RNA–Protein interactions for RNA: YNR040W

YNR040W, Transcript of Putative protein of unknown function, yeastyeast

Gene YNR040W, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNR040WYNR040W DRS1P32892 752 aaKnown RBP13.74□□□□□ -0.21
YNR040WYNR040W MTC1P47018 478 aaKnown RBP13.7□□□□□ -0.22
YNR040WYNR040W BFR2Q06631 534 aaKnown RBP11.84□□□□□ -0.51
YNR040WYNR040W DIP2Q12220 943 aaPredicted RBP11.7□□□□□ -0.54
YNR040WYNR040W AVT3P36062 692 aa11.52□□□□□ -0.57
YNR040WYNR040W FAP1P53971 965 aa11.39□□□□□ -0.59
YNR040WYNR040W ISW2Q08773 1120 aa11.14□□□□□ -0.63
YNR040WYNR040W RPG1P38249 964 aaKnown RBP11.06□□□□□ -0.64
YNR040WYNR040W PRI1P10363 409 aa11.05□□□□□ -0.64
YNR040WYNR040W RSE1Q04693 1361 aaKnown RBP11.03□□□□□ -0.64
YNR040WYNR040W TFA1P36100 482 aa11.03□□□□□ -0.64
YNR040WYNR040W AAD16Q02895 342 aa10.86□□□□□ -0.67
YNR040WYNR040W RPL17AP05740 184 aaKnown RBP10.68□□□□□ -0.7
YNR040WYNR040W RPL17BP46990 184 aaKnown RBP10.68□□□□□ -0.7
YNR040WYNR040W PRY3P47033 881 aa10.67□□□□□ -0.7
YNR040WYNR040W TSR3Q12094 313 aaKnown RBP10.56□□□□□ -0.72
YNR040WYNR040W REB1P21538 810 aa10.53□□□□□ -0.72
YNR040WYNR040W SPT21P35209 758 aa10.25□□□□□ -0.77
YNR040WYNR040W SGS1P35187 1447 aa10.21□□□□□ -0.78
YNR040WYNR040W YCK3P39962 524 aa10.1□□□□□ -0.79
YNR040WYNR040W MRPL32P25348 183 aa10.07□□□□□ -0.8
YNR040WYNR040W RIM101P33400 625 aa10.07□□□□□ -0.8
YNR040WYNR040W YKR023WP36119 530 aaKnown RBP9.96□□□□□ -0.82
YNR040WYNR040W HAA1Q12753 694 aaKnown RBP9.96□□□□□ -0.82
YNR040WYNR040W INO80P53115 1489 aa9.96□□□□□ -0.82
YNR040WYNR040W OXP1P28273 1286 aa9.81□□□□□ -0.84
YNR040WYNR040W HOP09932 586 aa9.8□□□□□ -0.84
YNR040WYNR040W TCB3Q03640 1545 aaKnown RBP9.78□□□□□ -0.84
YNR040WYNR040W CDC27P38042 758 aa9.78□□□□□ -0.84
YNR040WYNR040W PTP3P40048 928 aa9.78□□□□□ -0.84
YNR040WYNR040W DCD1P06773 312 aa9.77□□□□□ -0.85
YNR040WYNR040W SPA2P23201 1466 aaKnown RBP9.75□□□□□ -0.85
YNR040WYNR040W SSN2P38931 1420 aa9.74□□□□□ -0.85
YNR040WYNR040W TFC8Q12308 588 aa9.74□□□□□ -0.85
YNR040WYNR040W YAH1Q12184 172 aaKnown RBP9.7□□□□□ -0.86
YNR040WYNR040W YIL055CP40523 627 aaKnown RBP9.64□□□□□ -0.87
YNR040WYNR040W SSP1P38871 571 aa9.6□□□□□ -0.87
YNR040WYNR040W YLR271WQ06152 274 aa9.52□□□□□ -0.89
YNR040WYNR040W TY1B-DR4Q07793 1604 aa9.49□□□□□ -0.89
YNR040WYNR040W RSM7P47150 247 aa9.48□□□□□ -0.89
YNR040WYNR040W BCH2P36122 765 aa9.47□□□□□ -0.89
YNR040WYNR040W SPT6P23615 1451 aaKnown RBP9.44□□□□□ -0.9
YNR040WYNR040W MON2P48563 1636 aaPredicted RBP9.44□□□□□ -0.9
YNR040WYNR040W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.42□□□□□ -0.9not detected
YNR040WYNR040W HSL1P34244 1518 aa9.41□□□□□ -0.9
YNR040WYNR040W YGL015CP33199 130 aa9.37□□□□□ -0.91
YNR040WYNR040W MAP2P38174 421 aaKnown RBP9.37□□□□□ -0.91
YNR040WYNR040W SCY1P53009 804 aa9.35□□□□□ -0.91
YNR040WYNR040W SWR1Q05471 1514 aa9.35□□□□□ -0.91
YNR040WYNR040W AI2P03876 854 aa9.34□□□□□ -0.91
YNR040WYNR040W EPS1P40557 701 aa9.3□□□□□ -0.92
YNR040WYNR040W UBP10P53874 792 aaPredicted RBP9.28□□□□□ -0.92
YNR040WYNR040W XRN1P22147 1528 aaKnown RBP9.26□□□□□ -0.93
YNR040WYNR040W CST9Q06032 482 aa9.26□□□□□ -0.93
YNR040WYNR040W HIR3P47171 1648 aa9.26□□□□□ -0.93
YNR040WYNR040W MGA2P40578 1113 aa9.25□□□□□ -0.93
YNR040WYNR040W BBC1P47068 1157 aa9.25□□□□□ -0.93
YNR040WYNR040W PSD2P53037 1138 aaKnown RBP9.24□□□□□ -0.93
YNR040WYNR040W BDF1P35817 686 aa9.23□□□□□ -0.93
YNR040WYNR040W RQC2Q12532 1038 aaKnown RBP9.16□□□□□ -0.94
YNR040WYNR040W DMA1P38823 416 aa9.14□□□□□ -0.95
YNR040WYNR040W SLX5P32828 619 aaKnown RBP9.12□□□□□ -0.95
YNR040WYNR040W REV3P14284 1504 aa9.1□□□□□ -0.95
YNR040WYNR040W TAF2P23255 1407 aa9.08□□□□□ -0.96
YNR040WYNR040W MRM1P25270 412 aa9.08□□□□□ -0.96
YNR040WYNR040W DNA2P38859 1522 aa9.07□□□□□ -0.96
YNR040WYNR040W KOG1P38873 1557 aa9.04□□□□□ -0.96
YNR040WYNR040W SIN3P22579 1536 aa9□□□□□ -0.97
YNR040WYNR040W BUD4P47136 1447 aa8.99□□□□□ -0.97
YNR040WYNR040W THO2P53552 1597 aaKnown RBP8.99□□□□□ -0.97
YNR040WYNR040W ECM5Q03214 1411 aa8.97□□□□□ -0.97
YNR040WYNR040W RCR1P38212 213 aa8.96□□□□□ -0.98
YNR040WYNR040W SSK2P53599 1579 aa8.95□□□□□ -0.98
YNR040WYNR040W SKI3P17883 1432 aaKnown RBP8.94□□□□□ -0.98
YNR040WYNR040W TIF4632P39936 914 aaKnown RBP8.9□□□□□ -0.98
YNR040WYNR040W RTG3P38165 486 aa8.89□□□□□ -0.99
YNR040WYNR040W RAM2P29703 316 aa8.88□□□□□ -0.99
YNR040WYNR040W MYO2P19524 1574 aaKnown RBP8.86□□□□□ -0.99
YNR040WYNR040W TGL3P40308 642 aa8.83□□□□□ -1
YNR040WYNR040W YTA7P40340 1379 aa8.83□□□□□ -1
YNR040WYNR040W VPS29P38759 282 aa8.82□□□□□ -1
YNR040WYNR040W ESP1Q03018 1630 aa8.82□□□□□ -1
YNR040WYNR040W YPK9Q12697 1472 aa8.82□□□□□ -1
YNR040WYNR040W POL1P13382 1468 aa8.81□□□□□ -1
YNR040WYNR040W CHD1P32657 1468 aa8.79□□□□□ -1
YNR040WYNR040W ATG2P53855 1592 aa8.78□□□□□ -1
YNR040WYNR040W STU1P38198 1513 aa8.78□□□□□ -1
YNR040WYNR040W MDS3P53094 1487 aa8.77□□□□□ -1.01
YNR040WYNR040W MMS22Q06164 1454 aa8.77□□□□□ -1.01
YNR040WYNR040W SAS10Q12136 610 aaPredicted RBP8.76□□□□□ -1.01
YNR040WYNR040W YFR006WP43590 535 aa8.75□□□□□ -1.01
YNR040WYNR040W PIB1Q06651 286 aa8.74□□□□□ -1.01
YNR040WYNR040W STS1P38637 319 aa8.73□□□□□ -1.01
YNR040WYNR040W YMR1P47147 688 aaKnown RBP RIP-Chip data8.72□□□□□ -1.01not detected
YNR040WYNR040W YOR238WQ08634 303 aa8.72□□□□□ -1.01
YNR040WYNR040W PEP1P32319 1579 aa8.72□□□□□ -1.01
YNR040WYNR040W DBP1P24784 617 aaKnown RBP8.71□□□□□ -1.02
YNR040WYNR040W TAF7Q05021 590 aa8.7□□□□□ -1.02
YNR040WYNR040W SCC2Q04002 1493 aa8.7□□□□□ -1.02
YNR040WYNR040W MAK11P20484 414 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms