RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeastyeast

Gene SWD2, Length 990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD2YKL018W FAP1P53971 965 aa15.84■□□□□ 0.13
SWD2YKL018W MTC1P47018 478 aaKnown RBP15.52■□□□□ 0.08
SWD2YKL018W PRY3P47033 881 aa14.94□□□□□ -0.02
SWD2YKL018W AAD16Q02895 342 aa14.15□□□□□ -0.14
SWD2YKL018W YCK3P39962 524 aa14.03□□□□□ -0.16
SWD2YKL018W PRI1P10363 409 aa14.02□□□□□ -0.17
SWD2YKL018W HAA1Q12753 694 aaKnown RBP13.98□□□□□ -0.17
SWD2YKL018W DRS1P32892 752 aaKnown RBP13.61□□□□□ -0.23
SWD2YKL018W ISW2Q08773 1120 aa13.26□□□□□ -0.29
SWD2YKL018W TSR3Q12094 313 aaKnown RBP13.11□□□□□ -0.31
SWD2YKL018W RPG1P38249 964 aaKnown RBP13.1□□□□□ -0.31
SWD2YKL018W MRPL32P25348 183 aa12.66□□□□□ -0.38
SWD2YKL018W YGL015CP33199 130 aa12.63□□□□□ -0.39
SWD2YKL018W BUD31P25337 157 aaPredicted RBP12.33□□□□□ -0.44
SWD2YKL018W RSE1Q04693 1361 aaKnown RBP11.92□□□□□ -0.5
SWD2YKL018W DIP2Q12220 943 aaPredicted RBP11.8□□□□□ -0.52
SWD2YKL018W REB1P21538 810 aa11.75□□□□□ -0.53
SWD2YKL018W CDC27P38042 758 aa11.68□□□□□ -0.54
SWD2YKL018W UBP10P53874 792 aaPredicted RBP11.67□□□□□ -0.54
SWD2YKL018W RPL17AP05740 184 aaKnown RBP11.62□□□□□ -0.55
SWD2YKL018W RPL17BP46990 184 aaKnown RBP11.62□□□□□ -0.55
SWD2YKL018W SIS1P25294 352 aaKnown RBP11.55□□□□□ -0.56
SWD2YKL018W MAP2P38174 421 aaKnown RBP11.53□□□□□ -0.56
SWD2YKL018W BFR2Q06631 534 aaKnown RBP11.5□□□□□ -0.57
SWD2YKL018W AVT3P36062 692 aa11.37□□□□□ -0.59
SWD2YKL018W UBP9P39967 754 aa11.35□□□□□ -0.59
SWD2YKL018W YKR023WP36119 530 aaKnown RBP11.25□□□□□ -0.61
SWD2YKL018W TIF4632P39936 914 aaKnown RBP11.2□□□□□ -0.62
SWD2YKL018W TGL3P40308 642 aa11.16□□□□□ -0.62
SWD2YKL018W TFC8Q12308 588 aa11.04□□□□□ -0.64
SWD2YKL018W SPT21P35209 758 aa11.02□□□□□ -0.65
SWD2YKL018W HOP09932 586 aa11□□□□□ -0.65
SWD2YKL018W SLX5P32828 619 aaKnown RBP11□□□□□ -0.65
SWD2YKL018W SCY1P53009 804 aa11□□□□□ -0.65
SWD2YKL018W DCD1P06773 312 aa10.98□□□□□ -0.65
SWD2YKL018W BCH2P36122 765 aa10.59□□□□□ -0.71
SWD2YKL018W YBL029C-AQ3E756 94 aa10.56□□□□□ -0.72
SWD2YKL018W MST1P07236 462 aa10.5□□□□□ -0.73
SWD2YKL018W VNX1P42839 908 aa10.38□□□□□ -0.75
SWD2YKL018W YOR238WQ08634 303 aa10.36□□□□□ -0.75
SWD2YKL018W TFA1P36100 482 aa10.29□□□□□ -0.76
SWD2YKL018W SPP1Q03012 353 aa10.29□□□□□ -0.76
SWD2YKL018W YJL171CP46992 396 aa10.28□□□□□ -0.76
SWD2YKL018W AIR2Q12476 344 aaKnown RBP10.27□□□□□ -0.77
SWD2YKL018W RIM101P33400 625 aa10.26□□□□□ -0.77
SWD2YKL018W NSR1P27476 414 aaKnown RBP RIP-Chip data10.23□□□□□ -0.77not detected
SWD2YKL018W EPS1P40557 701 aa10.23□□□□□ -0.77
SWD2YKL018W BDF1P35817 686 aa10.22□□□□□ -0.77
SWD2YKL018W FKH1P40466 484 aa10.21□□□□□ -0.77
SWD2YKL018W WSC3Q12215 556 aa10.11□□□□□ -0.79
SWD2YKL018W TIF11P38912 153 aaKnown RBP10.09□□□□□ -0.79
SWD2YKL018W YAP5P40574 245 aa10.07□□□□□ -0.8
SWD2YKL018W BMT6Q12291 365 aa10□□□□□ -0.81
SWD2YKL018W LDB19Q12502 818 aa9.94□□□□□ -0.82
SWD2YKL018W GTT3P39996 337 aa9.9□□□□□ -0.82
SWD2YKL018W IOC2Q12072 812 aa9.84□□□□□ -0.83
SWD2YKL018W ULI1P43604 169 aa9.83□□□□□ -0.84
SWD2YKL018W OXP1P28273 1286 aa9.82□□□□□ -0.84
SWD2YKL018W YIL055CP40523 627 aaKnown RBP9.79□□□□□ -0.84
SWD2YKL018W BBC1P47068 1157 aa9.78□□□□□ -0.84
SWD2YKL018W PTP3P40048 928 aa9.77□□□□□ -0.85
SWD2YKL018W YAH1Q12184 172 aaKnown RBP9.66□□□□□ -0.86
SWD2YKL018W MSB4Q12317 492 aa9.64□□□□□ -0.87
SWD2YKL018W EAP1P36041 632 aaKnown RBP9.63□□□□□ -0.87
SWD2YKL018W AI2P03876 854 aa9.62□□□□□ -0.87
SWD2YKL018W RTG1P32607 177 aa9.59□□□□□ -0.87
SWD2YKL018W RSM7P47150 247 aa9.58□□□□□ -0.88
SWD2YKL018W NCR1Q12200 1170 aa9.57□□□□□ -0.88
SWD2YKL018W PIB1Q06651 286 aa9.51□□□□□ -0.89
SWD2YKL018W SEC61P32915 480 aa9.49□□□□□ -0.89
SWD2YKL018W BCK2P33306 851 aa9.49□□□□□ -0.89
SWD2YKL018W TRP5P00931 707 aaKnown RBP9.47□□□□□ -0.89
SWD2YKL018W YNL035CP53962 389 aaKnown RBP9.46□□□□□ -0.9
SWD2YKL018W SSP1P38871 571 aa9.44□□□□□ -0.9
SWD2YKL018W YOL036WQ08206 761 aa9.43□□□□□ -0.9
SWD2YKL018W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.42□□□□□ -0.9not detected
SWD2YKL018W SET4P42948 560 aa9.41□□□□□ -0.9
SWD2YKL018W YLR271WQ06152 274 aa9.41□□□□□ -0.9
SWD2YKL018W RGA2Q06407 1009 aa9.37□□□□□ -0.91
SWD2YKL018W TFG1P41895 735 aaPredicted RBP9.36□□□□□ -0.91
SWD2YKL018W CHL1P22516 861 aaPredicted RBP9.33□□□□□ -0.92
SWD2YKL018W SAP30P38429 201 aa9.29□□□□□ -0.92
SWD2YKL018W PRE3P38624 215 aa9.23□□□□□ -0.93
SWD2YKL018W PSD2P53037 1138 aaKnown RBP9.21□□□□□ -0.94
SWD2YKL018W YDL129WQ07555 291 aa9.21□□□□□ -0.94
SWD2YKL018W MRM1P25270 412 aa9.18□□□□□ -0.94
SWD2YKL018W DAN4P47179 1161 aa9.18□□□□□ -0.94
SWD2YKL018W JIP4Q03361 876 aa9.18□□□□□ -0.94
SWD2YKL018W XDJ1P39102 459 aa9.17□□□□□ -0.94
SWD2YKL018W MGA2P40578 1113 aa9.17□□□□□ -0.94
SWD2YKL018W SAM3Q08986 587 aa9.16□□□□□ -0.94
SWD2YKL018W VMA1P17255 1071 aaKnown RBP9.14□□□□□ -0.95
SWD2YKL018W YMR1P47147 688 aaKnown RBP RIP-Chip data9.13□□□□□ -0.95not detected
SWD2YKL018W DBP1P24784 617 aaKnown RBP9.1□□□□□ -0.95
SWD2YKL018W CST9Q06032 482 aa9.1□□□□□ -0.95
SWD2YKL018W ABP1P15891 592 aaKnown RBP9.07□□□□□ -0.96
SWD2YKL018W DPS1P04802 557 aaKnown RBP9.06□□□□□ -0.96
SWD2YKL018W VRP1P37370 817 aa9.06□□□□□ -0.96
SWD2YKL018W RGA1P39083 1007 aa9.04□□□□□ -0.96
SWD2YKL018W YFR006WP43590 535 aa9.01□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms