RNA–Protein interactions for RNA: YNL053W

MSG5, Transcript of Dual-specificity protein phosphatase, yeastyeast

Gene MSG5, Length 1,470 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSG5YNL053W MTC1P47018 478 aaKnown RBP14.04□□□□□ -0.16
MSG5YNL053W FAP1P53971 965 aa13.8□□□□□ -0.2
MSG5YNL053W PRY3P47033 881 aa13.02□□□□□ -0.33
MSG5YNL053W DRS1P32892 752 aaKnown RBP12.93□□□□□ -0.34
MSG5YNL053W AAD16Q02895 342 aa12.46□□□□□ -0.41
MSG5YNL053W PRI1P10363 409 aa12.4□□□□□ -0.42
MSG5YNL053W YCK3P39962 524 aa12.25□□□□□ -0.45
MSG5YNL053W HAA1Q12753 694 aaKnown RBP12.12□□□□□ -0.47
MSG5YNL053W SGS1P35187 1447 aa12.1□□□□□ -0.47
MSG5YNL053W ISW2Q08773 1120 aa11.85□□□□□ -0.51
MSG5YNL053W INO80P53115 1489 aa11.85□□□□□ -0.51
MSG5YNL053W RPG1P38249 964 aaKnown RBP11.8□□□□□ -0.52
MSG5YNL053W TSR3Q12094 313 aaKnown RBP11.7□□□□□ -0.54
MSG5YNL053W TCB3Q03640 1545 aaKnown RBP11.68□□□□□ -0.54
MSG5YNL053W SPA2P23201 1466 aaKnown RBP11.67□□□□□ -0.54
MSG5YNL053W SSN2P38931 1420 aa11.62□□□□□ -0.55
MSG5YNL053W TY1B-DR4Q07793 1604 aa11.55□□□□□ -0.56
MSG5YNL053W MON2P48563 1636 aaPredicted RBP11.43□□□□□ -0.58
MSG5YNL053W BFR2Q06631 534 aaKnown RBP11.43□□□□□ -0.58
MSG5YNL053W HSL1P34244 1518 aa11.38□□□□□ -0.59
MSG5YNL053W SPT6P23615 1451 aaKnown RBP11.33□□□□□ -0.6
MSG5YNL053W SWR1Q05471 1514 aa11.27□□□□□ -0.61
MSG5YNL053W MRPL32P25348 183 aa11.24□□□□□ -0.61
MSG5YNL053W HIR3P47171 1648 aa11.16□□□□□ -0.62
MSG5YNL053W TFA1P36100 482 aa11.11□□□□□ -0.63
MSG5YNL053W XRN1P22147 1528 aaKnown RBP11.1□□□□□ -0.63
MSG5YNL053W YGL015CP33199 130 aa11.05□□□□□ -0.64
MSG5YNL053W DIP2Q12220 943 aaPredicted RBP11□□□□□ -0.65
MSG5YNL053W REV3P14284 1504 aa10.99□□□□□ -0.65
MSG5YNL053W THO2P53552 1597 aaKnown RBP10.9□□□□□ -0.66
MSG5YNL053W RSE1Q04693 1361 aaKnown RBP10.9□□□□□ -0.66
MSG5YNL053W SIN3P22579 1536 aa10.89□□□□□ -0.67
MSG5YNL053W DNA2P38859 1522 aa10.88□□□□□ -0.67
MSG5YNL053W KOG1P38873 1557 aa10.86□□□□□ -0.67
MSG5YNL053W SSK2P53599 1579 aa10.84□□□□□ -0.67
MSG5YNL053W TAF2P23255 1407 aa10.84□□□□□ -0.67
MSG5YNL053W AVT3P36062 692 aa10.81□□□□□ -0.68
MSG5YNL053W BUD4P47136 1447 aa10.74□□□□□ -0.69
MSG5YNL053W ESP1Q03018 1630 aa10.74□□□□□ -0.69
MSG5YNL053W MYO2P19524 1574 aaKnown RBP10.73□□□□□ -0.69
MSG5YNL053W REB1P21538 810 aa10.68□□□□□ -0.7
MSG5YNL053W ATG2P53855 1592 aa10.68□□□□□ -0.7
MSG5YNL053W ECM5Q03214 1411 aa10.66□□□□□ -0.7
MSG5YNL053W RPL17AP05740 184 aaKnown RBP10.64□□□□□ -0.71
MSG5YNL053W RPL17BP46990 184 aaKnown RBP10.64□□□□□ -0.71
MSG5YNL053W SKI3P17883 1432 aaKnown RBP10.63□□□□□ -0.71
MSG5YNL053W MDS3P53094 1487 aa10.57□□□□□ -0.72
MSG5YNL053W YPK9Q12697 1472 aa10.55□□□□□ -0.72
MSG5YNL053W BUD31P25337 157 aaPredicted RBP10.55□□□□□ -0.72
MSG5YNL053W PEP1P32319 1579 aa10.53□□□□□ -0.72
MSG5YNL053W POL1P13382 1468 aa10.53□□□□□ -0.72
MSG5YNL053W STU1P38198 1513 aa10.52□□□□□ -0.73
MSG5YNL053W MMS22Q06164 1454 aa10.5□□□□□ -0.73
MSG5YNL053W CDC27P38042 758 aa10.49□□□□□ -0.73
MSG5YNL053W CHD1P32657 1468 aa10.48□□□□□ -0.73
MSG5YNL053W SCC2Q04002 1493 aa10.46□□□□□ -0.73
MSG5YNL053W RKR1Q04781 1562 aa10.45□□□□□ -0.74
MSG5YNL053W BPT1P14772 1559 aa10.42□□□□□ -0.74
MSG5YNL053W YOR1P53049 1477 aa10.39□□□□□ -0.75
MSG5YNL053W YTA7P40340 1379 aa10.38□□□□□ -0.75
MSG5YNL053W RPO31P04051 1460 aa10.38□□□□□ -0.75
MSG5YNL053W UFD4P33202 1483 aa10.35□□□□□ -0.75
MSG5YNL053W YCF1P39109 1515 aaKnown RBP10.32□□□□□ -0.76
MSG5YNL053W TOP2P06786 1428 aaKnown RBP10.32□□□□□ -0.76
MSG5YNL053W MYO4P32492 1471 aa10.3□□□□□ -0.76
MSG5YNL053W SMC4Q12267 1418 aa10.29□□□□□ -0.76
MSG5YNL053W MAP2P38174 421 aaKnown RBP10.29□□□□□ -0.76
MSG5YNL053W SAS10Q12136 610 aaPredicted RBP10.29□□□□□ -0.76
MSG5YNL053W TY2B-LR1P0C2J3 1770 aa10.28□□□□□ -0.76
MSG5YNL053W TY2B-FP0CX63 1770 aa10.28□□□□□ -0.76
MSG5YNL053W TY2B-GR2P0CX64 1770 aa10.28□□□□□ -0.76
MSG5YNL053W TY2B-CP25384 1770 aa10.28□□□□□ -0.76
MSG5YNL053W TY2B-DR2Q03494 1770 aa10.28□□□□□ -0.76
MSG5YNL053W TY1B-DR1Q03855 1755 aa10.28□□□□□ -0.76
MSG5YNL053W TY2B-DR3Q07791 1770 aaKnown RBP10.28□□□□□ -0.76
MSG5YNL053W TY2B-OR1Q12113 1770 aa10.28□□□□□ -0.76
MSG5YNL053W TY2B-DR1Q12472 1770 aa10.28□□□□□ -0.76
MSG5YNL053W TY2B-OR2Q12501 1770 aa10.28□□□□□ -0.76
MSG5YNL053W UBP10P53874 792 aaPredicted RBP10.28□□□□□ -0.76
MSG5YNL053W TY1B-DR3Q99231 1755 aa10.24□□□□□ -0.77
MSG5YNL053W YKR023WP36119 530 aaKnown RBP10.22□□□□□ -0.77
MSG5YNL053W TY2B-BQ12491 1770 aa10.2□□□□□ -0.78
MSG5YNL053W SNQ2P32568 1501 aaKnown RBP10.18□□□□□ -0.78
MSG5YNL053W RQC2Q12532 1038 aaKnown RBP10.14□□□□□ -0.79
MSG5YNL053W STH1P32597 1359 aa10.13□□□□□ -0.79
MSG5YNL053W MLP2P40457 1679 aa10.13□□□□□ -0.79
MSG5YNL053W SPP41P38904 1435 aa10.11□□□□□ -0.79
MSG5YNL053W TY1B-HO13535 1793 aa10.11□□□□□ -0.79
MSG5YNL053W TY1B-DR5P0C2I2 1755 aa10.11□□□□□ -0.79
MSG5YNL053W TY1B-DR6P0C2I3 1755 aa10.11□□□□□ -0.79
MSG5YNL053W TY1B-LR2P0C2I5 1755 aa10.11□□□□□ -0.79
MSG5YNL053W TY1B-LR3P0C2I6 1755 aaKnown RBP10.11□□□□□ -0.79
MSG5YNL053W TY1B-PR1P0C2I9 1755 aaKnown RBP10.11□□□□□ -0.79
MSG5YNL053W TY1B-PR2P0C2J0 1756 aa10.11□□□□□ -0.79
MSG5YNL053W TY1B-PR3P0C2J1 1755 aaKnown RBP10.11□□□□□ -0.79
MSG5YNL053W TY1B-JR1P47098 1755 aa10.11□□□□□ -0.79
MSG5YNL053W TY1B-ML2Q03434 1755 aaKnown RBP10.11□□□□□ -0.79
MSG5YNL053W TY1B-ER1Q03612 1755 aa10.11□□□□□ -0.79
MSG5YNL053W TY1B-ML1Q04711 1755 aaKnown RBP10.11□□□□□ -0.79
MSG5YNL053W TY1B-BRQ12193 1756 aa10.11□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms