RNA–Protein interactions for RNA: YDR479C

PEX29, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX29, Length 1,665 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX29YDR479C MTC1P47018 478 aaKnown RBP11.2□□□□□ -0.62
PEX29YDR479C FAP1P53971 965 aa10.98□□□□□ -0.65
PEX29YDR479C DRS1P32892 752 aaKnown RBP10.35□□□□□ -0.75
PEX29YDR479C PRY3P47033 881 aa10.34□□□□□ -0.75
PEX29YDR479C AAD16Q02895 342 aa9.93□□□□□ -0.82
PEX29YDR479C PRI1P10363 409 aa9.88□□□□□ -0.83
PEX29YDR479C YCK3P39962 524 aa9.71□□□□□ -0.85
PEX29YDR479C HAA1Q12753 694 aaKnown RBP9.65□□□□□ -0.86
PEX29YDR479C ISW2Q08773 1120 aa9.47□□□□□ -0.89
PEX29YDR479C RPG1P38249 964 aaKnown RBP9.39□□□□□ -0.91
PEX29YDR479C TSR3Q12094 313 aaKnown RBP9.31□□□□□ -0.92
PEX29YDR479C MRPL32P25348 183 aa8.95□□□□□ -0.98
PEX29YDR479C BFR2Q06631 534 aaKnown RBP8.91□□□□□ -0.98
PEX29YDR479C DIP2Q12220 943 aaPredicted RBP8.83□□□□□ -1
PEX29YDR479C YGL015CP33199 130 aa8.79□□□□□ -1
PEX29YDR479C AVT3P36062 692 aa8.72□□□□□ -1.01
PEX29YDR479C RSE1Q04693 1361 aaKnown RBP8.72□□□□□ -1.01
PEX29YDR479C REB1P21538 810 aa8.53□□□□□ -1.04
PEX29YDR479C RPL17AP05740 184 aaKnown RBP8.49□□□□□ -1.05
PEX29YDR479C RPL17BP46990 184 aaKnown RBP8.49□□□□□ -1.05
PEX29YDR479C BUD31P25337 157 aaPredicted RBP8.39□□□□□ -1.07
PEX29YDR479C CDC27P38042 758 aa8.35□□□□□ -1.07
PEX29YDR479C TFA1P36100 482 aa8.34□□□□□ -1.07
PEX29YDR479C UBP10P53874 792 aaPredicted RBP8.21□□□□□ -1.09
PEX29YDR479C MAP2P38174 421 aaKnown RBP8.19□□□□□ -1.1
PEX29YDR479C YKR023WP36119 530 aaKnown RBP8.14□□□□□ -1.11
PEX29YDR479C SPT21P35209 758 aa8.05□□□□□ -1.12
PEX29YDR479C HOP09932 586 aa7.98□□□□□ -1.13
PEX29YDR479C DCD1P06773 312 aa7.98□□□□□ -1.13
PEX29YDR479C TFC8Q12308 588 aa7.98□□□□□ -1.13
PEX29YDR479C SIS1P25294 352 aaKnown RBP7.93□□□□□ -1.14
PEX29YDR479C TIF4632P39936 914 aaKnown RBP7.89□□□□□ -1.15
PEX29YDR479C SCY1P53009 804 aa7.89□□□□□ -1.15
PEX29YDR479C UBP9P39967 754 aa7.87□□□□□ -1.15
PEX29YDR479C TGL3P40308 642 aa7.87□□□□□ -1.15
PEX29YDR479C SLX5P32828 619 aaKnown RBP7.83□□□□□ -1.16
PEX29YDR479C BCH2P36122 765 aa7.69□□□□□ -1.18
PEX29YDR479C RIM101P33400 625 aa7.63□□□□□ -1.19
PEX29YDR479C YBL029C-AQ3E756 94 aa7.46□□□□□ -1.22
PEX29YDR479C EPS1P40557 701 aa7.44□□□□□ -1.22
PEX29YDR479C MST1P07236 462 aa7.44□□□□□ -1.22
PEX29YDR479C OXP1P28273 1286 aa7.44□□□□□ -1.22
PEX29YDR479C BDF1P35817 686 aa7.44□□□□□ -1.22
PEX29YDR479C YOR238WQ08634 303 aa7.39□□□□□ -1.23
PEX29YDR479C PTP3P40048 928 aa7.35□□□□□ -1.23
PEX29YDR479C VNX1P42839 908 aa7.33□□□□□ -1.24
PEX29YDR479C YAH1Q12184 172 aaKnown RBP7.28□□□□□ -1.24
PEX29YDR479C NSR1P27476 414 aaKnown RBP RIP-Chip data7.28□□□□□ -1.24not detected
PEX29YDR479C SPP1Q03012 353 aa7.28□□□□□ -1.24
PEX29YDR479C YIL055CP40523 627 aaKnown RBP7.24□□□□□ -1.25
PEX29YDR479C SSP1P38871 571 aa7.23□□□□□ -1.25
PEX29YDR479C YAP5P40574 245 aa7.23□□□□□ -1.25
PEX29YDR479C WSC3Q12215 556 aa7.23□□□□□ -1.25
PEX29YDR479C YLR271WQ06152 274 aa7.21□□□□□ -1.26
PEX29YDR479C AIR2Q12476 344 aaKnown RBP7.19□□□□□ -1.26
PEX29YDR479C YJL171CP46992 396 aa7.19□□□□□ -1.26
PEX29YDR479C BBC1P47068 1157 aa7.19□□□□□ -1.26
PEX29YDR479C FKH1P40466 484 aa7.16□□□□□ -1.26
PEX29YDR479C TIF11P38912 153 aaKnown RBP7.15□□□□□ -1.27
PEX29YDR479C RSM7P47150 247 aa7.14□□□□□ -1.27
PEX29YDR479C AI2P03876 854 aa7.12□□□□□ -1.27
PEX29YDR479C GTT3P39996 337 aa7.11□□□□□ -1.27
PEX29YDR479C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.06□□□□□ -1.28not detected
PEX29YDR479C LDB19Q12502 818 aa7.05□□□□□ -1.28
PEX29YDR479C ULI1P43604 169 aa7.02□□□□□ -1.29
PEX29YDR479C PSD2P53037 1138 aaKnown RBP7.02□□□□□ -1.29
PEX29YDR479C BMT6Q12291 365 aa7.02□□□□□ -1.29
PEX29YDR479C CST9Q06032 482 aa7.01□□□□□ -1.29
PEX29YDR479C IOC2Q12072 812 aa7□□□□□ -1.29
PEX29YDR479C MGA2P40578 1113 aa6.98□□□□□ -1.29
PEX29YDR479C SPA2P23201 1466 aaKnown RBP6.97□□□□□ -1.29
PEX29YDR479C PIB1Q06651 286 aa6.96□□□□□ -1.29
PEX29YDR479C NOP2P40991 618 aaKnown RBP6.9□□□□□ -1.3
PEX29YDR479C MSB4Q12317 492 aa6.89□□□□□ -1.31
PEX29YDR479C EAP1P36041 632 aaKnown RBP6.88□□□□□ -1.31
PEX29YDR479C SGS1P35187 1447 aa6.88□□□□□ -1.31
PEX29YDR479C DMA1P38823 416 aa6.87□□□□□ -1.31
PEX29YDR479C RTG1P32607 177 aa6.86□□□□□ -1.31
PEX29YDR479C SSN2P38931 1420 aa6.86□□□□□ -1.31
PEX29YDR479C MRM1P25270 412 aa6.84□□□□□ -1.31
PEX29YDR479C NCR1Q12200 1170 aa6.83□□□□□ -1.32
PEX29YDR479C SET4P42948 560 aa6.82□□□□□ -1.32
PEX29YDR479C YOL036WQ08206 761 aa6.82□□□□□ -1.32
PEX29YDR479C TRP5P00931 707 aaKnown RBP6.81□□□□□ -1.32
PEX29YDR479C RQC2Q12532 1038 aaKnown RBP6.81□□□□□ -1.32
PEX29YDR479C RCR1P38212 213 aa6.81□□□□□ -1.32
PEX29YDR479C SKI3P17883 1432 aaKnown RBP6.78□□□□□ -1.32
PEX29YDR479C YNL035CP53962 389 aaKnown RBP6.77□□□□□ -1.33
PEX29YDR479C SEC61P32915 480 aa6.76□□□□□ -1.33
PEX29YDR479C RAM2P29703 316 aa6.73□□□□□ -1.33
PEX29YDR479C YMR1P47147 688 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
PEX29YDR479C INO80P53115 1489 aa6.71□□□□□ -1.34
PEX29YDR479C DBP1P24784 617 aaKnown RBP6.71□□□□□ -1.34
PEX29YDR479C RTG3P38165 486 aa6.69□□□□□ -1.34
PEX29YDR479C TFG1P41895 735 aaPredicted RBP6.69□□□□□ -1.34
PEX29YDR479C VMA1P17255 1071 aaKnown RBP6.68□□□□□ -1.34
PEX29YDR479C VPS29P38759 282 aa6.68□□□□□ -1.34
PEX29YDR479C YFR006WP43590 535 aa6.68□□□□□ -1.34
PEX29YDR479C BCK2P33306 851 aa6.66□□□□□ -1.34
PEX29YDR479C SAP30P38429 201 aa6.66□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 61.6 ms