72
RCL1YOL010W GTT3P39996 337 aa10.56□□□□□ -0.72
RCL1YOL010W FKH1P40466 484 aa10.55□□□□□ -0.72
RCL1YOL010W KOG1P38873 1557 aa10.54□□□□□ -0.72
RCL1YOL010W LDB19Q12502 818 aa10.44□□□□□ -0.74
RCL1YOL010W PIB1Q06651 286 aa10.42□□□□□ -0.74
RCL1YOL010W ULI1P43604 169 aa10.4□□□□□ -0.74
RCL1YOL010W IOC2Q12072 812 aa10.35□□□□□ -0.75
RCL1YOL010W YLR271WQ06152 274 aa10.34□□□□□ -0.75
RCL1YOL010W BMT6Q12291 365 aa10.34□□□□□ -0.75
RCL1YOL010W PSD2P53037 1138 aaKnown RBP10.28□□□□□ -0.76
RCL1YOL010W MRM1P25270 412 aa10.26□□□□□ -0.77
RCL1YOL010W TY1B-DR4Q07793 1604 aa10.24□□□□□ -0.77
RCL1YOL010W MSB4Q12317 492 aa10.22□□□□□ -0.77
RCL1YOL010W TCB3Q03640 1545 aaKnown RBP10.21□□□□□ -0.78
RCL1YOL010W EAP1P36041 632 aaKnown RBP10.19□□□□□ -0.78
RCL1YOL010W RTG1P32607 177 aa10.16□□□□□ -0.78
RCL1YOL010W SET4P42948 560 aa10.16□□□□□ -0.78
RCL1YOL010W YOL036WQ08206 761 aa10.16□□□□□ -0.78
RCL1YOL010W TRP5P00931 707 aaKnown RBP10.12□□□□□ -0.79
RCL1YOL010W NCR1Q12200 1170 aa10.1□□□□□ -0.79
RCL1YOL010W SPA2P23201 1466 aaKnown RBP10.1□□□□□ -0.79
RCL1YOL010W YMR1P47147 688 aaKnown RBP RIP-Chip data10.06□□□□□ -0.8not detected
RCL1YOL010W DBP1P24784 617 aaKnown RBP10.04□□□□□ -0.8
RCL1YOL010W YFR006WP43590 535 aa10.04□□□□□ -0.8
RCL1YOL010W TFA1P36100 482 aa10.03□□□□□ -0.8
RCL1YOL010W YNL035CP53962 389 aaKnown RBP10.03□□□□□ -0.8
RCL1YOL010W SEC61P32915 480 aa10.01□□□□□ -0.81
RCL1YOL010W VPS29P38759 282 aa10.01□□□□□ -0.81
RCL1YOL010W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.01□□□□□ -0.81not detected
RCL1YOL010W VMA1P17255 1071 aaKnown RBP9.99□□□□□ -0.81
RCL1YOL010W SSP1P38871 571 aa9.96□□□□□ -0.82
RCL1YOL010W RTG3P38165 486 aa9.95□□□□□ -0.82
RCL1YOL010W STS1P38637 319 aa9.95□□□□□ -0.82
RCL1YOL010W CST9Q06032 482 aa9.95□□□□□ -0.82
RCL1YOL010W SAM3Q08986 587 aa9.93□□□□□ -0.82
RCL1YOL010W TFG1P41895 735 aaPredicted RBP9.92□□□□□ -0.82
RCL1YOL010W SAP30P38429 201 aa9.88□□□□□ -0.83
RCL1YOL010W DAN4P47179 1161 aa9.83□□□□□ -0.84
RCL1YOL010W MGA2P40578 1113 aa9.82□□□□□ -0.84
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms