RNA–Protein interactions for RNA: YER006W

NUG1, Transcript of GTPase that associates with nuclear 60S pre-ribosomes, yeastyeast

Gene NUG1, Length 1,563 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUG1YER006W MTC1P47018 478 aaKnown RBP11□□□□□ -0.65
NUG1YER006W FAP1P53971 965 aa10.87□□□□□ -0.67
NUG1YER006W PRY3P47033 881 aa10.29□□□□□ -0.76
NUG1YER006W DRS1P32892 752 aaKnown RBP10.2□□□□□ -0.78
NUG1YER006W YCK3P39962 524 aa9.71□□□□□ -0.85
NUG1YER006W AAD16Q02895 342 aa9.58□□□□□ -0.88
NUG1YER006W HAA1Q12753 694 aaKnown RBP9.56□□□□□ -0.88
NUG1YER006W PRI1P10363 409 aa9.44□□□□□ -0.9
NUG1YER006W ISW2Q08773 1120 aa9.16□□□□□ -0.94
NUG1YER006W RPG1P38249 964 aaKnown RBP9.04□□□□□ -0.96
NUG1YER006W DIP2Q12220 943 aaPredicted RBP8.98□□□□□ -0.97
NUG1YER006W TSR3Q12094 313 aaKnown RBP8.85□□□□□ -0.99
NUG1YER006W RSE1Q04693 1361 aaKnown RBP8.7□□□□□ -1.02
NUG1YER006W AVT3P36062 692 aa8.61□□□□□ -1.03
NUG1YER006W YGL015CP33199 130 aa8.58□□□□□ -1.04
NUG1YER006W BUD31P25337 157 aaPredicted RBP8.54□□□□□ -1.04
NUG1YER006W MRPL32P25348 183 aa8.5□□□□□ -1.05
NUG1YER006W BFR2Q06631 534 aaKnown RBP8.44□□□□□ -1.06
NUG1YER006W RPL17AP05740 184 aaKnown RBP8.43□□□□□ -1.06
NUG1YER006W RPL17BP46990 184 aaKnown RBP8.43□□□□□ -1.06
NUG1YER006W REB1P21538 810 aa8.41□□□□□ -1.06
NUG1YER006W SPT21P35209 758 aa8.03□□□□□ -1.12
NUG1YER006W CDC27P38042 758 aa8.01□□□□□ -1.13
NUG1YER006W SIS1P25294 352 aaKnown RBP7.98□□□□□ -1.13
NUG1YER006W YKR023WP36119 530 aaKnown RBP7.97□□□□□ -1.13
NUG1YER006W UBP10P53874 792 aaPredicted RBP7.81□□□□□ -1.16
NUG1YER006W TFC8Q12308 588 aa7.81□□□□□ -1.16
NUG1YER006W HOP09932 586 aa7.8□□□□□ -1.16
NUG1YER006W MAP2P38174 421 aaKnown RBP7.77□□□□□ -1.17
NUG1YER006W DCD1P06773 312 aa7.76□□□□□ -1.17
NUG1YER006W RIM101P33400 625 aa7.76□□□□□ -1.17
NUG1YER006W UBP9P39967 754 aa7.69□□□□□ -1.18
NUG1YER006W SCY1P53009 804 aa7.62□□□□□ -1.19
NUG1YER006W INO80P53115 1489 aa7.61□□□□□ -1.19
NUG1YER006W MON2P48563 1636 aaPredicted RBP7.58□□□□□ -1.2
NUG1YER006W BCH2P36122 765 aa7.56□□□□□ -1.2
NUG1YER006W SLX5P32828 619 aaKnown RBP7.54□□□□□ -1.2
NUG1YER006W TIF4632P39936 914 aaKnown RBP7.52□□□□□ -1.21
NUG1YER006W OXP1P28273 1286 aa7.48□□□□□ -1.21
NUG1YER006W TGL3P40308 642 aa7.47□□□□□ -1.21
NUG1YER006W YIL055CP40523 627 aaKnown RBP7.42□□□□□ -1.22
NUG1YER006W PTP3P40048 928 aa7.39□□□□□ -1.23
NUG1YER006W TFA1P36100 482 aa7.37□□□□□ -1.23
NUG1YER006W EPS1P40557 701 aa7.36□□□□□ -1.23
NUG1YER006W BDF1P35817 686 aa7.33□□□□□ -1.24
NUG1YER006W RSM7P47150 247 aa7.29□□□□□ -1.24
NUG1YER006W YAH1Q12184 172 aaKnown RBP7.26□□□□□ -1.25
NUG1YER006W BBC1P47068 1157 aa7.25□□□□□ -1.25
NUG1YER006W AI2P03876 854 aa7.21□□□□□ -1.25
NUG1YER006W DNA2P38859 1522 aa7.2□□□□□ -1.26
NUG1YER006W MST1P07236 462 aa7.13□□□□□ -1.27
NUG1YER006W YLR271WQ06152 274 aa7.13□□□□□ -1.27
NUG1YER006W YOR238WQ08634 303 aa7.13□□□□□ -1.27
NUG1YER006W NSR1P27476 414 aaKnown RBP RIP-Chip data7.11□□□□□ -1.27not detected
NUG1YER006W YBL029C-AQ3E756 94 aa7.09□□□□□ -1.27
NUG1YER006W KOG1P38873 1557 aa7.07□□□□□ -1.28
NUG1YER006W YAP5P40574 245 aa7.07□□□□□ -1.28
NUG1YER006W SSP1P38871 571 aa7.05□□□□□ -1.28
NUG1YER006W PSD2P53037 1138 aaKnown RBP7.03□□□□□ -1.28
NUG1YER006W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29not detected
NUG1YER006W SWR1Q05471 1514 aa6.96□□□□□ -1.29
NUG1YER006W VNX1P42839 908 aa6.96□□□□□ -1.29
NUG1YER006W MRM1P25270 412 aa6.95□□□□□ -1.3
NUG1YER006W YJL171CP46992 396 aa6.93□□□□□ -1.3
NUG1YER006W AIR2Q12476 344 aaKnown RBP6.93□□□□□ -1.3
NUG1YER006W GTT3P39996 337 aa6.92□□□□□ -1.3
NUG1YER006W WSC3Q12215 556 aa6.92□□□□□ -1.3
NUG1YER006W SPP1Q03012 353 aa6.91□□□□□ -1.3
NUG1YER006W MGA2P40578 1113 aa6.88□□□□□ -1.31
NUG1YER006W CST9Q06032 482 aa6.86□□□□□ -1.31
NUG1YER006W PIB1Q06651 286 aa6.86□□□□□ -1.31
NUG1YER006W SPA2P23201 1466 aaKnown RBP6.86□□□□□ -1.31
NUG1YER006W TIF11P38912 153 aaKnown RBP6.84□□□□□ -1.31
NUG1YER006W FKH1P40466 484 aa6.83□□□□□ -1.32
NUG1YER006W RTG3P38165 486 aa6.82□□□□□ -1.32
NUG1YER006W VPS29P38759 282 aa6.8□□□□□ -1.32
NUG1YER006W YMR1P47147 688 aaKnown RBP RIP-Chip data6.8□□□□□ -1.32not detected
NUG1YER006W DBP1P24784 617 aaKnown RBP6.78□□□□□ -1.32
NUG1YER006W ULI1P43604 169 aa6.77□□□□□ -1.33
NUG1YER006W RQC2Q12532 1038 aaKnown RBP6.76□□□□□ -1.33
NUG1YER006W YFR006WP43590 535 aa6.74□□□□□ -1.33
NUG1YER006W MSB4Q12317 492 aa6.74□□□□□ -1.33
NUG1YER006W IOC2Q12072 812 aa6.73□□□□□ -1.33
NUG1YER006W LDB19Q12502 818 aa6.73□□□□□ -1.33
NUG1YER006W EAP1P36041 632 aaKnown RBP6.72□□□□□ -1.33
NUG1YER006W STS1P38637 319 aa6.71□□□□□ -1.34
NUG1YER006W RCR1P38212 213 aa6.7□□□□□ -1.34
NUG1YER006W SET4P42948 560 aa6.7□□□□□ -1.34
NUG1YER006W YOL036WQ08206 761 aa6.7□□□□□ -1.34
NUG1YER006W BMT6Q12291 365 aa6.7□□□□□ -1.34
NUG1YER006W VMA1P17255 1071 aaKnown RBP6.69□□□□□ -1.34
NUG1YER006W TY1B-DR4Q07793 1604 aa6.67□□□□□ -1.34
NUG1YER006W SAM3Q08986 587 aa6.66□□□□□ -1.34
NUG1YER006W TCB3Q03640 1545 aaKnown RBP6.65□□□□□ -1.35
NUG1YER006W TRP5P00931 707 aaKnown RBP6.65□□□□□ -1.35
NUG1YER006W MIF2P35201 549 aa6.62□□□□□ -1.35
NUG1YER006W RTG1P32607 177 aa6.61□□□□□ -1.35
NUG1YER006W YNL035CP53962 389 aaKnown RBP6.59□□□□□ -1.35
NUG1YER006W NCR1Q12200 1170 aa6.58□□□□□ -1.36
NUG1YER006W GYP5Q12344 894 aa6.57□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 9 ms