RNA–Protein interactions for RNA: YJL172W

CPS1, Transcript of Vacuolar carboxypeptidase S, yeastyeast

Gene CPS1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPS1YJL172W DRS1P32892 752 aaKnown RBP9.34□□□□□ -0.91
CPS1YJL172W MTC1P47018 478 aaKnown RBP9.07□□□□□ -0.96
CPS1YJL172W SGS1P35187 1447 aa8.25□□□□□ -1.09
CPS1YJL172W INO80P53115 1489 aa8.24□□□□□ -1.09
CPS1YJL172W BFR2Q06631 534 aaKnown RBP8.16□□□□□ -1.1
CPS1YJL172W MON2P48563 1636 aaPredicted RBP8.16□□□□□ -1.1
CPS1YJL172W TCB3Q03640 1545 aaKnown RBP8.12□□□□□ -1.11
CPS1YJL172W RQC2Q12532 1038 aaKnown RBP8.03□□□□□ -1.12
CPS1YJL172W TY1B-DR4Q07793 1604 aa7.96□□□□□ -1.13
CPS1YJL172W FAP1P53971 965 aa7.93□□□□□ -1.14
CPS1YJL172W SWR1Q05471 1514 aa7.92□□□□□ -1.14
CPS1YJL172W DIP2Q12220 943 aaPredicted RBP7.88□□□□□ -1.15
CPS1YJL172W AVT3P36062 692 aa7.87□□□□□ -1.15
CPS1YJL172W TFA1P36100 482 aa7.86□□□□□ -1.15
CPS1YJL172W SPT6P23615 1451 aaKnown RBP7.82□□□□□ -1.16
CPS1YJL172W SPA2P23201 1466 aaKnown RBP7.81□□□□□ -1.16
CPS1YJL172W DNA2P38859 1522 aa7.8□□□□□ -1.16
CPS1YJL172W HSL1P34244 1518 aa7.79□□□□□ -1.16
CPS1YJL172W KOG1P38873 1557 aa7.77□□□□□ -1.17
CPS1YJL172W SSN2P38931 1420 aa7.74□□□□□ -1.17
CPS1YJL172W HIR3P47171 1648 aa7.66□□□□□ -1.18
CPS1YJL172W XRN1P22147 1528 aaKnown RBP7.6□□□□□ -1.19
CPS1YJL172W ECM5Q03214 1411 aa7.55□□□□□ -1.2
CPS1YJL172W BUD4P47136 1447 aa7.52□□□□□ -1.21
CPS1YJL172W PRY3P47033 881 aa7.52□□□□□ -1.21
CPS1YJL172W TAF7Q05021 590 aa7.52□□□□□ -1.21
CPS1YJL172W THO2P53552 1597 aaKnown RBP7.48□□□□□ -1.21
CPS1YJL172W REV3P14284 1504 aa7.45□□□□□ -1.22
CPS1YJL172W RSE1Q04693 1361 aaKnown RBP7.43□□□□□ -1.22
CPS1YJL172W TAF2P23255 1407 aa7.41□□□□□ -1.22
CPS1YJL172W MDS3P53094 1487 aa7.37□□□□□ -1.23
CPS1YJL172W SIN3P22579 1536 aa7.37□□□□□ -1.23
CPS1YJL172W SKI3P17883 1432 aaKnown RBP7.35□□□□□ -1.23
CPS1YJL172W PEP1P32319 1579 aa7.31□□□□□ -1.24
CPS1YJL172W SSK2P53599 1579 aa7.31□□□□□ -1.24
CPS1YJL172W ATG2P53855 1592 aa7.31□□□□□ -1.24
CPS1YJL172W ISW2Q08773 1120 aa7.26□□□□□ -1.25
CPS1YJL172W ESP1Q03018 1630 aa7.25□□□□□ -1.25
CPS1YJL172W MYO2P19524 1574 aaKnown RBP7.24□□□□□ -1.25
CPS1YJL172W RPG1P38249 964 aaKnown RBP7.24□□□□□ -1.25
CPS1YJL172W YPK9Q12697 1472 aa7.21□□□□□ -1.26
CPS1YJL172W PRI1P10363 409 aa7.17□□□□□ -1.26
CPS1YJL172W UFD4P33202 1483 aa7.17□□□□□ -1.26
CPS1YJL172W BPT1P14772 1559 aa7.17□□□□□ -1.26
CPS1YJL172W SCC2Q04002 1493 aa7.15□□□□□ -1.26
CPS1YJL172W URN1Q06525 465 aaKnown RBP7.13□□□□□ -1.27
CPS1YJL172W RPO31P04051 1460 aa7.12□□□□□ -1.27
CPS1YJL172W POL1P13382 1468 aa7.1□□□□□ -1.27
CPS1YJL172W TOP2P06786 1428 aaKnown RBP7.08□□□□□ -1.28
CPS1YJL172W RPL17AP05740 184 aaKnown RBP7.08□□□□□ -1.28
CPS1YJL172W RPL17BP46990 184 aaKnown RBP7.08□□□□□ -1.28
CPS1YJL172W STU1P38198 1513 aa7.06□□□□□ -1.28
CPS1YJL172W YCF1P39109 1515 aaKnown RBP7.05□□□□□ -1.28
CPS1YJL172W YTA7P40340 1379 aa7.04□□□□□ -1.28
CPS1YJL172W RKR1Q04781 1562 aa7.04□□□□□ -1.28
CPS1YJL172W HAA1Q12753 694 aaKnown RBP7.04□□□□□ -1.28
CPS1YJL172W CHD1P32657 1468 aa7.02□□□□□ -1.29
CPS1YJL172W SMC4Q12267 1418 aa7.01□□□□□ -1.29
CPS1YJL172W YOR1P53049 1477 aa7.01□□□□□ -1.29
CPS1YJL172W AAD16Q02895 342 aa6.98□□□□□ -1.29
CPS1YJL172W CDC25P04821 1589 aa6.96□□□□□ -1.29
CPS1YJL172W PAN1P32521 1480 aa6.96□□□□□ -1.29
CPS1YJL172W TY2B-LR1P0C2J3 1770 aa6.96□□□□□ -1.3
CPS1YJL172W TY2B-FP0CX63 1770 aa6.96□□□□□ -1.3
CPS1YJL172W TY2B-GR2P0CX64 1770 aa6.96□□□□□ -1.3
CPS1YJL172W TY2B-CP25384 1770 aa6.96□□□□□ -1.3
CPS1YJL172W TY2B-DR2Q03494 1770 aa6.96□□□□□ -1.3
CPS1YJL172W TY1B-DR1Q03855 1755 aa6.96□□□□□ -1.3
CPS1YJL172W TY2B-DR3Q07791 1770 aaKnown RBP6.96□□□□□ -1.3
CPS1YJL172W TY2B-OR1Q12113 1770 aa6.96□□□□□ -1.3
CPS1YJL172W TY2B-DR1Q12472 1770 aa6.96□□□□□ -1.3
CPS1YJL172W TY2B-OR2Q12501 1770 aa6.96□□□□□ -1.3
CPS1YJL172W MMS22Q06164 1454 aa6.95□□□□□ -1.3
CPS1YJL172W SPP41P38904 1435 aa6.93□□□□□ -1.3
CPS1YJL172W MYO4P32492 1471 aa6.93□□□□□ -1.3
CPS1YJL172W YCK3P39962 524 aa6.93□□□□□ -1.3
CPS1YJL172W REB1P21538 810 aa6.92□□□□□ -1.3
CPS1YJL172W SAS10Q12136 610 aaPredicted RBP6.92□□□□□ -1.3
CPS1YJL172W TRM732Q03496 1420 aa6.91□□□□□ -1.3
CPS1YJL172W TY1B-BRQ12193 1756 aa6.89□□□□□ -1.31
CPS1YJL172W TY1B-GR3Q12316 1755 aa6.89□□□□□ -1.31
CPS1YJL172W TY2B-BQ12491 1770 aa6.89□□□□□ -1.31
CPS1YJL172W TY1B-ORQ92393 1755 aa6.89□□□□□ -1.31
CPS1YJL172W TY1B-DR3Q99231 1755 aa6.89□□□□□ -1.31
CPS1YJL172W TSC11P40061 1430 aa6.89□□□□□ -1.31
CPS1YJL172W SPT21P35209 758 aa6.88□□□□□ -1.31
CPS1YJL172W STH1P32597 1359 aa6.88□□□□□ -1.31
CPS1YJL172W MET5P47169 1442 aa6.88□□□□□ -1.31
CPS1YJL172W DNF1P32660 1571 aa6.87□□□□□ -1.31
CPS1YJL172W TY1B-HO13535 1793 aa6.86□□□□□ -1.31
CPS1YJL172W TY1B-DR5P0C2I2 1755 aa6.86□□□□□ -1.31
CPS1YJL172W TY1B-DR6P0C2I3 1755 aa6.86□□□□□ -1.31
CPS1YJL172W TY1B-LR2P0C2I5 1755 aa6.86□□□□□ -1.31
CPS1YJL172W TY1B-LR3P0C2I6 1755 aaKnown RBP6.86□□□□□ -1.31
CPS1YJL172W TY1B-PR1P0C2I9 1755 aaKnown RBP6.86□□□□□ -1.31
CPS1YJL172W TY1B-PR2P0C2J0 1756 aa6.86□□□□□ -1.31
CPS1YJL172W TY1B-PR3P0C2J1 1755 aaKnown RBP6.86□□□□□ -1.31
CPS1YJL172W TY1B-JR1P47098 1755 aa6.86□□□□□ -1.31
CPS1YJL172W TY1B-ML2Q03434 1755 aaKnown RBP6.86□□□□□ -1.31
CPS1YJL172W TY1B-ER1Q03612 1755 aa6.86□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms