RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C MTC1P47018 478 aaKnown RBP7.42□□□□□ -1.22
VPS53YJL029C MON2P48563 1636 aaPredicted RBP7.33□□□□□ -1.24
VPS53YJL029C INO80P53115 1489 aa7.21□□□□□ -1.25
VPS53YJL029C TCB3Q03640 1545 aaKnown RBP7.08□□□□□ -1.28
VPS53YJL029C FAP1P53971 965 aa7.05□□□□□ -1.28
VPS53YJL029C TY1B-DR4Q07793 1604 aa7.02□□□□□ -1.28
VPS53YJL029C SWR1Q05471 1514 aa6.99□□□□□ -1.29
VPS53YJL029C SGS1P35187 1447 aa6.96□□□□□ -1.3
VPS53YJL029C KOG1P38873 1557 aa6.89□□□□□ -1.31
VPS53YJL029C DNA2P38859 1522 aa6.89□□□□□ -1.31
VPS53YJL029C DRS1P32892 752 aaKnown RBP6.82□□□□□ -1.32
VPS53YJL029C HSL1P34244 1518 aa6.76□□□□□ -1.33
VPS53YJL029C SPT6P23615 1451 aaKnown RBP6.74□□□□□ -1.33
VPS53YJL029C SPA2P23201 1466 aaKnown RBP6.66□□□□□ -1.34
VPS53YJL029C HIR3P47171 1648 aa6.62□□□□□ -1.35
VPS53YJL029C THO2P53552 1597 aaKnown RBP6.6□□□□□ -1.35
VPS53YJL029C PRY3P47033 881 aa6.59□□□□□ -1.35
VPS53YJL029C BUD4P47136 1447 aa6.53□□□□□ -1.36
VPS53YJL029C RSE1Q04693 1361 aaKnown RBP6.52□□□□□ -1.37
VPS53YJL029C ECM5Q03214 1411 aa6.49□□□□□ -1.37
VPS53YJL029C XRN1P22147 1528 aaKnown RBP6.46□□□□□ -1.37
VPS53YJL029C SSN2P38931 1420 aa6.46□□□□□ -1.37
VPS53YJL029C MDS3P53094 1487 aa6.45□□□□□ -1.38
VPS53YJL029C PEP1P32319 1579 aa6.42□□□□□ -1.38
VPS53YJL029C SIN3P22579 1536 aa6.41□□□□□ -1.38
VPS53YJL029C REV3P14284 1504 aa6.4□□□□□ -1.38
VPS53YJL029C AAD16Q02895 342 aa6.4□□□□□ -1.39
VPS53YJL029C ATG2P53855 1592 aa6.39□□□□□ -1.39
VPS53YJL029C SSK2P53599 1579 aa6.35□□□□□ -1.39
VPS53YJL029C PRI1P10363 409 aa6.32□□□□□ -1.4
VPS53YJL029C ISW2Q08773 1120 aa6.31□□□□□ -1.4
VPS53YJL029C ESP1Q03018 1630 aa6.28□□□□□ -1.4
VPS53YJL029C BPT1P14772 1559 aa6.28□□□□□ -1.4
VPS53YJL029C MYO2P19524 1574 aaKnown RBP6.24□□□□□ -1.41
VPS53YJL029C SKI3P17883 1432 aaKnown RBP6.21□□□□□ -1.42
VPS53YJL029C YPK9Q12697 1472 aa6.21□□□□□ -1.42
VPS53YJL029C YCF1P39109 1515 aaKnown RBP6.18□□□□□ -1.42
VPS53YJL029C TAF2P23255 1407 aa6.18□□□□□ -1.42
VPS53YJL029C RPG1P38249 964 aaKnown RBP6.17□□□□□ -1.42
VPS53YJL029C HAA1Q12753 694 aaKnown RBP6.17□□□□□ -1.42
VPS53YJL029C SCC2Q04002 1493 aa6.16□□□□□ -1.42
VPS53YJL029C RPO31P04051 1460 aa6.15□□□□□ -1.42
VPS53YJL029C UFD4P33202 1483 aa6.13□□□□□ -1.43
VPS53YJL029C TY2B-LR1P0C2J3 1770 aa6.08□□□□□ -1.44
VPS53YJL029C TY2B-FP0CX63 1770 aa6.08□□□□□ -1.44
VPS53YJL029C TY2B-GR2P0CX64 1770 aa6.08□□□□□ -1.44
VPS53YJL029C TY2B-CP25384 1770 aa6.08□□□□□ -1.44
VPS53YJL029C TY2B-DR2Q03494 1770 aa6.08□□□□□ -1.44
VPS53YJL029C TY1B-DR1Q03855 1755 aa6.08□□□□□ -1.44
VPS53YJL029C TY2B-DR3Q07791 1770 aaKnown RBP6.08□□□□□ -1.44
VPS53YJL029C TY2B-OR1Q12113 1770 aa6.08□□□□□ -1.44
VPS53YJL029C TY2B-DR1Q12472 1770 aa6.08□□□□□ -1.44
VPS53YJL029C TY2B-OR2Q12501 1770 aa6.08□□□□□ -1.44
VPS53YJL029C CDC25P04821 1589 aa6.08□□□□□ -1.44
VPS53YJL029C TY1B-BRQ12193 1756 aa6.06□□□□□ -1.44
VPS53YJL029C TY1B-GR3Q12316 1755 aa6.06□□□□□ -1.44
VPS53YJL029C TY1B-ORQ92393 1755 aa6.06□□□□□ -1.44
VPS53YJL029C TOP2P06786 1428 aaKnown RBP6.05□□□□□ -1.44
VPS53YJL029C CHD1P32657 1468 aa6.05□□□□□ -1.44
VPS53YJL029C MET5P47169 1442 aa6.04□□□□□ -1.44
VPS53YJL029C POL1P13382 1468 aa6.03□□□□□ -1.44
VPS53YJL029C TSR3Q12094 313 aaKnown RBP6.03□□□□□ -1.44
VPS53YJL029C ESC1Q03661 1658 aaKnown RBP6.03□□□□□ -1.44
VPS53YJL029C TY1B-HO13535 1793 aa6.02□□□□□ -1.45
VPS53YJL029C TY1B-DR5P0C2I2 1755 aa6.02□□□□□ -1.45
VPS53YJL029C TY1B-DR6P0C2I3 1755 aa6.02□□□□□ -1.45
VPS53YJL029C TY1B-LR2P0C2I5 1755 aa6.02□□□□□ -1.45
VPS53YJL029C TY1B-LR3P0C2I6 1755 aaKnown RBP6.02□□□□□ -1.45
VPS53YJL029C TY1B-PR1P0C2I9 1755 aaKnown RBP6.02□□□□□ -1.45
VPS53YJL029C TY1B-PR2P0C2J0 1756 aa6.02□□□□□ -1.45
VPS53YJL029C TY1B-PR3P0C2J1 1755 aaKnown RBP6.02□□□□□ -1.45
VPS53YJL029C TY1B-JR1P47098 1755 aa6.02□□□□□ -1.45
VPS53YJL029C TY1B-ML2Q03434 1755 aaKnown RBP6.02□□□□□ -1.45
VPS53YJL029C TY1B-ER1Q03612 1755 aa6.02□□□□□ -1.45
VPS53YJL029C TY1B-ML1Q04711 1755 aaKnown RBP6.02□□□□□ -1.45
VPS53YJL029C TY1B-GR2Q12269 1755 aa6.02□□□□□ -1.45
VPS53YJL029C TY1B-OLQ12273 1755 aa6.02□□□□□ -1.45
VPS53YJL029C TY1B-PLQ12414 1755 aaKnown RBP6.02□□□□□ -1.45
VPS53YJL029C TY2B-BQ12491 1770 aa6.02□□□□□ -1.45
VPS53YJL029C PAN1P32521 1480 aa6.02□□□□□ -1.45
VPS53YJL029C RKR1Q04781 1562 aa6.01□□□□□ -1.45
VPS53YJL029C TY1B-DR3Q99231 1755 aa6.01□□□□□ -1.45
VPS53YJL029C DIP2Q12220 943 aaPredicted RBP6□□□□□ -1.45
VPS53YJL029C SMC4Q12267 1418 aa5.99□□□□□ -1.45
VPS53YJL029C RPA190P10964 1664 aaKnown RBP5.99□□□□□ -1.45
VPS53YJL029C DNF1P32660 1571 aa5.98□□□□□ -1.45
VPS53YJL029C YOR1P53049 1477 aa5.98□□□□□ -1.45
VPS53YJL029C MMS22Q06164 1454 aa5.96□□□□□ -1.45
VPS53YJL029C LTE1P07866 1435 aa5.95□□□□□ -1.46
VPS53YJL029C STU1P38198 1513 aa5.93□□□□□ -1.46
VPS53YJL029C TRM732Q03496 1420 aa5.9□□□□□ -1.46
VPS53YJL029C SPP41P38904 1435 aa5.9□□□□□ -1.46
VPS53YJL029C TFA1P36100 482 aa5.9□□□□□ -1.47
VPS53YJL029C MRPL32P25348 183 aa5.89□□□□□ -1.47
VPS53YJL029C YCK3P39962 524 aa5.89□□□□□ -1.47
VPS53YJL029C MYO4P32492 1471 aa5.89□□□□□ -1.47
VPS53YJL029C TY1B-JR2P47100 1755 aaKnown RBP5.89□□□□□ -1.47
VPS53YJL029C TY1B-ER2Q03619 1755 aa5.89□□□□□ -1.47
VPS53YJL029C TY1B-MR1Q04214 1755 aa5.89□□□□□ -1.47
VPS53YJL029C TY1B-MR2Q04670 1755 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms