RNA–Protein interactions for RNA: YJR093C

FIP1, Transcript of Subunit of cleavage polyadenylation factor (CPF), yeastyeast

Gene FIP1, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FIP1YJR093C MTC1P47018 478 aaKnown RBP18.65■□□□□ 0.58
FIP1YJR093C FAP1P53971 965 aa18.28■□□□□ 0.52
FIP1YJR093C PRY3P47033 881 aa17.29■□□□□ 0.36
FIP1YJR093C AAD16Q02895 342 aa16.57■□□□□ 0.24
FIP1YJR093C PRI1P10363 409 aa16.53■□□□□ 0.24
FIP1YJR093C YCK3P39962 524 aa16.52■□□□□ 0.24
FIP1YJR093C HAA1Q12753 694 aaKnown RBP16.1■□□□□ 0.17
FIP1YJR093C DRS1P32892 752 aaKnown RBP16.02■□□□□ 0.16
FIP1YJR093C ISW2Q08773 1120 aa15.67■□□□□ 0.1
FIP1YJR093C RPG1P38249 964 aaKnown RBP15.65■□□□□ 0.1
FIP1YJR093C TSR3Q12094 313 aaKnown RBP15.58■□□□□ 0.08
FIP1YJR093C MRPL32P25348 183 aa14.86□□□□□ -0.03
FIP1YJR093C YGL015CP33199 130 aa14.64□□□□□ -0.07
FIP1YJR093C DIP2Q12220 943 aaPredicted RBP14.57□□□□□ -0.08
FIP1YJR093C RSE1Q04693 1361 aaKnown RBP14.43□□□□□ -0.1
FIP1YJR093C RPL17AP05740 184 aaKnown RBP14.1□□□□□ -0.15
FIP1YJR093C RPL17BP46990 184 aaKnown RBP14.1□□□□□ -0.15
FIP1YJR093C REB1P21538 810 aa14.08□□□□□ -0.16
FIP1YJR093C BUD31P25337 157 aaPredicted RBP14.08□□□□□ -0.16
FIP1YJR093C CDC27P38042 758 aa14.03□□□□□ -0.16
FIP1YJR093C AVT3P36062 692 aa13.71□□□□□ -0.21
FIP1YJR093C MAP2P38174 421 aaKnown RBP13.7□□□□□ -0.22
FIP1YJR093C YKR023WP36119 530 aaKnown RBP13.66□□□□□ -0.22
FIP1YJR093C UBP10P53874 792 aaPredicted RBP13.65□□□□□ -0.22
FIP1YJR093C SPT21P35209 758 aa13.47□□□□□ -0.25
FIP1YJR093C DCD1P06773 312 aa13.36□□□□□ -0.27
FIP1YJR093C HOP09932 586 aa13.35□□□□□ -0.27
FIP1YJR093C TFC8Q12308 588 aa13.32□□□□□ -0.28
FIP1YJR093C SIS1P25294 352 aaKnown RBP13.21□□□□□ -0.29
FIP1YJR093C SCY1P53009 804 aa13.15□□□□□ -0.3
FIP1YJR093C TGL3P40308 642 aa13.09□□□□□ -0.31
FIP1YJR093C TIF4632P39936 914 aaKnown RBP13.04□□□□□ -0.32
FIP1YJR093C UBP9P39967 754 aa13.01□□□□□ -0.33
FIP1YJR093C SLX5P32828 619 aaKnown RBP12.99□□□□□ -0.33
FIP1YJR093C BCH2P36122 765 aa12.86□□□□□ -0.35
FIP1YJR093C RIM101P33400 625 aa12.67□□□□□ -0.38
FIP1YJR093C BFR2Q06631 534 aaKnown RBP12.62□□□□□ -0.39
FIP1YJR093C YBL029C-AQ3E756 94 aa12.45□□□□□ -0.42
FIP1YJR093C MST1P07236 462 aa12.44□□□□□ -0.42
FIP1YJR093C BDF1P35817 686 aa12.4□□□□□ -0.42
FIP1YJR093C EPS1P40557 701 aa12.39□□□□□ -0.43
FIP1YJR093C OXP1P28273 1286 aa12.26□□□□□ -0.45
FIP1YJR093C VNX1P42839 908 aa12.25□□□□□ -0.45
FIP1YJR093C YOR238WQ08634 303 aa12.25□□□□□ -0.45
FIP1YJR093C NSR1P27476 414 aaKnown RBP RIP-Chip data12.09□□□□□ -0.47not detected
FIP1YJR093C SPP1Q03012 353 aa12.08□□□□□ -0.48
FIP1YJR093C AIR2Q12476 344 aaKnown RBP12.04□□□□□ -0.48
FIP1YJR093C WSC3Q12215 556 aa12.02□□□□□ -0.49
FIP1YJR093C PTP3P40048 928 aa11.97□□□□□ -0.49
FIP1YJR093C YAP5P40574 245 aa11.96□□□□□ -0.49
FIP1YJR093C FKH1P40466 484 aa11.94□□□□□ -0.5
FIP1YJR093C YIL055CP40523 627 aaKnown RBP11.89□□□□□ -0.51
FIP1YJR093C TIF11P38912 153 aaKnown RBP11.88□□□□□ -0.51
FIP1YJR093C YJL171CP46992 396 aa11.85□□□□□ -0.51
FIP1YJR093C AI2P03876 854 aa11.82□□□□□ -0.52
FIP1YJR093C BBC1P47068 1157 aa11.81□□□□□ -0.52
FIP1YJR093C RSM7P47150 247 aa11.81□□□□□ -0.52
FIP1YJR093C LDB19Q12502 818 aa11.72□□□□□ -0.53
FIP1YJR093C IOC2Q12072 812 aa11.71□□□□□ -0.53
FIP1YJR093C GTT3P39996 337 aa11.68□□□□□ -0.54
FIP1YJR093C ULI1P43604 169 aa11.66□□□□□ -0.54
FIP1YJR093C BMT6Q12291 365 aa11.62□□□□□ -0.55
FIP1YJR093C YAH1Q12184 172 aaKnown RBP11.61□□□□□ -0.55
FIP1YJR093C PIB1Q06651 286 aa11.6□□□□□ -0.55
FIP1YJR093C YLR271WQ06152 274 aa11.42□□□□□ -0.58
FIP1YJR093C PSD2P53037 1138 aaKnown RBP11.4□□□□□ -0.58
FIP1YJR093C RTG1P32607 177 aa11.39□□□□□ -0.59
FIP1YJR093C MSB4Q12317 492 aa11.38□□□□□ -0.59
FIP1YJR093C TRP5P00931 707 aaKnown RBP11.34□□□□□ -0.59
FIP1YJR093C YOL036WQ08206 761 aa11.33□□□□□ -0.6
FIP1YJR093C NCR1Q12200 1170 aa11.33□□□□□ -0.6
FIP1YJR093C MRM1P25270 412 aa11.32□□□□□ -0.6
FIP1YJR093C EAP1P36041 632 aaKnown RBP11.32□□□□□ -0.6
FIP1YJR093C SET4P42948 560 aa11.32□□□□□ -0.6
FIP1YJR093C YNL035CP53962 389 aaKnown RBP11.22□□□□□ -0.61
FIP1YJR093C SEC61P32915 480 aa11.2□□□□□ -0.62
FIP1YJR093C VPS29P38759 282 aa11.16□□□□□ -0.62
FIP1YJR093C DBP1P24784 617 aaKnown RBP11.14□□□□□ -0.63
FIP1YJR093C YFR006WP43590 535 aa11.13□□□□□ -0.63
FIP1YJR093C VMA1P17255 1071 aaKnown RBP11.11□□□□□ -0.63
FIP1YJR093C YMR1P47147 688 aaKnown RBP RIP-Chip data11.11□□□□□ -0.63not detected
FIP1YJR093C SAM3Q08986 587 aa11.09□□□□□ -0.63
FIP1YJR093C STS1P38637 319 aa11.08□□□□□ -0.64
FIP1YJR093C DAN4P47179 1161 aa11.06□□□□□ -0.64
FIP1YJR093C SAP30P38429 201 aa11.05□□□□□ -0.64
FIP1YJR093C BCK2P33306 851 aa11.03□□□□□ -0.64
FIP1YJR093C TFG1P41895 735 aaPredicted RBP10.97□□□□□ -0.65
FIP1YJR093C CST9Q06032 482 aa10.96□□□□□ -0.65
FIP1YJR093C CHL1P22516 861 aaPredicted RBP10.95□□□□□ -0.66
FIP1YJR093C TFA1P36100 482 aa10.93□□□□□ -0.66
FIP1YJR093C RTG3P38165 486 aa10.93□□□□□ -0.66
FIP1YJR093C YDL129WQ07555 291 aa10.93□□□□□ -0.66
FIP1YJR093C JIP4Q03361 876 aa10.9□□□□□ -0.66
FIP1YJR093C PRE3P38624 215 aa10.89□□□□□ -0.67
FIP1YJR093C RCR1P38212 213 aa10.87□□□□□ -0.67
FIP1YJR093C SSP1P38871 571 aa10.83□□□□□ -0.68
FIP1YJR093C YDR344CQ05510 147 aa10.83□□□□□ -0.68
FIP1YJR093C GYP5Q12344 894 aa10.83□□□□□ -0.68
FIP1YJR093C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.81□□□□□ -0.68not detected
FIP1YJR093C DCW1P36091 449 aa10.79□□□□□ -0.68
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms