RNA–Protein interactions for RNA: YIL171W

YIL171W, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIL171W, Length 330 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIL171WYIL171W MTC1P47018 478 aaKnown RBP10.87□□□□□ -0.67
YIL171WYIL171W DRS1P32892 752 aaKnown RBP10.12□□□□□ -0.79
YIL171WYIL171W FAP1P53971 965 aa9.91□□□□□ -0.82
YIL171WYIL171W PRY3P47033 881 aa9.32□□□□□ -0.92
YIL171WYIL171W PRI1P10363 409 aa9.22□□□□□ -0.93
YIL171WYIL171W AAD16Q02895 342 aa9.16□□□□□ -0.94
YIL171WYIL171W ISW2Q08773 1120 aa9□□□□□ -0.97
YIL171WYIL171W RPG1P38249 964 aaKnown RBP8.97□□□□□ -0.97
YIL171WYIL171W DIP2Q12220 943 aaPredicted RBP8.9□□□□□ -0.98
YIL171WYIL171W YCK3P39962 524 aa8.84□□□□□ -0.99
YIL171WYIL171W TSR3Q12094 313 aaKnown RBP8.76□□□□□ -1.01
YIL171WYIL171W HAA1Q12753 694 aaKnown RBP8.67□□□□□ -1.02
YIL171WYIL171W RSE1Q04693 1361 aaKnown RBP8.59□□□□□ -1.03
YIL171WYIL171W AVT3P36062 692 aa8.55□□□□□ -1.04
YIL171WYIL171W BFR2Q06631 534 aaKnown RBP8.37□□□□□ -1.07
YIL171WYIL171W RPL17AP05740 184 aaKnown RBP8.36□□□□□ -1.07
YIL171WYIL171W MRPL32P25348 183 aa8.36□□□□□ -1.07
YIL171WYIL171W RPL17BP46990 184 aaKnown RBP8.36□□□□□ -1.07
YIL171WYIL171W REB1P21538 810 aa8.31□□□□□ -1.08
YIL171WYIL171W YGL015CP33199 130 aa8.01□□□□□ -1.13
YIL171WYIL171W CDC27P38042 758 aa7.98□□□□□ -1.13
YIL171WYIL171W SPT21P35209 758 aa7.97□□□□□ -1.13
YIL171WYIL171W YKR023WP36119 530 aaKnown RBP7.93□□□□□ -1.14
YIL171WYIL171W HOP09932 586 aa7.8□□□□□ -1.16
YIL171WYIL171W DCD1P06773 312 aa7.79□□□□□ -1.16
YIL171WYIL171W TFC8Q12308 588 aa7.75□□□□□ -1.17
YIL171WYIL171W MAP2P38174 421 aaKnown RBP7.73□□□□□ -1.17
YIL171WYIL171W RIM101P33400 625 aa7.68□□□□□ -1.18
YIL171WYIL171W UBP10P53874 792 aaPredicted RBP7.66□□□□□ -1.18
YIL171WYIL171W SCY1P53009 804 aa7.55□□□□□ -1.2
YIL171WYIL171W BCH2P36122 765 aa7.51□□□□□ -1.21
YIL171WYIL171W OXP1P28273 1286 aa7.46□□□□□ -1.22
YIL171WYIL171W SLX5P32828 619 aaKnown RBP7.42□□□□□ -1.22
YIL171WYIL171W BUD31P25337 157 aaPredicted RBP7.37□□□□□ -1.23
YIL171WYIL171W SGS1P35187 1447 aa7.36□□□□□ -1.23
YIL171WYIL171W TIF4632P39936 914 aaKnown RBP7.35□□□□□ -1.23
YIL171WYIL171W TGL3P40308 642 aa7.33□□□□□ -1.24
YIL171WYIL171W PTP3P40048 928 aa7.32□□□□□ -1.24
YIL171WYIL171W YIL055CP40523 627 aaKnown RBP7.31□□□□□ -1.24
YIL171WYIL171W EPS1P40557 701 aa7.3□□□□□ -1.24
YIL171WYIL171W INO80P53115 1489 aa7.29□□□□□ -1.24
YIL171WYIL171W BDF1P35817 686 aa7.28□□□□□ -1.24
YIL171WYIL171W TFA1P36100 482 aa7.27□□□□□ -1.25
YIL171WYIL171W YAH1Q12184 172 aaKnown RBP7.25□□□□□ -1.25
YIL171WYIL171W TCB3Q03640 1545 aaKnown RBP7.21□□□□□ -1.26
YIL171WYIL171W RSM7P47150 247 aa7.2□□□□□ -1.26
YIL171WYIL171W AI2P03876 854 aa7.15□□□□□ -1.26
YIL171WYIL171W BBC1P47068 1157 aa7.12□□□□□ -1.27
YIL171WYIL171W UBP9P39967 754 aa7.11□□□□□ -1.27
YIL171WYIL171W YLR271WQ06152 274 aa7.1□□□□□ -1.27
YIL171WYIL171W SPA2P23201 1466 aaKnown RBP7.09□□□□□ -1.27
YIL171WYIL171W MON2P48563 1636 aaPredicted RBP7.08□□□□□ -1.28
YIL171WYIL171W TY1B-DR4Q07793 1604 aa7.07□□□□□ -1.28
YIL171WYIL171W SSN2P38931 1420 aa7.03□□□□□ -1.28
YIL171WYIL171W SIS1P25294 352 aaKnown RBP7.03□□□□□ -1.28
YIL171WYIL171W MST1P07236 462 aa7.01□□□□□ -1.29
YIL171WYIL171W YOR238WQ08634 303 aa7.01□□□□□ -1.29
YIL171WYIL171W HSL1P34244 1518 aa6.98□□□□□ -1.29
YIL171WYIL171W SPT6P23615 1451 aaKnown RBP6.98□□□□□ -1.29
YIL171WYIL171W PSD2P53037 1138 aaKnown RBP6.97□□□□□ -1.29
YIL171WYIL171W YBL029C-AQ3E756 94 aa6.97□□□□□ -1.29
YIL171WYIL171W SSP1P38871 571 aa6.96□□□□□ -1.3
YIL171WYIL171W SWR1Q05471 1514 aa6.95□□□□□ -1.3
YIL171WYIL171W YAP5P40574 245 aa6.94□□□□□ -1.3
YIL171WYIL171W NSR1P27476 414 aaKnown RBP RIP-Chip data6.93□□□□□ -1.3not detected
YIL171WYIL171W MRM1P25270 412 aa6.91□□□□□ -1.3
YIL171WYIL171W WSC3Q12215 556 aa6.88□□□□□ -1.31
YIL171WYIL171W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31not detected
YIL171WYIL171W VNX1P42839 908 aa6.87□□□□□ -1.31
YIL171WYIL171W PIB1Q06651 286 aa6.87□□□□□ -1.31
YIL171WYIL171W CST9Q06032 482 aa6.86□□□□□ -1.31
YIL171WYIL171W HIR3P47171 1648 aa6.85□□□□□ -1.31
YIL171WYIL171W XRN1P22147 1528 aaKnown RBP6.81□□□□□ -1.32
YIL171WYIL171W SPP1Q03012 353 aa6.8□□□□□ -1.32
YIL171WYIL171W GTT3P39996 337 aa6.79□□□□□ -1.32
YIL171WYIL171W KOG1P38873 1557 aa6.78□□□□□ -1.32
YIL171WYIL171W MGA2P40578 1113 aa6.78□□□□□ -1.32
YIL171WYIL171W VPS29P38759 282 aa6.75□□□□□ -1.33
YIL171WYIL171W REV3P14284 1504 aa6.73□□□□□ -1.33
YIL171WYIL171W DNA2P38859 1522 aa6.73□□□□□ -1.33
YIL171WYIL171W YFR006WP43590 535 aa6.73□□□□□ -1.33
YIL171WYIL171W RCR1P38212 213 aa6.72□□□□□ -1.33
YIL171WYIL171W TIF11P38912 153 aaKnown RBP6.72□□□□□ -1.33
YIL171WYIL171W THO2P53552 1597 aaKnown RBP6.72□□□□□ -1.33
YIL171WYIL171W DBP1P24784 617 aaKnown RBP6.71□□□□□ -1.34
YIL171WYIL171W RTG3P38165 486 aa6.71□□□□□ -1.34
YIL171WYIL171W YMR1P47147 688 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
YIL171WYIL171W STS1P38637 319 aa6.68□□□□□ -1.34
YIL171WYIL171W ULI1P43604 169 aa6.67□□□□□ -1.34
YIL171WYIL171W SIN3P22579 1536 aa6.66□□□□□ -1.34
YIL171WYIL171W TAF2P23255 1407 aa6.65□□□□□ -1.35
YIL171WYIL171W BUD4P47136 1447 aa6.65□□□□□ -1.35
YIL171WYIL171W SET4P42948 560 aa6.64□□□□□ -1.35
YIL171WYIL171W IOC2Q12072 812 aa6.64□□□□□ -1.35
YIL171WYIL171W AIR2Q12476 344 aaKnown RBP6.64□□□□□ -1.35
YIL171WYIL171W LDB19Q12502 818 aa6.64□□□□□ -1.35
YIL171WYIL171W MYO2P19524 1574 aaKnown RBP6.63□□□□□ -1.35
YIL171WYIL171W SSK2P53599 1579 aa6.63□□□□□ -1.35
YIL171WYIL171W FKH1P40466 484 aa6.62□□□□□ -1.35
YIL171WYIL171W YOL036WQ08206 761 aa6.62□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 38.9 ms