RNA–Protein interactions for RNA: YIR012W

SQT1, Transcript of Protein involved in 60S ribosomal subunit assembly or modification, yeastyeast

Gene SQT1, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQT1YIR012W MTC1P47018 478 aaKnown RBP12.28□□□□□ -0.44
SQT1YIR012W DRS1P32892 752 aaKnown RBP11.96□□□□□ -0.49
SQT1YIR012W FAP1P53971 965 aa11.81□□□□□ -0.52
SQT1YIR012W SGS1P35187 1447 aa11.32□□□□□ -0.6
SQT1YIR012W PRY3P47033 881 aa11.13□□□□□ -0.63
SQT1YIR012W INO80P53115 1489 aa11.09□□□□□ -0.63
SQT1YIR012W SPA2P23201 1466 aaKnown RBP10.96□□□□□ -0.65
SQT1YIR012W SSN2P38931 1420 aa10.89□□□□□ -0.67
SQT1YIR012W TCB3Q03640 1545 aaKnown RBP10.89□□□□□ -0.67
SQT1YIR012W AAD16Q02895 342 aa10.83□□□□□ -0.68
SQT1YIR012W PRI1P10363 409 aa10.79□□□□□ -0.68
SQT1YIR012W TY1B-DR4Q07793 1604 aa10.73□□□□□ -0.69
SQT1YIR012W MON2P48563 1636 aaPredicted RBP10.58□□□□□ -0.72
SQT1YIR012W HSL1P34244 1518 aa10.58□□□□□ -0.72
SQT1YIR012W HAA1Q12753 694 aaKnown RBP10.54□□□□□ -0.72
SQT1YIR012W SPT6P23615 1451 aaKnown RBP10.53□□□□□ -0.72
SQT1YIR012W YCK3P39962 524 aa10.52□□□□□ -0.73
SQT1YIR012W SWR1Q05471 1514 aa10.44□□□□□ -0.74
SQT1YIR012W HIR3P47171 1648 aa10.38□□□□□ -0.75
SQT1YIR012W ISW2Q08773 1120 aa10.37□□□□□ -0.75
SQT1YIR012W DIP2Q12220 943 aaPredicted RBP10.33□□□□□ -0.76
SQT1YIR012W XRN1P22147 1528 aaKnown RBP10.33□□□□□ -0.76
SQT1YIR012W REV3P14284 1504 aa10.22□□□□□ -0.77
SQT1YIR012W RPG1P38249 964 aaKnown RBP10.21□□□□□ -0.77
SQT1YIR012W BFR2Q06631 534 aaKnown RBP10.21□□□□□ -0.77
SQT1YIR012W SIN3P22579 1536 aa10.17□□□□□ -0.78
SQT1YIR012W THO2P53552 1597 aaKnown RBP10.12□□□□□ -0.79
SQT1YIR012W SSK2P53599 1579 aa10.09□□□□□ -0.79
SQT1YIR012W AVT3P36062 692 aa10.09□□□□□ -0.79
SQT1YIR012W TSR3Q12094 313 aaKnown RBP10.06□□□□□ -0.8
SQT1YIR012W DNA2P38859 1522 aa10.06□□□□□ -0.8
SQT1YIR012W TAF2P23255 1407 aa10.04□□□□□ -0.8
SQT1YIR012W KOG1P38873 1557 aa10.04□□□□□ -0.8
SQT1YIR012W BUD4P47136 1447 aa9.98□□□□□ -0.81
SQT1YIR012W ESP1Q03018 1630 aa9.96□□□□□ -0.81
SQT1YIR012W MYO2P19524 1574 aaKnown RBP9.96□□□□□ -0.82
SQT1YIR012W ATG2P53855 1592 aa9.92□□□□□ -0.82
SQT1YIR012W ECM5Q03214 1411 aa9.9□□□□□ -0.83
SQT1YIR012W CHD1P32657 1468 aa9.88□□□□□ -0.83
SQT1YIR012W RSE1Q04693 1361 aaKnown RBP9.87□□□□□ -0.83
SQT1YIR012W POL1P13382 1468 aa9.85□□□□□ -0.83
SQT1YIR012W YPK9Q12697 1472 aa9.85□□□□□ -0.83
SQT1YIR012W SKI3P17883 1432 aaKnown RBP9.85□□□□□ -0.83
SQT1YIR012W MMS22Q06164 1454 aa9.83□□□□□ -0.84
SQT1YIR012W PEP1P32319 1579 aa9.81□□□□□ -0.84
SQT1YIR012W MDS3P53094 1487 aa9.8□□□□□ -0.84
SQT1YIR012W STU1P38198 1513 aa9.79□□□□□ -0.84
SQT1YIR012W MRPL32P25348 183 aa9.76□□□□□ -0.85
SQT1YIR012W SCC2Q04002 1493 aa9.74□□□□□ -0.85
SQT1YIR012W YTA7P40340 1379 aa9.73□□□□□ -0.85
SQT1YIR012W RPO31P04051 1460 aa9.71□□□□□ -0.86
SQT1YIR012W RKR1Q04781 1562 aa9.7□□□□□ -0.86
SQT1YIR012W BPT1P14772 1559 aa9.69□□□□□ -0.86
SQT1YIR012W YOR1P53049 1477 aa9.69□□□□□ -0.86
SQT1YIR012W MYO4P32492 1471 aa9.64□□□□□ -0.87
SQT1YIR012W TOP2P06786 1428 aaKnown RBP9.64□□□□□ -0.87
SQT1YIR012W YGL015CP33199 130 aa9.63□□□□□ -0.87
SQT1YIR012W YCF1P39109 1515 aaKnown RBP9.62□□□□□ -0.87
SQT1YIR012W UFD4P33202 1483 aa9.62□□□□□ -0.87
SQT1YIR012W SMC4Q12267 1418 aa9.62□□□□□ -0.87
SQT1YIR012W SAS10Q12136 610 aaPredicted RBP9.55□□□□□ -0.88
SQT1YIR012W TY2B-LR1P0C2J3 1770 aa9.54□□□□□ -0.88
SQT1YIR012W TY2B-FP0CX63 1770 aa9.54□□□□□ -0.88
SQT1YIR012W TY2B-GR2P0CX64 1770 aa9.54□□□□□ -0.88
SQT1YIR012W TY2B-CP25384 1770 aa9.54□□□□□ -0.88
SQT1YIR012W TY2B-DR2Q03494 1770 aa9.54□□□□□ -0.88
SQT1YIR012W TY1B-DR1Q03855 1755 aa9.54□□□□□ -0.88
SQT1YIR012W TY2B-DR3Q07791 1770 aaKnown RBP9.54□□□□□ -0.88
SQT1YIR012W TY2B-OR1Q12113 1770 aa9.54□□□□□ -0.88
SQT1YIR012W TY2B-DR1Q12472 1770 aa9.54□□□□□ -0.88
SQT1YIR012W TY2B-OR2Q12501 1770 aa9.54□□□□□ -0.88
SQT1YIR012W TY1B-DR3Q99231 1755 aa9.5□□□□□ -0.89
SQT1YIR012W SNQ2P32568 1501 aaKnown RBP9.5□□□□□ -0.89
SQT1YIR012W RPL17AP05740 184 aaKnown RBP9.47□□□□□ -0.89
SQT1YIR012W RPL17BP46990 184 aaKnown RBP9.47□□□□□ -0.89
SQT1YIR012W TRM732Q03496 1420 aa9.47□□□□□ -0.89
SQT1YIR012W TY2B-BQ12491 1770 aa9.45□□□□□ -0.9
SQT1YIR012W STH1P32597 1359 aa9.44□□□□□ -0.9
SQT1YIR012W TAF7Q05021 590 aa9.43□□□□□ -0.9
SQT1YIR012W SPP41P38904 1435 aa9.42□□□□□ -0.9
SQT1YIR012W TFA1P36100 482 aa9.42□□□□□ -0.9
SQT1YIR012W REB1P21538 810 aa9.4□□□□□ -0.9
SQT1YIR012W IKI3Q06706 1349 aaKnown RBP9.39□□□□□ -0.91
SQT1YIR012W TY1B-HO13535 1793 aa9.38□□□□□ -0.91
SQT1YIR012W TY1B-DR5P0C2I2 1755 aa9.38□□□□□ -0.91
SQT1YIR012W TY1B-DR6P0C2I3 1755 aa9.38□□□□□ -0.91
SQT1YIR012W TY1B-LR2P0C2I5 1755 aa9.38□□□□□ -0.91
SQT1YIR012W TY1B-LR3P0C2I6 1755 aaKnown RBP9.38□□□□□ -0.91
SQT1YIR012W TY1B-PR1P0C2I9 1755 aaKnown RBP9.38□□□□□ -0.91
SQT1YIR012W TY1B-PR2P0C2J0 1756 aa9.38□□□□□ -0.91
SQT1YIR012W TY1B-PR3P0C2J1 1755 aaKnown RBP9.38□□□□□ -0.91
SQT1YIR012W TY1B-JR1P47098 1755 aa9.38□□□□□ -0.91
SQT1YIR012W TY1B-ML2Q03434 1755 aaKnown RBP9.38□□□□□ -0.91
SQT1YIR012W TY1B-ER1Q03612 1755 aa9.38□□□□□ -0.91
SQT1YIR012W TY1B-ML1Q04711 1755 aaKnown RBP9.38□□□□□ -0.91
SQT1YIR012W TY1B-BRQ12193 1756 aa9.38□□□□□ -0.91
SQT1YIR012W TY1B-GR2Q12269 1755 aa9.38□□□□□ -0.91
SQT1YIR012W TY1B-OLQ12273 1755 aa9.38□□□□□ -0.91
SQT1YIR012W TY1B-GR3Q12316 1755 aa9.38□□□□□ -0.91
SQT1YIR012W TY1B-PLQ12414 1755 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms