RNA–Protein interactions for RNA: YNL006W

LST8, Transcript of Protein required for the transport of Gap1p, yeastyeast

Gene LST8, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LST8YNL006W MTC1P47018 478 aaKnown RBP12.74□□□□□ -0.37
LST8YNL006W FAP1P53971 965 aa11.74□□□□□ -0.53
LST8YNL006W DRS1P32892 752 aaKnown RBP11.69□□□□□ -0.54
LST8YNL006W MON2P48563 1636 aaPredicted RBP11.46□□□□□ -0.58
LST8YNL006W INO80P53115 1489 aa11.32□□□□□ -0.6
LST8YNL006W PRY3P47033 881 aa11.07□□□□□ -0.64
LST8YNL006W TY1B-DR4Q07793 1604 aa11.04□□□□□ -0.64
LST8YNL006W SWR1Q05471 1514 aa10.99□□□□□ -0.65
LST8YNL006W TCB3Q03640 1545 aaKnown RBP10.98□□□□□ -0.65
LST8YNL006W SGS1P35187 1447 aa10.94□□□□□ -0.66
LST8YNL006W PRI1P10363 409 aa10.92□□□□□ -0.66
LST8YNL006W AAD16Q02895 342 aa10.87□□□□□ -0.67
LST8YNL006W DNA2P38859 1522 aa10.87□□□□□ -0.67
LST8YNL006W KOG1P38873 1557 aa10.72□□□□□ -0.69
LST8YNL006W HSL1P34244 1518 aa10.68□□□□□ -0.7
LST8YNL006W SPT6P23615 1451 aaKnown RBP10.62□□□□□ -0.71
LST8YNL006W ISW2Q08773 1120 aa10.58□□□□□ -0.72
LST8YNL006W YCK3P39962 524 aa10.57□□□□□ -0.72
LST8YNL006W RPG1P38249 964 aaKnown RBP10.49□□□□□ -0.73
LST8YNL006W SPA2P23201 1466 aaKnown RBP10.49□□□□□ -0.73
LST8YNL006W HIR3P47171 1648 aa10.47□□□□□ -0.73
LST8YNL006W HAA1Q12753 694 aaKnown RBP10.38□□□□□ -0.75
LST8YNL006W TSR3Q12094 313 aaKnown RBP10.29□□□□□ -0.76
LST8YNL006W BFR2Q06631 534 aaKnown RBP10.28□□□□□ -0.76
LST8YNL006W XRN1P22147 1528 aaKnown RBP10.26□□□□□ -0.77
LST8YNL006W THO2P53552 1597 aaKnown RBP10.26□□□□□ -0.77
LST8YNL006W DIP2Q12220 943 aaPredicted RBP10.25□□□□□ -0.77
LST8YNL006W ECM5Q03214 1411 aa10.24□□□□□ -0.77
LST8YNL006W RSE1Q04693 1361 aaKnown RBP10.23□□□□□ -0.77
LST8YNL006W SSN2P38931 1420 aa10.23□□□□□ -0.77
LST8YNL006W BUD4P47136 1447 aa10.21□□□□□ -0.78
LST8YNL006W MDS3P53094 1487 aa10.15□□□□□ -0.78
LST8YNL006W REV3P14284 1504 aa10.12□□□□□ -0.79
LST8YNL006W ATG2P53855 1592 aa10.1□□□□□ -0.79
LST8YNL006W PEP1P32319 1579 aa10.09□□□□□ -0.79
LST8YNL006W SIN3P22579 1536 aa10□□□□□ -0.81
LST8YNL006W TFA1P36100 482 aa9.98□□□□□ -0.81
LST8YNL006W SSK2P53599 1579 aa9.96□□□□□ -0.82
LST8YNL006W TAF2P23255 1407 aa9.95□□□□□ -0.82
LST8YNL006W ESP1Q03018 1630 aa9.91□□□□□ -0.82
LST8YNL006W SKI3P17883 1432 aaKnown RBP9.86□□□□□ -0.83
LST8YNL006W MRPL32P25348 183 aa9.86□□□□□ -0.83
LST8YNL006W BPT1P14772 1559 aa9.84□□□□□ -0.83
LST8YNL006W AVT3P36062 692 aa9.83□□□□□ -0.84
LST8YNL006W MYO2P19524 1574 aaKnown RBP9.75□□□□□ -0.85
LST8YNL006W SCC2Q04002 1493 aa9.71□□□□□ -0.86
LST8YNL006W RPL17AP05740 184 aaKnown RBP9.69□□□□□ -0.86
LST8YNL006W TY2B-LR1P0C2J3 1770 aa9.69□□□□□ -0.86
LST8YNL006W TY2B-FP0CX63 1770 aa9.69□□□□□ -0.86
LST8YNL006W TY2B-GR2P0CX64 1770 aa9.69□□□□□ -0.86
LST8YNL006W TY2B-CP25384 1770 aa9.69□□□□□ -0.86
LST8YNL006W RPL17BP46990 184 aaKnown RBP9.69□□□□□ -0.86
LST8YNL006W TY2B-DR2Q03494 1770 aa9.69□□□□□ -0.86
LST8YNL006W TY1B-DR1Q03855 1755 aa9.69□□□□□ -0.86
LST8YNL006W TY2B-DR3Q07791 1770 aaKnown RBP9.69□□□□□ -0.86
LST8YNL006W TY2B-OR1Q12113 1770 aa9.69□□□□□ -0.86
LST8YNL006W TY2B-DR1Q12472 1770 aa9.69□□□□□ -0.86
LST8YNL006W TY2B-OR2Q12501 1770 aa9.69□□□□□ -0.86
LST8YNL006W YPK9Q12697 1472 aa9.69□□□□□ -0.86
LST8YNL006W YCF1P39109 1515 aaKnown RBP9.68□□□□□ -0.86
LST8YNL006W UFD4P33202 1483 aa9.68□□□□□ -0.86
LST8YNL006W REB1P21538 810 aa9.64□□□□□ -0.87
LST8YNL006W TY1B-BRQ12193 1756 aa9.61□□□□□ -0.87
LST8YNL006W TY1B-GR3Q12316 1755 aa9.61□□□□□ -0.87
LST8YNL006W TY1B-ORQ92393 1755 aa9.61□□□□□ -0.87
LST8YNL006W RPO31P04051 1460 aa9.59□□□□□ -0.87
LST8YNL006W ESC1Q03661 1658 aaKnown RBP9.58□□□□□ -0.88
LST8YNL006W TY2B-BQ12491 1770 aa9.58□□□□□ -0.88
LST8YNL006W TY1B-DR3Q99231 1755 aa9.58□□□□□ -0.88
LST8YNL006W CDC25P04821 1589 aa9.56□□□□□ -0.88
LST8YNL006W YGL015CP33199 130 aa9.54□□□□□ -0.88
LST8YNL006W TY1B-HO13535 1793 aa9.54□□□□□ -0.88
LST8YNL006W TY1B-DR5P0C2I2 1755 aa9.54□□□□□ -0.88
LST8YNL006W TY1B-DR6P0C2I3 1755 aa9.54□□□□□ -0.88
LST8YNL006W TY1B-LR2P0C2I5 1755 aa9.54□□□□□ -0.88
LST8YNL006W TY1B-LR3P0C2I6 1755 aaKnown RBP9.54□□□□□ -0.88
LST8YNL006W TY1B-PR1P0C2I9 1755 aaKnown RBP9.54□□□□□ -0.88
LST8YNL006W TY1B-PR2P0C2J0 1756 aa9.54□□□□□ -0.88
LST8YNL006W TY1B-PR3P0C2J1 1755 aaKnown RBP9.54□□□□□ -0.88
LST8YNL006W TY1B-JR1P47098 1755 aa9.54□□□□□ -0.88
LST8YNL006W TY1B-ML2Q03434 1755 aaKnown RBP9.54□□□□□ -0.88
LST8YNL006W TY1B-ER1Q03612 1755 aa9.54□□□□□ -0.88
LST8YNL006W TY1B-ML1Q04711 1755 aaKnown RBP9.54□□□□□ -0.88
LST8YNL006W TY1B-GR2Q12269 1755 aa9.54□□□□□ -0.88
LST8YNL006W TY1B-OLQ12273 1755 aa9.54□□□□□ -0.88
LST8YNL006W TY1B-PLQ12414 1755 aaKnown RBP9.54□□□□□ -0.88
LST8YNL006W RKR1Q04781 1562 aa9.52□□□□□ -0.89
LST8YNL006W DNF1P32660 1571 aa9.5□□□□□ -0.89
LST8YNL006W CHD1P32657 1468 aa9.48□□□□□ -0.89
LST8YNL006W RPA190P10964 1664 aaKnown RBP9.46□□□□□ -0.89
LST8YNL006W POL1P13382 1468 aa9.46□□□□□ -0.9
LST8YNL006W TOP2P06786 1428 aaKnown RBP9.45□□□□□ -0.9
LST8YNL006W STU1P38198 1513 aa9.41□□□□□ -0.9
LST8YNL006W PAN1P32521 1480 aa9.4□□□□□ -0.9
LST8YNL006W RQC2Q12532 1038 aaKnown RBP9.38□□□□□ -0.91
LST8YNL006W YOR1P53049 1477 aa9.38□□□□□ -0.91
LST8YNL006W CDC27P38042 758 aa9.37□□□□□ -0.91
LST8YNL006W TY1B-JR2P47100 1755 aaKnown RBP9.35□□□□□ -0.91
LST8YNL006W TY1B-ER2Q03619 1755 aa9.35□□□□□ -0.91
LST8YNL006W TY1B-MR1Q04214 1755 aa9.35□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 38.9 ms