RNA–Protein interactions for RNA: YDR414C

ERD1, Transcript of Predicted membrane protein required for lumenal ER protein retention, yeastyeast

Gene ERD1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ERD1YDR414C FAP1P53971 965 aa14.68□□□□□ -0.06
ERD1YDR414C MTC1P47018 478 aaKnown RBP14.6□□□□□ -0.07
ERD1YDR414C PRY3P47033 881 aa13.88□□□□□ -0.19
ERD1YDR414C AAD16Q02895 342 aa13.19□□□□□ -0.3
ERD1YDR414C YCK3P39962 524 aa13.16□□□□□ -0.3
ERD1YDR414C PRI1P10363 409 aa13.11□□□□□ -0.31
ERD1YDR414C HAA1Q12753 694 aaKnown RBP12.96□□□□□ -0.33
ERD1YDR414C ISW2Q08773 1120 aa12.38□□□□□ -0.43
ERD1YDR414C RPG1P38249 964 aaKnown RBP12.29□□□□□ -0.44
ERD1YDR414C TSR3Q12094 313 aaKnown RBP12.29□□□□□ -0.44
ERD1YDR414C DRS1P32892 752 aaKnown RBP12.16□□□□□ -0.46
ERD1YDR414C MRPL32P25348 183 aa11.79□□□□□ -0.52
ERD1YDR414C YGL015CP33199 130 aa11.72□□□□□ -0.53
ERD1YDR414C BUD31P25337 157 aaPredicted RBP11.41□□□□□ -0.58
ERD1YDR414C RSE1Q04693 1361 aaKnown RBP11.21□□□□□ -0.61
ERD1YDR414C DIP2Q12220 943 aaPredicted RBP11.19□□□□□ -0.62
ERD1YDR414C REB1P21538 810 aa11.01□□□□□ -0.65
ERD1YDR414C CDC27P38042 758 aa11□□□□□ -0.65
ERD1YDR414C RPL17AP05740 184 aaKnown RBP10.95□□□□□ -0.66
ERD1YDR414C RPL17BP46990 184 aaKnown RBP10.95□□□□□ -0.66
ERD1YDR414C UBP10P53874 792 aaPredicted RBP10.88□□□□□ -0.67
ERD1YDR414C MAP2P38174 421 aaKnown RBP10.81□□□□□ -0.68
ERD1YDR414C SIS1P25294 352 aaKnown RBP10.67□□□□□ -0.7
ERD1YDR414C YKR023WP36119 530 aaKnown RBP10.63□□□□□ -0.71
ERD1YDR414C UBP9P39967 754 aa10.48□□□□□ -0.73
ERD1YDR414C SPT21P35209 758 aa10.44□□□□□ -0.74
ERD1YDR414C AVT3P36062 692 aa10.42□□□□□ -0.74
ERD1YDR414C TGL3P40308 642 aa10.41□□□□□ -0.74
ERD1YDR414C TIF4632P39936 914 aaKnown RBP10.4□□□□□ -0.74
ERD1YDR414C TFC8Q12308 588 aa10.4□□□□□ -0.74
ERD1YDR414C DCD1P06773 312 aa10.38□□□□□ -0.75
ERD1YDR414C HOP09932 586 aa10.38□□□□□ -0.75
ERD1YDR414C SCY1P53009 804 aa10.32□□□□□ -0.76
ERD1YDR414C SLX5P32828 619 aaKnown RBP10.28□□□□□ -0.76
ERD1YDR414C BCH2P36122 765 aa10□□□□□ -0.81
ERD1YDR414C BFR2Q06631 534 aaKnown RBP9.96□□□□□ -0.82
ERD1YDR414C YBL029C-AQ3E756 94 aa9.87□□□□□ -0.83
ERD1YDR414C MST1P07236 462 aa9.84□□□□□ -0.83
ERD1YDR414C RIM101P33400 625 aa9.74□□□□□ -0.85
ERD1YDR414C TFA1P36100 482 aa9.72□□□□□ -0.85
ERD1YDR414C VNX1P42839 908 aa9.7□□□□□ -0.86
ERD1YDR414C YOR238WQ08634 303 aa9.67□□□□□ -0.86
ERD1YDR414C BDF1P35817 686 aa9.64□□□□□ -0.87
ERD1YDR414C EPS1P40557 701 aa9.64□□□□□ -0.87
ERD1YDR414C SPP1Q03012 353 aa9.59□□□□□ -0.87
ERD1YDR414C AIR2Q12476 344 aaKnown RBP9.59□□□□□ -0.87
ERD1YDR414C NSR1P27476 414 aaKnown RBP RIP-Chip data9.58□□□□□ -0.88not detected
ERD1YDR414C FKH1P40466 484 aa9.53□□□□□ -0.88
ERD1YDR414C YJL171CP46992 396 aa9.5□□□□□ -0.89
ERD1YDR414C WSC3Q12215 556 aa9.46□□□□□ -0.9
ERD1YDR414C YAP5P40574 245 aa9.42□□□□□ -0.9
ERD1YDR414C TIF11P38912 153 aaKnown RBP9.41□□□□□ -0.9
ERD1YDR414C OXP1P28273 1286 aa9.37□□□□□ -0.91
ERD1YDR414C BMT6Q12291 365 aa9.29□□□□□ -0.92
ERD1YDR414C LDB19Q12502 818 aa9.29□□□□□ -0.92
ERD1YDR414C IOC2Q12072 812 aa9.23□□□□□ -0.93
ERD1YDR414C GTT3P39996 337 aa9.22□□□□□ -0.93
ERD1YDR414C PTP3P40048 928 aa9.22□□□□□ -0.93
ERD1YDR414C ULI1P43604 169 aa9.19□□□□□ -0.94
ERD1YDR414C BBC1P47068 1157 aa9.19□□□□□ -0.94
ERD1YDR414C YIL055CP40523 627 aaKnown RBP9.15□□□□□ -0.94
ERD1YDR414C SGS1P35187 1447 aa9.12□□□□□ -0.95
ERD1YDR414C AI2P03876 854 aa9.1□□□□□ -0.95
ERD1YDR414C RSM7P47150 247 aa9.07□□□□□ -0.96
ERD1YDR414C INO80P53115 1489 aa9.01□□□□□ -0.97
ERD1YDR414C MSB4Q12317 492 aa9□□□□□ -0.97
ERD1YDR414C RTG1P32607 177 aa8.98□□□□□ -0.97
ERD1YDR414C PIB1Q06651 286 aa8.98□□□□□ -0.97
ERD1YDR414C EAP1P36041 632 aaKnown RBP8.97□□□□□ -0.97
ERD1YDR414C NCR1Q12200 1170 aa8.94□□□□□ -0.98
ERD1YDR414C TRP5P00931 707 aaKnown RBP8.89□□□□□ -0.99
ERD1YDR414C YOL036WQ08206 761 aa8.87□□□□□ -0.99
ERD1YDR414C RQC2Q12532 1038 aaKnown RBP8.87□□□□□ -0.99
ERD1YDR414C TCB3Q03640 1545 aaKnown RBP8.86□□□□□ -0.99
ERD1YDR414C SEC61P32915 480 aa8.86□□□□□ -0.99
ERD1YDR414C YNL035CP53962 389 aaKnown RBP8.85□□□□□ -0.99
ERD1YDR414C SET4P42948 560 aa8.84□□□□□ -0.99
ERD1YDR414C YAH1Q12184 172 aaKnown RBP8.83□□□□□ -1
ERD1YDR414C BCK2P33306 851 aa8.82□□□□□ -1
ERD1YDR414C SPA2P23201 1466 aaKnown RBP8.8□□□□□ -1
ERD1YDR414C TY1B-DR4Q07793 1604 aa8.74□□□□□ -1.01
ERD1YDR414C PSD2P53037 1138 aaKnown RBP8.74□□□□□ -1.01
ERD1YDR414C SSN2P38931 1420 aa8.72□□□□□ -1.01
ERD1YDR414C SAP30P38429 201 aa8.7□□□□□ -1.02
ERD1YDR414C CHL1P22516 861 aaPredicted RBP8.69□□□□□ -1.02
ERD1YDR414C MRM1P25270 412 aa8.69□□□□□ -1.02
ERD1YDR414C TFG1P41895 735 aaPredicted RBP8.69□□□□□ -1.02
ERD1YDR414C MON2P48563 1636 aaPredicted RBP8.68□□□□□ -1.02
ERD1YDR414C YLR271WQ06152 274 aa8.67□□□□□ -1.02
ERD1YDR414C DAN4P47179 1161 aa8.66□□□□□ -1.02
ERD1YDR414C RGA2Q06407 1009 aa8.66□□□□□ -1.02
ERD1YDR414C SAM3Q08986 587 aa8.64□□□□□ -1.03
ERD1YDR414C PRE3P38624 215 aa8.63□□□□□ -1.03
ERD1YDR414C VMA1P17255 1071 aaKnown RBP8.62□□□□□ -1.03
ERD1YDR414C YDL129WQ07555 291 aa8.62□□□□□ -1.03
ERD1YDR414C YMR1P47147 688 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
ERD1YDR414C DBP1P24784 617 aaKnown RBP8.6□□□□□ -1.03
ERD1YDR414C JIP4Q03361 876 aa8.58□□□□□ -1.04
ERD1YDR414C HSL1P34244 1518 aa8.56□□□□□ -1.04
ERD1YDR414C VPS29P38759 282 aa8.56□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms