RNA–Protein interactions for RNA: YGL097W

SRM1, Transcript of Nucleotide exchange factor for Gsp1p, yeastyeast

Gene SRM1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRM1YGL097W MTC1P47018 478 aaKnown RBP14.68□□□□□ -0.06
SRM1YGL097W DRS1P32892 752 aaKnown RBP14.05□□□□□ -0.16
SRM1YGL097W SGS1P35187 1447 aa13.48□□□□□ -0.25
SRM1YGL097W SPA2P23201 1466 aaKnown RBP13.33□□□□□ -0.27
SRM1YGL097W SSN2P38931 1420 aa13.18□□□□□ -0.3
SRM1YGL097W INO80P53115 1489 aa13.06□□□□□ -0.32
SRM1YGL097W FAP1P53971 965 aa12.76□□□□□ -0.37
SRM1YGL097W TCB3Q03640 1545 aaKnown RBP12.7□□□□□ -0.38
SRM1YGL097W TY1B-DR4Q07793 1604 aa12.61□□□□□ -0.39
SRM1YGL097W BFR2Q06631 534 aaKnown RBP12.51□□□□□ -0.41
SRM1YGL097W HSL1P34244 1518 aa12.47□□□□□ -0.41
SRM1YGL097W SPT6P23615 1451 aaKnown RBP12.36□□□□□ -0.43
SRM1YGL097W SKI3P17883 1432 aaKnown RBP12.32□□□□□ -0.44
SRM1YGL097W MON2P48563 1636 aaPredicted RBP12.29□□□□□ -0.44
SRM1YGL097W TFA1P36100 482 aa12.28□□□□□ -0.44
SRM1YGL097W HIR3P47171 1648 aa12.26□□□□□ -0.45
SRM1YGL097W XRN1P22147 1528 aaKnown RBP12.22□□□□□ -0.45
SRM1YGL097W PRI1P10363 409 aa12.2□□□□□ -0.46
SRM1YGL097W DIP2Q12220 943 aaPredicted RBP12.18□□□□□ -0.46
SRM1YGL097W REV3P14284 1504 aa12.13□□□□□ -0.47
SRM1YGL097W THO2P53552 1597 aaKnown RBP12.1□□□□□ -0.47
SRM1YGL097W SIN3P22579 1536 aa12.09□□□□□ -0.47
SRM1YGL097W CHD1P32657 1468 aa12.09□□□□□ -0.47
SRM1YGL097W MMS22Q06164 1454 aa12.08□□□□□ -0.48
SRM1YGL097W ISW2Q08773 1120 aa12.07□□□□□ -0.48
SRM1YGL097W AAD16Q02895 342 aa12.06□□□□□ -0.48
SRM1YGL097W SSK2P53599 1579 aa12.05□□□□□ -0.48
SRM1YGL097W SWR1Q05471 1514 aa12.04□□□□□ -0.48
SRM1YGL097W PRY3P47033 881 aa12.01□□□□□ -0.49
SRM1YGL097W RPG1P38249 964 aaKnown RBP11.94□□□□□ -0.5
SRM1YGL097W ESP1Q03018 1630 aa11.91□□□□□ -0.5
SRM1YGL097W TAF2P23255 1407 aa11.9□□□□□ -0.51
SRM1YGL097W MYO2P19524 1574 aaKnown RBP11.88□□□□□ -0.51
SRM1YGL097W AVT3P36062 692 aa11.86□□□□□ -0.51
SRM1YGL097W STU1P38198 1513 aa11.82□□□□□ -0.52
SRM1YGL097W POL1P13382 1468 aa11.79□□□□□ -0.52
SRM1YGL097W UFD4P33202 1483 aa11.76□□□□□ -0.53
SRM1YGL097W BPT1P14772 1559 aa11.74□□□□□ -0.53
SRM1YGL097W DNA2P38859 1522 aa11.71□□□□□ -0.53
SRM1YGL097W RSE1Q04693 1361 aaKnown RBP11.7□□□□□ -0.54
SRM1YGL097W KOG1P38873 1557 aa11.7□□□□□ -0.54
SRM1YGL097W ATG2P53855 1592 aa11.69□□□□□ -0.54
SRM1YGL097W TRM732Q03496 1420 aa11.67□□□□□ -0.54
SRM1YGL097W YPK9Q12697 1472 aa11.66□□□□□ -0.54
SRM1YGL097W YTA7P40340 1379 aa11.65□□□□□ -0.54
SRM1YGL097W SCC2Q04002 1493 aa11.62□□□□□ -0.55
SRM1YGL097W BUD4P47136 1447 aa11.62□□□□□ -0.55
SRM1YGL097W ECM5Q03214 1411 aa11.62□□□□□ -0.55
SRM1YGL097W RKR1Q04781 1562 aa11.6□□□□□ -0.55
SRM1YGL097W YOR1P53049 1477 aa11.58□□□□□ -0.56
SRM1YGL097W SAS10Q12136 610 aaPredicted RBP11.56□□□□□ -0.56
SRM1YGL097W MYO4P32492 1471 aa11.55□□□□□ -0.56
SRM1YGL097W TSR3Q12094 313 aaKnown RBP11.52□□□□□ -0.56
SRM1YGL097W IKI3Q06706 1349 aaKnown RBP11.51□□□□□ -0.57
SRM1YGL097W NUP170P38181 1502 aa11.51□□□□□ -0.57
SRM1YGL097W NSR1P27476 414 aaKnown RBP RIP-Chip data11.5□□□□□ -0.57not detected
SRM1YGL097W PEP1P32319 1579 aa11.47□□□□□ -0.57
SRM1YGL097W RPO31P04051 1460 aa11.45□□□□□ -0.58
SRM1YGL097W YCK3P39962 524 aa11.44□□□□□ -0.58
SRM1YGL097W SNQ2P32568 1501 aaKnown RBP11.44□□□□□ -0.58
SRM1YGL097W SPP41P38904 1435 aa11.43□□□□□ -0.58
SRM1YGL097W SMC4Q12267 1418 aa11.42□□□□□ -0.58
SRM1YGL097W NOP2P40991 618 aaKnown RBP11.41□□□□□ -0.58
SRM1YGL097W TY1B-DR3Q99231 1755 aa11.41□□□□□ -0.58
SRM1YGL097W SSM4P40318 1319 aa11.4□□□□□ -0.58
SRM1YGL097W TY2B-LR1P0C2J3 1770 aa11.4□□□□□ -0.59
SRM1YGL097W TY2B-FP0CX63 1770 aa11.4□□□□□ -0.59
SRM1YGL097W TY2B-GR2P0CX64 1770 aa11.4□□□□□ -0.59
SRM1YGL097W TY2B-CP25384 1770 aa11.4□□□□□ -0.59
SRM1YGL097W TY2B-DR2Q03494 1770 aa11.4□□□□□ -0.59
SRM1YGL097W TY1B-DR1Q03855 1755 aa11.4□□□□□ -0.59
SRM1YGL097W TY2B-DR3Q07791 1770 aaKnown RBP11.4□□□□□ -0.59
SRM1YGL097W TY2B-OR1Q12113 1770 aa11.4□□□□□ -0.59
SRM1YGL097W TY2B-DR1Q12472 1770 aa11.4□□□□□ -0.59
SRM1YGL097W TY2B-OR2Q12501 1770 aa11.4□□□□□ -0.59
SRM1YGL097W MLP2P40457 1679 aa11.39□□□□□ -0.59
SRM1YGL097W YCF1P39109 1515 aaKnown RBP11.39□□□□□ -0.59
SRM1YGL097W TOP2P06786 1428 aaKnown RBP11.39□□□□□ -0.59
SRM1YGL097W MDS3P53094 1487 aa11.37□□□□□ -0.59
SRM1YGL097W RQC2Q12532 1038 aaKnown RBP11.36□□□□□ -0.59
SRM1YGL097W PDR15Q04182 1529 aaKnown RBP11.33□□□□□ -0.6
SRM1YGL097W STH1P32597 1359 aa11.32□□□□□ -0.6
SRM1YGL097W HAA1Q12753 694 aaKnown RBP11.32□□□□□ -0.6
SRM1YGL097W TY2B-BQ12491 1770 aa11.31□□□□□ -0.6
SRM1YGL097W ULS1Q08562 1619 aa11.3□□□□□ -0.6
SRM1YGL097W RPL17AP05740 184 aaKnown RBP11.27□□□□□ -0.6
SRM1YGL097W RPL17BP46990 184 aaKnown RBP11.27□□□□□ -0.6
SRM1YGL097W GEA1P47102 1408 aaPredicted RBP11.26□□□□□ -0.61
SRM1YGL097W TAF7Q05021 590 aa11.26□□□□□ -0.61
SRM1YGL097W TY3B-GQ99315 1547 aa11.23□□□□□ -0.61
SRM1YGL097W TSC11P40061 1430 aa11.2□□□□□ -0.62
SRM1YGL097W PAN1P32521 1480 aa11.19□□□□□ -0.62
SRM1YGL097W TY1B-HO13535 1793 aa11.19□□□□□ -0.62
SRM1YGL097W TY1B-DR5P0C2I2 1755 aa11.19□□□□□ -0.62
SRM1YGL097W TY1B-DR6P0C2I3 1755 aa11.19□□□□□ -0.62
SRM1YGL097W TY1B-LR2P0C2I5 1755 aa11.19□□□□□ -0.62
SRM1YGL097W TY1B-LR3P0C2I6 1755 aaKnown RBP11.19□□□□□ -0.62
SRM1YGL097W TY1B-PR1P0C2I9 1755 aaKnown RBP11.19□□□□□ -0.62
SRM1YGL097W TY1B-PR2P0C2J0 1756 aa11.19□□□□□ -0.62
SRM1YGL097W TY1B-PR3P0C2J1 1755 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 5,963 RNA–protein pairs in 72.3 ms