RNA–Protein interactions for RNA: YHR192W

LNP1, Transcript of Lunapark family member involved in ER network formation, yeastyeast

Gene LNP1, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LNP1YHR192W MTC1P47018 478 aaKnown RBP16.57■□□□□ 0.24
LNP1YHR192W FAP1P53971 965 aa16.2■□□□□ 0.18
LNP1YHR192W PRY3P47033 881 aa15.31■□□□□ 0.04
LNP1YHR192W AAD16Q02895 342 aa14.67□□□□□ -0.06
LNP1YHR192W PRI1P10363 409 aa14.65□□□□□ -0.06
LNP1YHR192W YCK3P39962 524 aa14.61□□□□□ -0.07
LNP1YHR192W DRS1P32892 752 aaKnown RBP14.27□□□□□ -0.13
LNP1YHR192W HAA1Q12753 694 aaKnown RBP14.24□□□□□ -0.13
LNP1YHR192W ISW2Q08773 1120 aa13.91□□□□□ -0.18
LNP1YHR192W RPG1P38249 964 aaKnown RBP13.89□□□□□ -0.19
LNP1YHR192W TSR3Q12094 313 aaKnown RBP13.8□□□□□ -0.2
LNP1YHR192W MRPL32P25348 183 aa13.17□□□□□ -0.3
LNP1YHR192W YGL015CP33199 130 aa12.94□□□□□ -0.34
LNP1YHR192W DIP2Q12220 943 aaPredicted RBP12.94□□□□□ -0.34
LNP1YHR192W RSE1Q04693 1361 aaKnown RBP12.81□□□□□ -0.36
LNP1YHR192W RPL17AP05740 184 aaKnown RBP12.53□□□□□ -0.4
LNP1YHR192W RPL17BP46990 184 aaKnown RBP12.53□□□□□ -0.4
LNP1YHR192W REB1P21538 810 aa12.51□□□□□ -0.41
LNP1YHR192W BUD31P25337 157 aaPredicted RBP12.44□□□□□ -0.42
LNP1YHR192W CDC27P38042 758 aa12.44□□□□□ -0.42
LNP1YHR192W AVT3P36062 692 aa12.19□□□□□ -0.46
LNP1YHR192W MAP2P38174 421 aaKnown RBP12.15□□□□□ -0.46
LNP1YHR192W YKR023WP36119 530 aaKnown RBP12.11□□□□□ -0.47
LNP1YHR192W UBP10P53874 792 aaPredicted RBP12.11□□□□□ -0.47
LNP1YHR192W SPT21P35209 758 aa11.96□□□□□ -0.49
LNP1YHR192W DCD1P06773 312 aa11.87□□□□□ -0.51
LNP1YHR192W HOP09932 586 aa11.85□□□□□ -0.51
LNP1YHR192W TFC8Q12308 588 aa11.81□□□□□ -0.52
LNP1YHR192W SIS1P25294 352 aaKnown RBP11.69□□□□□ -0.54
LNP1YHR192W SCY1P53009 804 aa11.67□□□□□ -0.54
LNP1YHR192W TGL3P40308 642 aa11.58□□□□□ -0.56
LNP1YHR192W TIF4632P39936 914 aaKnown RBP11.56□□□□□ -0.56
LNP1YHR192W SLX5P32828 619 aaKnown RBP11.54□□□□□ -0.56
LNP1YHR192W UBP9P39967 754 aa11.52□□□□□ -0.57
LNP1YHR192W BFR2Q06631 534 aaKnown RBP11.51□□□□□ -0.57
LNP1YHR192W BCH2P36122 765 aa11.4□□□□□ -0.58
LNP1YHR192W RIM101P33400 625 aa11.24□□□□□ -0.61
LNP1YHR192W YBL029C-AQ3E756 94 aa11.04□□□□□ -0.64
LNP1YHR192W MST1P07236 462 aa11.01□□□□□ -0.65
LNP1YHR192W EPS1P40557 701 aa11.01□□□□□ -0.65
LNP1YHR192W BDF1P35817 686 aa11□□□□□ -0.65
LNP1YHR192W OXP1P28273 1286 aa10.89□□□□□ -0.67
LNP1YHR192W YOR238WQ08634 303 aa10.86□□□□□ -0.67
LNP1YHR192W VNX1P42839 908 aa10.85□□□□□ -0.67
LNP1YHR192W NSR1P27476 414 aaKnown RBP RIP-Chip data10.73□□□□□ -0.69not detected
LNP1YHR192W SPP1Q03012 353 aa10.7□□□□□ -0.7
LNP1YHR192W WSC3Q12215 556 aa10.67□□□□□ -0.7
LNP1YHR192W AIR2Q12476 344 aaKnown RBP10.67□□□□□ -0.7
LNP1YHR192W PTP3P40048 928 aa10.65□□□□□ -0.7
LNP1YHR192W YAP5P40574 245 aa10.61□□□□□ -0.71
LNP1YHR192W FKH1P40466 484 aa10.59□□□□□ -0.71
LNP1YHR192W YIL055CP40523 627 aaKnown RBP10.57□□□□□ -0.72
LNP1YHR192W TIF11P38912 153 aaKnown RBP10.53□□□□□ -0.72
LNP1YHR192W AI2P03876 854 aa10.5□□□□□ -0.73
LNP1YHR192W BBC1P47068 1157 aa10.5□□□□□ -0.73
LNP1YHR192W YJL171CP46992 396 aa10.49□□□□□ -0.73
LNP1YHR192W RSM7P47150 247 aa10.48□□□□□ -0.73
LNP1YHR192W LDB19Q12502 818 aa10.4□□□□□ -0.74
LNP1YHR192W GTT3P39996 337 aa10.39□□□□□ -0.75
LNP1YHR192W IOC2Q12072 812 aa10.37□□□□□ -0.75
LNP1YHR192W YAH1Q12184 172 aaKnown RBP10.34□□□□□ -0.75
LNP1YHR192W ULI1P43604 169 aa10.33□□□□□ -0.76
LNP1YHR192W PIB1Q06651 286 aa10.31□□□□□ -0.76
LNP1YHR192W BMT6Q12291 365 aa10.3□□□□□ -0.76
LNP1YHR192W YLR271WQ06152 274 aa10.14□□□□□ -0.79
LNP1YHR192W PSD2P53037 1138 aaKnown RBP10.12□□□□□ -0.79
LNP1YHR192W MSB4Q12317 492 aa10.11□□□□□ -0.79
LNP1YHR192W RTG1P32607 177 aa10.09□□□□□ -0.79
LNP1YHR192W MRM1P25270 412 aa10.07□□□□□ -0.8
LNP1YHR192W YOL036WQ08206 761 aa10.07□□□□□ -0.8
LNP1YHR192W TFA1P36100 482 aa10.06□□□□□ -0.8
LNP1YHR192W SET4P42948 560 aa10.06□□□□□ -0.8
LNP1YHR192W TRP5P00931 707 aaKnown RBP10.05□□□□□ -0.8
LNP1YHR192W EAP1P36041 632 aaKnown RBP10.05□□□□□ -0.8
LNP1YHR192W NCR1Q12200 1170 aa10.02□□□□□ -0.81
LNP1YHR192W YNL035CP53962 389 aaKnown RBP9.95□□□□□ -0.82
LNP1YHR192W SEC61P32915 480 aa9.93□□□□□ -0.82
LNP1YHR192W VPS29P38759 282 aa9.9□□□□□ -0.82
LNP1YHR192W DBP1P24784 617 aaKnown RBP9.89□□□□□ -0.83
LNP1YHR192W YFR006WP43590 535 aa9.89□□□□□ -0.83
LNP1YHR192W YMR1P47147 688 aaKnown RBP RIP-Chip data9.87□□□□□ -0.83not detected
LNP1YHR192W VMA1P17255 1071 aaKnown RBP9.86□□□□□ -0.83
LNP1YHR192W STS1P38637 319 aa9.84□□□□□ -0.83
LNP1YHR192W SAM3Q08986 587 aa9.84□□□□□ -0.83
LNP1YHR192W SAP30P38429 201 aa9.8□□□□□ -0.84
LNP1YHR192W DAN4P47179 1161 aa9.8□□□□□ -0.84
LNP1YHR192W BCK2P33306 851 aa9.77□□□□□ -0.85
LNP1YHR192W CST9Q06032 482 aa9.75□□□□□ -0.85
LNP1YHR192W TFG1P41895 735 aaPredicted RBP9.73□□□□□ -0.85
LNP1YHR192W RTG3P38165 486 aa9.72□□□□□ -0.85
LNP1YHR192W CHL1P22516 861 aaPredicted RBP9.69□□□□□ -0.86
LNP1YHR192W YDL129WQ07555 291 aa9.69□□□□□ -0.86
LNP1YHR192W JIP4Q03361 876 aa9.67□□□□□ -0.86
LNP1YHR192W RCR1P38212 213 aa9.66□□□□□ -0.86
LNP1YHR192W PRE3P38624 215 aa9.65□□□□□ -0.86
LNP1YHR192W SSP1P38871 571 aa9.65□□□□□ -0.86
LNP1YHR192W YDR344CQ05510 147 aa9.62□□□□□ -0.87
LNP1YHR192W GYP5Q12344 894 aa9.62□□□□□ -0.87
LNP1YHR192W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.62□□□□□ -0.87not detected
LNP1YHR192W DCW1P36091 449 aa9.58□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms