RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeastyeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BFR2YDR299W FAP1P53971 965 aa8.62□□□□□ -1.03
BFR2YDR299W PRY3P47033 881 aa8.21□□□□□ -1.09
BFR2YDR299W YCK3P39962 524 aa7.63□□□□□ -1.19
BFR2YDR299W HAA1Q12753 694 aaKnown RBP7.58□□□□□ -1.2
BFR2YDR299W BUD31P25337 157 aaPredicted RBP7.19□□□□□ -1.26
BFR2YDR299W AAD16Q02895 342 aa7.01□□□□□ -1.29
BFR2YDR299W PRI1P10363 409 aa6.68□□□□□ -1.34
BFR2YDR299W SIS1P25294 352 aaKnown RBP6.59□□□□□ -1.35
BFR2YDR299W YGL015CP33199 130 aa6.5□□□□□ -1.37
BFR2YDR299W MTC1P47018 478 aaKnown RBP6.19□□□□□ -1.42
BFR2YDR299W TSR3Q12094 313 aaKnown RBP6.15□□□□□ -1.42
BFR2YDR299W MRPL32P25348 183 aa5.96□□□□□ -1.45
BFR2YDR299W UBP9P39967 754 aa5.93□□□□□ -1.46
BFR2YDR299W RGA2Q06407 1009 aa5.82□□□□□ -1.48
BFR2YDR299W RPG1P38249 964 aaKnown RBP5.66□□□□□ -1.5
BFR2YDR299W ISW2Q08773 1120 aa5.66□□□□□ -1.5
BFR2YDR299W DRS1P32892 752 aaKnown RBP5.43□□□□□ -1.54
BFR2YDR299W UBP10P53874 792 aaPredicted RBP5.37□□□□□ -1.55
BFR2YDR299W MAP2P38174 421 aaKnown RBP5.29□□□□□ -1.56
BFR2YDR299W TGL3P40308 642 aa5.22□□□□□ -1.57
BFR2YDR299W TIF4632P39936 914 aaKnown RBP5.19□□□□□ -1.58
BFR2YDR299W YJL171CP46992 396 aa5.18□□□□□ -1.58
BFR2YDR299W RGA1P39083 1007 aa5.13□□□□□ -1.59
BFR2YDR299W CDC27P38042 758 aa5.12□□□□□ -1.59
BFR2YDR299W AIR2Q12476 344 aaKnown RBP5.04□□□□□ -1.6
BFR2YDR299W YBL029C-AQ3E756 94 aa5.01□□□□□ -1.61
BFR2YDR299W FKH1P40466 484 aa4.88□□□□□ -1.63
BFR2YDR299W VNX1P42839 908 aa4.83□□□□□ -1.64
BFR2YDR299W BMT6Q12291 365 aa4.83□□□□□ -1.64
BFR2YDR299W SLX5P32828 619 aaKnown RBP4.82□□□□□ -1.64
BFR2YDR299W SPP1Q03012 353 aa4.79□□□□□ -1.64
BFR2YDR299W DIP2Q12220 943 aaPredicted RBP4.79□□□□□ -1.64
BFR2YDR299W SCY1P53009 804 aa4.69□□□□□ -1.66
BFR2YDR299W RSE1Q04693 1361 aaKnown RBP4.69□□□□□ -1.66
BFR2YDR299W MST1P07236 462 aa4.67□□□□□ -1.66
BFR2YDR299W REB1P21538 810 aa4.61□□□□□ -1.67
BFR2YDR299W RPL17AP05740 184 aaKnown RBP4.57□□□□□ -1.68
BFR2YDR299W RPL17BP46990 184 aaKnown RBP4.57□□□□□ -1.68
BFR2YDR299W AVT3P36062 692 aa4.54□□□□□ -1.68
BFR2YDR299W YKR023WP36119 530 aaKnown RBP4.54□□□□□ -1.68
BFR2YDR299W TIF11P38912 153 aaKnown RBP4.54□□□□□ -1.68
BFR2YDR299W BCK2P33306 851 aa4.53□□□□□ -1.68
BFR2YDR299W YOR238WQ08634 303 aa4.49□□□□□ -1.69
BFR2YDR299W WSC3Q12215 556 aa4.49□□□□□ -1.69
BFR2YDR299W DCD1P06773 312 aa4.48□□□□□ -1.69
BFR2YDR299W LDB19Q12502 818 aa4.48□□□□□ -1.69
BFR2YDR299W BFR2Q06631 534 aaKnown RBP4.46□□□□□ -1.7
BFR2YDR299W HOP09932 586 aa4.43□□□□□ -1.7
BFR2YDR299W TFC8Q12308 588 aa4.43□□□□□ -1.7
BFR2YDR299W SPT21P35209 758 aa4.41□□□□□ -1.7
BFR2YDR299W IOC2Q12072 812 aa4.32□□□□□ -1.72
BFR2YDR299W DPS1P04802 557 aaKnown RBP4.29□□□□□ -1.72
BFR2YDR299W ULI1P43604 169 aa4.29□□□□□ -1.72
BFR2YDR299W XDJ1P39102 459 aa4.23□□□□□ -1.73
BFR2YDR299W SRC1Q03707 834 aa4.22□□□□□ -1.73
BFR2YDR299W BCH2P36122 765 aa4.21□□□□□ -1.73
BFR2YDR299W NCR1Q12200 1170 aa4.19□□□□□ -1.74
BFR2YDR299W NSR1P27476 414 aaKnown RBP RIP-Chip data4.16□□□□□ -1.74not detected
BFR2YDR299W YPL062WQ02781 134 aa4.16□□□□□ -1.74
BFR2YDR299W CHL1P22516 861 aaPredicted RBP4.14□□□□□ -1.75
BFR2YDR299W RTG1P32607 177 aa4.13□□□□□ -1.75
BFR2YDR299W RIM101P33400 625 aa4.13□□□□□ -1.75
BFR2YDR299W YAP5P40574 245 aa4.09□□□□□ -1.76
BFR2YDR299W GTT3P39996 337 aa4.08□□□□□ -1.76
BFR2YDR299W BDF1P35817 686 aa4.04□□□□□ -1.76
BFR2YDR299W VRP1P37370 817 aa4.03□□□□□ -1.76
BFR2YDR299W EPS1P40557 701 aa4.03□□□□□ -1.76
BFR2YDR299W SEC61P32915 480 aa4□□□□□ -1.77
BFR2YDR299W PRE3P38624 215 aa4□□□□□ -1.77
BFR2YDR299W OXP1P28273 1286 aa3.98□□□□□ -1.77
BFR2YDR299W PTP3P40048 928 aa3.98□□□□□ -1.77
BFR2YDR299W YIL055CP40523 627 aaKnown RBP3.96□□□□□ -1.78
BFR2YDR299W EAP1P36041 632 aaKnown RBP3.95□□□□□ -1.78
BFR2YDR299W SAP30P38429 201 aa3.95□□□□□ -1.78
BFR2YDR299W TFG1P41895 735 aaPredicted RBP3.93□□□□□ -1.78
BFR2YDR299W YNL035CP53962 389 aaKnown RBP3.93□□□□□ -1.78
BFR2YDR299W MSB4Q12317 492 aa3.9□□□□□ -1.79
BFR2YDR299W YAH1Q12184 172 aaKnown RBP3.89□□□□□ -1.79
BFR2YDR299W BBC1P47068 1157 aa3.88□□□□□ -1.79
BFR2YDR299W TRP5P00931 707 aaKnown RBP3.88□□□□□ -1.79
BFR2YDR299W RSM7P47150 247 aa3.88□□□□□ -1.79
BFR2YDR299W AI2P03876 854 aa3.85□□□□□ -1.79
BFR2YDR299W TFA1P36100 482 aa3.83□□□□□ -1.8
BFR2YDR299W YDL129WQ07555 291 aa3.77□□□□□ -1.81
BFR2YDR299W YLR271WQ06152 274 aa3.77□□□□□ -1.81
BFR2YDR299W PIB1Q06651 286 aa3.74□□□□□ -1.81
BFR2YDR299W SET4P42948 560 aa3.73□□□□□ -1.81
BFR2YDR299W MRM1P25270 412 aa3.72□□□□□ -1.81
BFR2YDR299W PSD2P53037 1138 aaKnown RBP3.72□□□□□ -1.81
BFR2YDR299W YOL036WQ08206 761 aa3.72□□□□□ -1.81
BFR2YDR299W ARP8Q12386 881 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
BFR2YDR299W SSP1P38871 571 aa3.7□□□□□ -1.82
BFR2YDR299W DAN4P47179 1161 aa3.68□□□□□ -1.82
BFR2YDR299W TRK1P12685 1235 aa3.66□□□□□ -1.82
BFR2YDR299W CST9Q06032 482 aa3.64□□□□□ -1.83
BFR2YDR299W SAM3Q08986 587 aa3.64□□□□□ -1.83
BFR2YDR299W GBP2P25555 427 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83 RIP-Chip
BFR2YDR299W VPS29P38759 282 aa3.63□□□□□ -1.83
BFR2YDR299W YMR1P47147 688 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
BFR2YDR299W MTC5Q03897 1148 aa3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms