RNA–Protein interactions for RNA: YJL104W

PAM16, Transcript of Subunit of the import motor (PAM complex), yeastyeast

Gene PAM16, Length 450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAM16YJL104W MTC1P47018 478 aaKnown RBP11.48□□□□□ -0.57
PAM16YJL104W FAP1P53971 965 aa11.48□□□□□ -0.57
PAM16YJL104W PRY3P47033 881 aa10.81□□□□□ -0.68
PAM16YJL104W AAD16Q02895 342 aa10.33□□□□□ -0.76
PAM16YJL104W PRI1P10363 409 aa10.25□□□□□ -0.77
PAM16YJL104W HAA1Q12753 694 aaKnown RBP10.13□□□□□ -0.79
PAM16YJL104W YCK3P39962 524 aa10.1□□□□□ -0.79
PAM16YJL104W DRS1P32892 752 aaKnown RBP9.94□□□□□ -0.82
PAM16YJL104W ISW2Q08773 1120 aa9.78□□□□□ -0.84
PAM16YJL104W RPG1P38249 964 aaKnown RBP9.66□□□□□ -0.86
PAM16YJL104W TSR3Q12094 313 aaKnown RBP9.61□□□□□ -0.87
PAM16YJL104W MRPL32P25348 183 aa9.29□□□□□ -0.92
PAM16YJL104W YGL015CP33199 130 aa9.2□□□□□ -0.94
PAM16YJL104W DIP2Q12220 943 aaPredicted RBP8.98□□□□□ -0.97
PAM16YJL104W RSE1Q04693 1361 aaKnown RBP8.93□□□□□ -0.98
PAM16YJL104W BUD31P25337 157 aaPredicted RBP8.85□□□□□ -0.99
PAM16YJL104W REB1P21538 810 aa8.75□□□□□ -1.01
PAM16YJL104W RPL17AP05740 184 aaKnown RBP8.67□□□□□ -1.02
PAM16YJL104W RPL17BP46990 184 aaKnown RBP8.67□□□□□ -1.02
PAM16YJL104W CDC27P38042 758 aa8.58□□□□□ -1.04
PAM16YJL104W UBP10P53874 792 aaPredicted RBP8.53□□□□□ -1.04
PAM16YJL104W MAP2P38174 421 aaKnown RBP8.44□□□□□ -1.06
PAM16YJL104W AVT3P36062 692 aa8.41□□□□□ -1.06
PAM16YJL104W SIS1P25294 352 aaKnown RBP8.35□□□□□ -1.07
PAM16YJL104W YKR023WP36119 530 aaKnown RBP8.32□□□□□ -1.08
PAM16YJL104W UBP9P39967 754 aa8.27□□□□□ -1.09
PAM16YJL104W TIF4632P39936 914 aaKnown RBP8.22□□□□□ -1.09
PAM16YJL104W SPT21P35209 758 aa8.21□□□□□ -1.1
PAM16YJL104W TGL3P40308 642 aa8.19□□□□□ -1.1
PAM16YJL104W TFC8Q12308 588 aa8.16□□□□□ -1.1
PAM16YJL104W HOP09932 586 aa8.15□□□□□ -1.1
PAM16YJL104W DCD1P06773 312 aa8.12□□□□□ -1.11
PAM16YJL104W SCY1P53009 804 aa8.11□□□□□ -1.11
PAM16YJL104W SLX5P32828 619 aaKnown RBP8.09□□□□□ -1.11
PAM16YJL104W BFR2Q06631 534 aaKnown RBP7.92□□□□□ -1.14
PAM16YJL104W BCH2P36122 765 aa7.86□□□□□ -1.15
PAM16YJL104W RIM101P33400 625 aa7.75□□□□□ -1.17
PAM16YJL104W YBL029C-AQ3E756 94 aa7.72□□□□□ -1.17
PAM16YJL104W MST1P07236 462 aa7.7□□□□□ -1.18
PAM16YJL104W YOR238WQ08634 303 aa7.64□□□□□ -1.19
PAM16YJL104W EPS1P40557 701 aa7.6□□□□□ -1.19
PAM16YJL104W VNX1P42839 908 aa7.6□□□□□ -1.19
PAM16YJL104W BDF1P35817 686 aa7.59□□□□□ -1.19
PAM16YJL104W SPP1Q03012 353 aa7.56□□□□□ -1.2
PAM16YJL104W NSR1P27476 414 aaKnown RBP RIP-Chip data7.53□□□□□ -1.2 RIP-Chip
PAM16YJL104W YJL171CP46992 396 aa7.52□□□□□ -1.21
PAM16YJL104W AIR2Q12476 344 aaKnown RBP7.48□□□□□ -1.21
PAM16YJL104W PTP3P40048 928 aa7.46□□□□□ -1.22
PAM16YJL104W WSC3Q12215 556 aa7.46□□□□□ -1.22
PAM16YJL104W YAP5P40574 245 aa7.45□□□□□ -1.22
PAM16YJL104W OXP1P28273 1286 aa7.43□□□□□ -1.22
PAM16YJL104W FKH1P40466 484 aa7.43□□□□□ -1.22
PAM16YJL104W YIL055CP40523 627 aaKnown RBP7.43□□□□□ -1.22
PAM16YJL104W TIF11P38912 153 aaKnown RBP7.41□□□□□ -1.22
PAM16YJL104W BBC1P47068 1157 aa7.4□□□□□ -1.22
PAM16YJL104W GTT3P39996 337 aa7.33□□□□□ -1.24
PAM16YJL104W BMT6Q12291 365 aa7.32□□□□□ -1.24
PAM16YJL104W LDB19Q12502 818 aa7.29□□□□□ -1.24
PAM16YJL104W AI2P03876 854 aa7.28□□□□□ -1.24
PAM16YJL104W RSM7P47150 247 aa7.28□□□□□ -1.24
PAM16YJL104W ULI1P43604 169 aa7.25□□□□□ -1.25
PAM16YJL104W IOC2Q12072 812 aa7.23□□□□□ -1.25
PAM16YJL104W YAH1Q12184 172 aaKnown RBP7.16□□□□□ -1.26
PAM16YJL104W EAP1P36041 632 aaKnown RBP7.13□□□□□ -1.27
PAM16YJL104W MSB4Q12317 492 aa7.12□□□□□ -1.27
PAM16YJL104W RTG1P32607 177 aa7.08□□□□□ -1.28
PAM16YJL104W PIB1Q06651 286 aa7.08□□□□□ -1.28
PAM16YJL104W NCR1Q12200 1170 aa7.07□□□□□ -1.28
PAM16YJL104W TRP5P00931 707 aaKnown RBP7□□□□□ -1.29
PAM16YJL104W SEC61P32915 480 aa7□□□□□ -1.29
PAM16YJL104W PSD2P53037 1138 aaKnown RBP6.99□□□□□ -1.29
PAM16YJL104W YNL035CP53962 389 aaKnown RBP6.99□□□□□ -1.29
PAM16YJL104W SET4P42948 560 aa6.98□□□□□ -1.29
PAM16YJL104W YLR271WQ06152 274 aa6.98□□□□□ -1.29
PAM16YJL104W YOL036WQ08206 761 aa6.98□□□□□ -1.29
PAM16YJL104W MRM1P25270 412 aa6.97□□□□□ -1.29
PAM16YJL104W TFG1P41895 735 aaPredicted RBP6.95□□□□□ -1.3
PAM16YJL104W BCK2P33306 851 aa6.94□□□□□ -1.3
PAM16YJL104W YMR1P47147 688 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
PAM16YJL104W CHL1P22516 861 aaPredicted RBP6.87□□□□□ -1.31
PAM16YJL104W TFA1P36100 482 aa6.87□□□□□ -1.31
PAM16YJL104W DBP1P24784 617 aaKnown RBP6.86□□□□□ -1.31
PAM16YJL104W SAP30P38429 201 aa6.86□□□□□ -1.31
PAM16YJL104W VMA1P17255 1071 aaKnown RBP6.84□□□□□ -1.31
PAM16YJL104W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
PAM16YJL104W SAM3Q08986 587 aa6.82□□□□□ -1.32
PAM16YJL104W JIP4Q03361 876 aa6.81□□□□□ -1.32
PAM16YJL104W ABP1P15891 592 aaKnown RBP6.8□□□□□ -1.32
PAM16YJL104W RTG3P38165 486 aa6.8□□□□□ -1.32
PAM16YJL104W PRE3P38624 215 aa6.8□□□□□ -1.32
PAM16YJL104W YFR006WP43590 535 aa6.8□□□□□ -1.32
PAM16YJL104W DAN4P47179 1161 aa6.8□□□□□ -1.32
PAM16YJL104W YDL129WQ07555 291 aa6.8□□□□□ -1.32
PAM16YJL104W VPS29P38759 282 aa6.79□□□□□ -1.32
PAM16YJL104W STS1P38637 319 aa6.76□□□□□ -1.33
PAM16YJL104W SSP1P38871 571 aa6.74□□□□□ -1.33
PAM16YJL104W XDJ1P39102 459 aa6.73□□□□□ -1.33
PAM16YJL104W HTA1P04911 132 aaKnown RBP6.72□□□□□ -1.33
PAM16YJL104W HTA2P04912 132 aa6.72□□□□□ -1.33
PAM16YJL104W GYP5Q12344 894 aa6.71□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms