RNA–Protein interactions for RNA: YHR050W

SMF2, Transcript of Divalent metal ion transporter involved in manganese homeostasis, yeastyeast

Gene SMF2, Length 1,650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMF2YHR050W MTC1P47018 478 aaKnown RBP11.01□□□□□ -0.65
SMF2YHR050W DRS1P32892 752 aaKnown RBP10.66□□□□□ -0.7
SMF2YHR050W SGS1P35187 1447 aa9.92□□□□□ -0.82
SMF2YHR050W INO80P53115 1489 aa9.71□□□□□ -0.85
SMF2YHR050W TCB3Q03640 1545 aaKnown RBP9.55□□□□□ -0.88
SMF2YHR050W SPA2P23201 1466 aaKnown RBP9.54□□□□□ -0.88
SMF2YHR050W SSN2P38931 1420 aa9.49□□□□□ -0.89
SMF2YHR050W FAP1P53971 965 aa9.45□□□□□ -0.9
SMF2YHR050W TY1B-DR4Q07793 1604 aa9.42□□□□□ -0.9
SMF2YHR050W MON2P48563 1636 aaPredicted RBP9.31□□□□□ -0.92
SMF2YHR050W HSL1P34244 1518 aa9.25□□□□□ -0.93
SMF2YHR050W SPT6P23615 1451 aaKnown RBP9.22□□□□□ -0.93
SMF2YHR050W DIP2Q12220 943 aaPredicted RBP9.21□□□□□ -0.93
SMF2YHR050W SWR1Q05471 1514 aa9.17□□□□□ -0.94
SMF2YHR050W HIR3P47171 1648 aa9.1□□□□□ -0.95
SMF2YHR050W PRI1P10363 409 aa9.07□□□□□ -0.96
SMF2YHR050W XRN1P22147 1528 aaKnown RBP9.05□□□□□ -0.96
SMF2YHR050W AVT3P36062 692 aa9.01□□□□□ -0.97
SMF2YHR050W BFR2Q06631 534 aaKnown RBP9.01□□□□□ -0.97
SMF2YHR050W ISW2Q08773 1120 aa9□□□□□ -0.97
SMF2YHR050W AAD16Q02895 342 aa8.96□□□□□ -0.98
SMF2YHR050W RPG1P38249 964 aaKnown RBP8.93□□□□□ -0.98
SMF2YHR050W REV3P14284 1504 aa8.92□□□□□ -0.98
SMF2YHR050W THO2P53552 1597 aaKnown RBP8.88□□□□□ -0.99
SMF2YHR050W SIN3P22579 1536 aa8.87□□□□□ -0.99
SMF2YHR050W DNA2P38859 1522 aa8.87□□□□□ -0.99
SMF2YHR050W PRY3P47033 881 aa8.87□□□□□ -0.99
SMF2YHR050W KOG1P38873 1557 aa8.87□□□□□ -0.99
SMF2YHR050W SSK2P53599 1579 aa8.82□□□□□ -1
SMF2YHR050W TAF2P23255 1407 aa8.81□□□□□ -1
SMF2YHR050W RSE1Q04693 1361 aaKnown RBP8.77□□□□□ -1.01
SMF2YHR050W BUD4P47136 1447 aa8.76□□□□□ -1.01
SMF2YHR050W ESP1Q03018 1630 aa8.76□□□□□ -1.01
SMF2YHR050W MYO2P19524 1574 aaKnown RBP8.73□□□□□ -1.01
SMF2YHR050W ECM5Q03214 1411 aa8.72□□□□□ -1.01
SMF2YHR050W ATG2P53855 1592 aa8.69□□□□□ -1.02
SMF2YHR050W SKI3P17883 1432 aaKnown RBP8.66□□□□□ -1.02
SMF2YHR050W YPK9Q12697 1472 aa8.62□□□□□ -1.03
SMF2YHR050W TSR3Q12094 313 aaKnown RBP8.61□□□□□ -1.03
SMF2YHR050W POL1P13382 1468 aa8.6□□□□□ -1.03
SMF2YHR050W CHD1P32657 1468 aa8.6□□□□□ -1.03
SMF2YHR050W PEP1P32319 1579 aa8.6□□□□□ -1.03
SMF2YHR050W MDS3P53094 1487 aa8.59□□□□□ -1.03
SMF2YHR050W TFA1P36100 482 aa8.58□□□□□ -1.04
SMF2YHR050W STU1P38198 1513 aa8.56□□□□□ -1.04
SMF2YHR050W MMS22Q06164 1454 aa8.55□□□□□ -1.04
SMF2YHR050W YTA7P40340 1379 aa8.54□□□□□ -1.04
SMF2YHR050W SCC2Q04002 1493 aa8.52□□□□□ -1.05
SMF2YHR050W RKR1Q04781 1562 aa8.5□□□□□ -1.05
SMF2YHR050W YCK3P39962 524 aa8.49□□□□□ -1.05
SMF2YHR050W RPO31P04051 1460 aa8.49□□□□□ -1.05
SMF2YHR050W RPL17AP05740 184 aaKnown RBP8.49□□□□□ -1.05
SMF2YHR050W RPL17BP46990 184 aaKnown RBP8.49□□□□□ -1.05
SMF2YHR050W YOR1P53049 1477 aa8.47□□□□□ -1.05
SMF2YHR050W UFD4P33202 1483 aa8.45□□□□□ -1.06
SMF2YHR050W BPT1P14772 1559 aa8.45□□□□□ -1.06
SMF2YHR050W TOP2P06786 1428 aaKnown RBP8.45□□□□□ -1.06
SMF2YHR050W MYO4P32492 1471 aa8.42□□□□□ -1.06
SMF2YHR050W SMC4Q12267 1418 aa8.42□□□□□ -1.06
SMF2YHR050W YCF1P39109 1515 aaKnown RBP8.41□□□□□ -1.06
SMF2YHR050W SAS10Q12136 610 aaPredicted RBP8.41□□□□□ -1.06
SMF2YHR050W TY2B-LR1P0C2J3 1770 aa8.39□□□□□ -1.07
SMF2YHR050W TY2B-FP0CX63 1770 aa8.39□□□□□ -1.07
SMF2YHR050W TY2B-GR2P0CX64 1770 aa8.39□□□□□ -1.07
SMF2YHR050W TY2B-CP25384 1770 aa8.39□□□□□ -1.07
SMF2YHR050W TY2B-DR2Q03494 1770 aa8.39□□□□□ -1.07
SMF2YHR050W TY1B-DR1Q03855 1755 aa8.39□□□□□ -1.07
SMF2YHR050W TY2B-DR3Q07791 1770 aaKnown RBP8.39□□□□□ -1.07
SMF2YHR050W TY2B-OR1Q12113 1770 aa8.39□□□□□ -1.07
SMF2YHR050W TY2B-DR1Q12472 1770 aa8.39□□□□□ -1.07
SMF2YHR050W TY2B-OR2Q12501 1770 aa8.39□□□□□ -1.07
SMF2YHR050W REB1P21538 810 aa8.38□□□□□ -1.07
SMF2YHR050W TY1B-DR3Q99231 1755 aa8.36□□□□□ -1.07
SMF2YHR050W TAF7Q05021 590 aa8.34□□□□□ -1.08
SMF2YHR050W HAA1Q12753 694 aaKnown RBP8.33□□□□□ -1.08
SMF2YHR050W TY2B-BQ12491 1770 aa8.33□□□□□ -1.08
SMF2YHR050W SNQ2P32568 1501 aaKnown RBP8.3□□□□□ -1.08
SMF2YHR050W STH1P32597 1359 aa8.29□□□□□ -1.08
SMF2YHR050W TY1B-HO13535 1793 aa8.27□□□□□ -1.09
SMF2YHR050W TY1B-DR5P0C2I2 1755 aa8.27□□□□□ -1.09
SMF2YHR050W TY1B-DR6P0C2I3 1755 aa8.27□□□□□ -1.09
SMF2YHR050W TY1B-LR2P0C2I5 1755 aa8.27□□□□□ -1.09
SMF2YHR050W TY1B-LR3P0C2I6 1755 aaKnown RBP8.27□□□□□ -1.09
SMF2YHR050W TY1B-PR1P0C2I9 1755 aaKnown RBP8.27□□□□□ -1.09
SMF2YHR050W TY1B-PR2P0C2J0 1756 aa8.27□□□□□ -1.09
SMF2YHR050W TY1B-PR3P0C2J1 1755 aaKnown RBP8.27□□□□□ -1.09
SMF2YHR050W TY1B-JR1P47098 1755 aa8.27□□□□□ -1.09
SMF2YHR050W TY1B-ML2Q03434 1755 aaKnown RBP8.27□□□□□ -1.09
SMF2YHR050W TY1B-ER1Q03612 1755 aa8.27□□□□□ -1.09
SMF2YHR050W TY1B-ML1Q04711 1755 aaKnown RBP8.27□□□□□ -1.09
SMF2YHR050W TY1B-GR2Q12269 1755 aa8.27□□□□□ -1.09
SMF2YHR050W TY1B-OLQ12273 1755 aa8.27□□□□□ -1.09
SMF2YHR050W TY1B-PLQ12414 1755 aaKnown RBP8.27□□□□□ -1.09
SMF2YHR050W TY1B-BRQ12193 1756 aa8.26□□□□□ -1.09
SMF2YHR050W TY1B-GR3Q12316 1755 aa8.26□□□□□ -1.09
SMF2YHR050W TY1B-ORQ92393 1755 aa8.26□□□□□ -1.09
SMF2YHR050W SPP41P38904 1435 aa8.25□□□□□ -1.09
SMF2YHR050W RQC2Q12532 1038 aaKnown RBP8.25□□□□□ -1.09
SMF2YHR050W MLP2P40457 1679 aa8.25□□□□□ -1.09
SMF2YHR050W TRM732Q03496 1420 aa8.24□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms