RNA–Protein interactions for RNA: YDR030C

RAD28, Transcript of Protein involved in DNA repair, yeastyeast

Gene RAD28, Length 1,521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAD28YDR030C MTC1P47018 478 aaKnown RBP11.8□□□□□ -0.52
RAD28YDR030C DRS1P32892 752 aaKnown RBP11.47□□□□□ -0.57
RAD28YDR030C FAP1P53971 965 aa10.96□□□□□ -0.65
RAD28YDR030C PRY3P47033 881 aa10.3□□□□□ -0.76
RAD28YDR030C AAD16Q02895 342 aa9.92□□□□□ -0.82
RAD28YDR030C DIP2Q12220 943 aaPredicted RBP9.9□□□□□ -0.82
RAD28YDR030C PRI1P10363 409 aa9.87□□□□□ -0.83
RAD28YDR030C BFR2Q06631 534 aaKnown RBP9.76□□□□□ -0.85
RAD28YDR030C ISW2Q08773 1120 aa9.68□□□□□ -0.86
RAD28YDR030C AVT3P36062 692 aa9.67□□□□□ -0.86
RAD28YDR030C YCK3P39962 524 aa9.6□□□□□ -0.87
RAD28YDR030C HAA1Q12753 694 aaKnown RBP9.6□□□□□ -0.87
RAD28YDR030C RPG1P38249 964 aaKnown RBP9.56□□□□□ -0.88
RAD28YDR030C RSE1Q04693 1361 aaKnown RBP9.44□□□□□ -0.9
RAD28YDR030C TSR3Q12094 313 aaKnown RBP9.34□□□□□ -0.91
RAD28YDR030C RPL17AP05740 184 aaKnown RBP9.1□□□□□ -0.95
RAD28YDR030C RPL17BP46990 184 aaKnown RBP9.1□□□□□ -0.95
RAD28YDR030C TFA1P36100 482 aa9.04□□□□□ -0.96
RAD28YDR030C REB1P21538 810 aa9.03□□□□□ -0.96
RAD28YDR030C MRPL32P25348 183 aa9□□□□□ -0.97
RAD28YDR030C YGL015CP33199 130 aa8.78□□□□□ -1
RAD28YDR030C SPT21P35209 758 aa8.75□□□□□ -1.01
RAD28YDR030C RIM101P33400 625 aa8.56□□□□□ -1.04
RAD28YDR030C YKR023WP36119 530 aaKnown RBP8.55□□□□□ -1.04
RAD28YDR030C CDC27P38042 758 aa8.45□□□□□ -1.06
RAD28YDR030C TFC8Q12308 588 aa8.38□□□□□ -1.07
RAD28YDR030C HOP09932 586 aa8.36□□□□□ -1.07
RAD28YDR030C DCD1P06773 312 aa8.3□□□□□ -1.08
RAD28YDR030C BUD31P25337 157 aaPredicted RBP8.29□□□□□ -1.08
RAD28YDR030C OXP1P28273 1286 aa8.27□□□□□ -1.09
RAD28YDR030C UBP10P53874 792 aaPredicted RBP8.23□□□□□ -1.09
RAD28YDR030C MAP2P38174 421 aaKnown RBP8.21□□□□□ -1.1
RAD28YDR030C YIL055CP40523 627 aaKnown RBP8.17□□□□□ -1.1
RAD28YDR030C BCH2P36122 765 aa8.13□□□□□ -1.11
RAD28YDR030C PTP3P40048 928 aa8.13□□□□□ -1.11
RAD28YDR030C YAH1Q12184 172 aaKnown RBP8.08□□□□□ -1.12
RAD28YDR030C SCY1P53009 804 aa8.06□□□□□ -1.12
RAD28YDR030C RSM7P47150 247 aa8.03□□□□□ -1.12
RAD28YDR030C SSP1P38871 571 aa8.01□□□□□ -1.13
RAD28YDR030C YLR271WQ06152 274 aa7.98□□□□□ -1.13
RAD28YDR030C SGS1P35187 1447 aa7.97□□□□□ -1.13
RAD28YDR030C EPS1P40557 701 aa7.95□□□□□ -1.14
RAD28YDR030C SLX5P32828 619 aaKnown RBP7.94□□□□□ -1.14
RAD28YDR030C TIF4632P39936 914 aaKnown RBP7.93□□□□□ -1.14
RAD28YDR030C AI2P03876 854 aa7.93□□□□□ -1.14
RAD28YDR030C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.93□□□□□ -1.14not detected
RAD28YDR030C BBC1P47068 1157 aa7.92□□□□□ -1.14
RAD28YDR030C BDF1P35817 686 aa7.91□□□□□ -1.14
RAD28YDR030C SIS1P25294 352 aaKnown RBP7.89□□□□□ -1.15
RAD28YDR030C TGL3P40308 642 aa7.88□□□□□ -1.15
RAD28YDR030C UBP9P39967 754 aa7.87□□□□□ -1.15
RAD28YDR030C RQC2Q12532 1038 aaKnown RBP7.85□□□□□ -1.15
RAD28YDR030C PSD2P53037 1138 aaKnown RBP7.82□□□□□ -1.16
RAD28YDR030C INO80P53115 1489 aa7.79□□□□□ -1.16
RAD28YDR030C MGA2P40578 1113 aa7.77□□□□□ -1.17
RAD28YDR030C CST9Q06032 482 aa7.72□□□□□ -1.17
RAD28YDR030C SPA2P23201 1466 aaKnown RBP7.69□□□□□ -1.18
RAD28YDR030C MRM1P25270 412 aa7.66□□□□□ -1.18
RAD28YDR030C SSN2P38931 1420 aa7.65□□□□□ -1.19
RAD28YDR030C TCB3Q03640 1545 aaKnown RBP7.64□□□□□ -1.19
RAD28YDR030C NSR1P27476 414 aaKnown RBP RIP-Chip data7.61□□□□□ -1.19not detected
RAD28YDR030C YAP5P40574 245 aa7.55□□□□□ -1.2
RAD28YDR030C MST1P07236 462 aa7.54□□□□□ -1.2
RAD28YDR030C RTG3P38165 486 aa7.54□□□□□ -1.2
RAD28YDR030C YOR238WQ08634 303 aa7.53□□□□□ -1.2
RAD28YDR030C DMA1P38823 416 aa7.52□□□□□ -1.21
RAD28YDR030C TY1B-DR4Q07793 1604 aa7.5□□□□□ -1.21
RAD28YDR030C RCR1P38212 213 aa7.48□□□□□ -1.21
RAD28YDR030C VPS29P38759 282 aa7.48□□□□□ -1.21
RAD28YDR030C YBL029C-AQ3E756 94 aa7.47□□□□□ -1.21
RAD28YDR030C YMR1P47147 688 aaKnown RBP RIP-Chip data7.46□□□□□ -1.22not detected
RAD28YDR030C HSL1P34244 1518 aa7.41□□□□□ -1.22
RAD28YDR030C DBP1P24784 617 aaKnown RBP7.41□□□□□ -1.22
RAD28YDR030C MON2P48563 1636 aaPredicted RBP7.4□□□□□ -1.22
RAD28YDR030C PIB1Q06651 286 aa7.4□□□□□ -1.22
RAD28YDR030C SPT6P23615 1451 aaKnown RBP7.39□□□□□ -1.23
RAD28YDR030C RAM2P29703 316 aa7.39□□□□□ -1.23
RAD28YDR030C STS1P38637 319 aa7.39□□□□□ -1.23
RAD28YDR030C YFR006WP43590 535 aa7.37□□□□□ -1.23
RAD28YDR030C GTT3P39996 337 aa7.35□□□□□ -1.23
RAD28YDR030C VNX1P42839 908 aa7.34□□□□□ -1.23
RAD28YDR030C MAK11P20484 414 aaKnown RBP7.33□□□□□ -1.24
RAD28YDR030C SPP1Q03012 353 aa7.32□□□□□ -1.24
RAD28YDR030C SWR1Q05471 1514 aa7.31□□□□□ -1.24
RAD28YDR030C VMA1P17255 1071 aaKnown RBP7.3□□□□□ -1.24
RAD28YDR030C WSC3Q12215 556 aa7.3□□□□□ -1.24
RAD28YDR030C HIR3P47171 1648 aa7.28□□□□□ -1.24
RAD28YDR030C XRN1P22147 1528 aaKnown RBP7.26□□□□□ -1.25
RAD28YDR030C SAM3Q08986 587 aa7.24□□□□□ -1.25
RAD28YDR030C MIF2P35201 549 aa7.22□□□□□ -1.25
RAD28YDR030C COQ8P27697 501 aa7.22□□□□□ -1.25
RAD28YDR030C MSB4Q12317 492 aa7.22□□□□□ -1.25
RAD28YDR030C YJL171CP46992 396 aa7.21□□□□□ -1.26
RAD28YDR030C YOL036WQ08206 761 aa7.21□□□□□ -1.26
RAD28YDR030C EDS1P38073 919 aa7.19□□□□□ -1.26
RAD28YDR030C TIF11P38912 153 aaKnown RBP7.19□□□□□ -1.26
RAD28YDR030C SET4P42948 560 aa7.18□□□□□ -1.26
RAD28YDR030C NOP53Q12080 455 aaKnown RBP7.17□□□□□ -1.26
RAD28YDR030C AIR2Q12476 344 aaKnown RBP7.17□□□□□ -1.26
RAD28YDR030C REV3P14284 1504 aa7.16□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms