RNA–Protein interactions for RNA: YGL220W

FRA2, Transcript of Protein involved in negative regulation of iron regulon transcription, yeastyeast

Gene FRA2, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FRA2YGL220W MTC1P47018 478 aaKnown RBP12.68□□□□□ -0.38
FRA2YGL220W FAP1P53971 965 aa11.97□□□□□ -0.49
FRA2YGL220W PRY3P47033 881 aa11.27□□□□□ -0.61
FRA2YGL220W DRS1P32892 752 aaKnown RBP11.2□□□□□ -0.62
FRA2YGL220W PRI1P10363 409 aa11.02□□□□□ -0.65
FRA2YGL220W AAD16Q02895 342 aa11.02□□□□□ -0.65
FRA2YGL220W YCK3P39962 524 aa10.68□□□□□ -0.7
FRA2YGL220W ISW2Q08773 1120 aa10.64□□□□□ -0.71
FRA2YGL220W HAA1Q12753 694 aaKnown RBP10.64□□□□□ -0.71
FRA2YGL220W RPG1P38249 964 aaKnown RBP10.5□□□□□ -0.73
FRA2YGL220W TSR3Q12094 313 aaKnown RBP10.31□□□□□ -0.76
FRA2YGL220W DIP2Q12220 943 aaPredicted RBP10.04□□□□□ -0.8
FRA2YGL220W MRPL32P25348 183 aa9.96□□□□□ -0.82
FRA2YGL220W RSE1Q04693 1361 aaKnown RBP9.9□□□□□ -0.82
FRA2YGL220W YGL015CP33199 130 aa9.75□□□□□ -0.85
FRA2YGL220W REB1P21538 810 aa9.6□□□□□ -0.87
FRA2YGL220W RPL17AP05740 184 aaKnown RBP9.59□□□□□ -0.87
FRA2YGL220W RPL17BP46990 184 aaKnown RBP9.59□□□□□ -0.87
FRA2YGL220W TFA1P36100 482 aa9.58□□□□□ -0.88
FRA2YGL220W BFR2Q06631 534 aaKnown RBP9.58□□□□□ -0.88
FRA2YGL220W AVT3P36062 692 aa9.57□□□□□ -0.88
FRA2YGL220W CDC27P38042 758 aa9.34□□□□□ -0.91
FRA2YGL220W UBP10P53874 792 aaPredicted RBP9.24□□□□□ -0.93
FRA2YGL220W BUD31P25337 157 aaPredicted RBP9.2□□□□□ -0.94
FRA2YGL220W YKR023WP36119 530 aaKnown RBP9.2□□□□□ -0.94
FRA2YGL220W SPT21P35209 758 aa9.19□□□□□ -0.94
FRA2YGL220W MAP2P38174 421 aaKnown RBP9.12□□□□□ -0.95
FRA2YGL220W RQC2Q12532 1038 aaKnown RBP9.08□□□□□ -0.96
FRA2YGL220W TFC8Q12308 588 aa9.02□□□□□ -0.97
FRA2YGL220W HOP09932 586 aa8.95□□□□□ -0.98
FRA2YGL220W DCD1P06773 312 aa8.9□□□□□ -0.98
FRA2YGL220W TIF4632P39936 914 aaKnown RBP8.84□□□□□ -0.99
FRA2YGL220W TGL3P40308 642 aa8.83□□□□□ -1
FRA2YGL220W SCY1P53009 804 aa8.82□□□□□ -1
FRA2YGL220W SLX5P32828 619 aaKnown RBP8.78□□□□□ -1
FRA2YGL220W RIM101P33400 625 aa8.75□□□□□ -1.01
FRA2YGL220W UBP9P39967 754 aa8.72□□□□□ -1.01
FRA2YGL220W BCH2P36122 765 aa8.68□□□□□ -1.02
FRA2YGL220W SIS1P25294 352 aaKnown RBP8.65□□□□□ -1.02
FRA2YGL220W MON2P48563 1636 aaPredicted RBP8.52□□□□□ -1.05
FRA2YGL220W INO80P53115 1489 aa8.48□□□□□ -1.05
FRA2YGL220W EPS1P40557 701 aa8.43□□□□□ -1.06
FRA2YGL220W MST1P07236 462 aa8.42□□□□□ -1.06
FRA2YGL220W BDF1P35817 686 aa8.41□□□□□ -1.06
FRA2YGL220W TAF7Q05021 590 aa8.41□□□□□ -1.06
FRA2YGL220W OXP1P28273 1286 aa8.4□□□□□ -1.06
FRA2YGL220W NSR1P27476 414 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07 RIP-Chip
FRA2YGL220W YOR238WQ08634 303 aa8.31□□□□□ -1.08
FRA2YGL220W YBL029C-AQ3E756 94 aa8.27□□□□□ -1.09
FRA2YGL220W PTP3P40048 928 aa8.26□□□□□ -1.09
FRA2YGL220W YIL055CP40523 627 aaKnown RBP8.26□□□□□ -1.09
FRA2YGL220W TCB3Q03640 1545 aaKnown RBP8.24□□□□□ -1.09
FRA2YGL220W DMA1P38823 416 aa8.22□□□□□ -1.09
FRA2YGL220W VNX1P42839 908 aa8.21□□□□□ -1.1
FRA2YGL220W BBC1P47068 1157 aa8.2□□□□□ -1.1
FRA2YGL220W TY1B-DR4Q07793 1604 aa8.19□□□□□ -1.1
FRA2YGL220W SGS1P35187 1447 aa8.19□□□□□ -1.1
FRA2YGL220W SWR1Q05471 1514 aa8.19□□□□□ -1.1
FRA2YGL220W YAP5P40574 245 aa8.18□□□□□ -1.1
FRA2YGL220W RSM7P47150 247 aa8.18□□□□□ -1.1
FRA2YGL220W AI2P03876 854 aa8.13□□□□□ -1.11
FRA2YGL220W SPP1Q03012 353 aa8.11□□□□□ -1.11
FRA2YGL220W DNA2P38859 1522 aa8.08□□□□□ -1.12
FRA2YGL220W KOG1P38873 1557 aa8.04□□□□□ -1.12
FRA2YGL220W TIF11P38912 153 aaKnown RBP8.03□□□□□ -1.12
FRA2YGL220W WSC3Q12215 556 aa8.03□□□□□ -1.12
FRA2YGL220W AIR2Q12476 344 aaKnown RBP8.03□□□□□ -1.12
FRA2YGL220W FKH1P40466 484 aa8.02□□□□□ -1.13
FRA2YGL220W YAH1Q12184 172 aaKnown RBP8□□□□□ -1.13
FRA2YGL220W LEO1P38439 464 aa7.99□□□□□ -1.13
FRA2YGL220W GTT3P39996 337 aa7.98□□□□□ -1.13
FRA2YGL220W HSL1P34244 1518 aa7.97□□□□□ -1.13
FRA2YGL220W SPT6P23615 1451 aaKnown RBP7.96□□□□□ -1.13
FRA2YGL220W YJL171CP46992 396 aa7.95□□□□□ -1.14
FRA2YGL220W SPA2P23201 1466 aaKnown RBP7.93□□□□□ -1.14
FRA2YGL220W YLR271WQ06152 274 aa7.91□□□□□ -1.14
FRA2YGL220W PSD2P53037 1138 aaKnown RBP7.9□□□□□ -1.14
FRA2YGL220W IOC2Q12072 812 aa7.89□□□□□ -1.15
FRA2YGL220W LDB19Q12502 818 aa7.88□□□□□ -1.15
FRA2YGL220W ULI1P43604 169 aa7.87□□□□□ -1.15
FRA2YGL220W MSB4Q12317 492 aa7.85□□□□□ -1.15
FRA2YGL220W BMT6Q12291 365 aa7.83□□□□□ -1.16
FRA2YGL220W EAP1P36041 632 aaKnown RBP7.81□□□□□ -1.16
FRA2YGL220W HIR3P47171 1648 aa7.79□□□□□ -1.16
FRA2YGL220W MRM1P25270 412 aa7.79□□□□□ -1.16
FRA2YGL220W PIB1Q06651 286 aa7.79□□□□□ -1.16
FRA2YGL220W YOL036WQ08206 761 aa7.72□□□□□ -1.17
FRA2YGL220W RTG1P32607 177 aa7.7□□□□□ -1.18
FRA2YGL220W YMR1P47147 688 aaKnown RBP RIP-Chip data7.7□□□□□ -1.18not detected
FRA2YGL220W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.7□□□□□ -1.18not detected
FRA2YGL220W TRP5P00931 707 aaKnown RBP7.69□□□□□ -1.18
FRA2YGL220W THO2P53552 1597 aaKnown RBP7.68□□□□□ -1.18
FRA2YGL220W SSP1P38871 571 aa7.68□□□□□ -1.18
FRA2YGL220W SET4P42948 560 aa7.68□□□□□ -1.18
FRA2YGL220W XRN1P22147 1528 aaKnown RBP7.68□□□□□ -1.18
FRA2YGL220W SEC61P32915 480 aa7.67□□□□□ -1.18
FRA2YGL220W VPS29P38759 282 aa7.67□□□□□ -1.18
FRA2YGL220W NCR1Q12200 1170 aa7.67□□□□□ -1.18
FRA2YGL220W BUD4P47136 1447 aa7.67□□□□□ -1.18
FRA2YGL220W YNL035CP53962 389 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms