RNA–Protein interactions for RNA: YDL228C

YDL228C, Transcript of Dubious open reading frame, yeastyeast

Gene YDL228C, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDL228CYDL228C MTC1P47018 478 aaKnown RBP9.88□□□□□ -0.83
YDL228CYDL228C DRS1P32892 752 aaKnown RBP9.7□□□□□ -0.86
YDL228CYDL228C MON2P48563 1636 aaPredicted RBP8.36□□□□□ -1.07
YDL228CYDL228C FAP1P53971 965 aa8.35□□□□□ -1.07
YDL228CYDL228C INO80P53115 1489 aa8.32□□□□□ -1.08
YDL228CYDL228C DIP2Q12220 943 aaPredicted RBP8.31□□□□□ -1.08
YDL228CYDL228C BFR2Q06631 534 aaKnown RBP8.27□□□□□ -1.09
YDL228CYDL228C AVT3P36062 692 aa8.18□□□□□ -1.1
YDL228CYDL228C PRI1P10363 409 aa8.06□□□□□ -1.12
YDL228CYDL228C SWR1Q05471 1514 aa8.02□□□□□ -1.13
YDL228CYDL228C SGS1P35187 1447 aa8.02□□□□□ -1.13
YDL228CYDL228C TCB3Q03640 1545 aaKnown RBP8.01□□□□□ -1.13
YDL228CYDL228C TY1B-DR4Q07793 1604 aa8□□□□□ -1.13
YDL228CYDL228C RPG1P38249 964 aaKnown RBP8□□□□□ -1.13
YDL228CYDL228C ISW2Q08773 1120 aa7.99□□□□□ -1.13
YDL228CYDL228C DNA2P38859 1522 aa7.98□□□□□ -1.13
YDL228CYDL228C AAD16Q02895 342 aa7.91□□□□□ -1.14
YDL228CYDL228C RSE1Q04693 1361 aaKnown RBP7.87□□□□□ -1.15
YDL228CYDL228C PRY3P47033 881 aa7.86□□□□□ -1.15
YDL228CYDL228C KOG1P38873 1557 aa7.82□□□□□ -1.16
YDL228CYDL228C HSL1P34244 1518 aa7.75□□□□□ -1.17
YDL228CYDL228C SPT6P23615 1451 aaKnown RBP7.73□□□□□ -1.17
YDL228CYDL228C TSR3Q12094 313 aaKnown RBP7.71□□□□□ -1.18
YDL228CYDL228C RPL17AP05740 184 aaKnown RBP7.66□□□□□ -1.18
YDL228CYDL228C RPL17BP46990 184 aaKnown RBP7.66□□□□□ -1.18
YDL228CYDL228C SPA2P23201 1466 aaKnown RBP7.62□□□□□ -1.19
YDL228CYDL228C YCK3P39962 524 aa7.61□□□□□ -1.19
YDL228CYDL228C HIR3P47171 1648 aa7.6□□□□□ -1.19
YDL228CYDL228C TFA1P36100 482 aa7.59□□□□□ -1.19
YDL228CYDL228C ECM5Q03214 1411 aa7.52□□□□□ -1.2
YDL228CYDL228C REB1P21538 810 aa7.51□□□□□ -1.21
YDL228CYDL228C XRN1P22147 1528 aaKnown RBP7.47□□□□□ -1.21
YDL228CYDL228C BUD4P47136 1447 aa7.46□□□□□ -1.21
YDL228CYDL228C THO2P53552 1597 aaKnown RBP7.46□□□□□ -1.22
YDL228CYDL228C SSN2P38931 1420 aa7.45□□□□□ -1.22
YDL228CYDL228C SPT21P35209 758 aa7.41□□□□□ -1.22
YDL228CYDL228C MDS3P53094 1487 aa7.38□□□□□ -1.23
YDL228CYDL228C PEP1P32319 1579 aa7.35□□□□□ -1.23
YDL228CYDL228C REV3P14284 1504 aa7.33□□□□□ -1.24
YDL228CYDL228C ATG2P53855 1592 aa7.32□□□□□ -1.24
YDL228CYDL228C HAA1Q12753 694 aaKnown RBP7.29□□□□□ -1.24
YDL228CYDL228C MRPL32P25348 183 aa7.27□□□□□ -1.25
YDL228CYDL228C TAF2P23255 1407 aa7.27□□□□□ -1.25
YDL228CYDL228C SIN3P22579 1536 aa7.24□□□□□ -1.25
YDL228CYDL228C YKR023WP36119 530 aaKnown RBP7.22□□□□□ -1.25
YDL228CYDL228C SKI3P17883 1432 aaKnown RBP7.2□□□□□ -1.26
YDL228CYDL228C RIM101P33400 625 aa7.2□□□□□ -1.26
YDL228CYDL228C SSK2P53599 1579 aa7.2□□□□□ -1.26
YDL228CYDL228C BPT1P14772 1559 aa7.16□□□□□ -1.26
YDL228CYDL228C CDC27P38042 758 aa7.16□□□□□ -1.26
YDL228CYDL228C ESP1Q03018 1630 aa7.15□□□□□ -1.27
YDL228CYDL228C DCD1P06773 312 aa7.11□□□□□ -1.27
YDL228CYDL228C HOP09932 586 aa7.09□□□□□ -1.27
YDL228CYDL228C UFD4P33202 1483 aa7.07□□□□□ -1.28
YDL228CYDL228C SCC2Q04002 1493 aa7.06□□□□□ -1.28
YDL228CYDL228C YPK9Q12697 1472 aa7.06□□□□□ -1.28
YDL228CYDL228C YCF1P39109 1515 aaKnown RBP7.05□□□□□ -1.28
YDL228CYDL228C OXP1P28273 1286 aa7.04□□□□□ -1.28
YDL228CYDL228C TFC8Q12308 588 aa7.03□□□□□ -1.28
YDL228CYDL228C MYO2P19524 1574 aaKnown RBP7.02□□□□□ -1.29
YDL228CYDL228C RPO31P04051 1460 aa7.01□□□□□ -1.29
YDL228CYDL228C TY2B-LR1P0C2J3 1770 aa6.97□□□□□ -1.29
YDL228CYDL228C TY2B-FP0CX63 1770 aa6.97□□□□□ -1.29
YDL228CYDL228C TY2B-GR2P0CX64 1770 aa6.97□□□□□ -1.29
YDL228CYDL228C TY2B-CP25384 1770 aa6.97□□□□□ -1.29
YDL228CYDL228C TY2B-DR2Q03494 1770 aa6.97□□□□□ -1.29
YDL228CYDL228C TY1B-DR1Q03855 1755 aa6.97□□□□□ -1.29
YDL228CYDL228C TY2B-DR3Q07791 1770 aaKnown RBP6.97□□□□□ -1.29
YDL228CYDL228C TY2B-OR1Q12113 1770 aa6.97□□□□□ -1.29
YDL228CYDL228C TY2B-DR1Q12472 1770 aa6.97□□□□□ -1.29
YDL228CYDL228C TY2B-OR2Q12501 1770 aa6.97□□□□□ -1.29
YDL228CYDL228C CHD1P32657 1468 aa6.93□□□□□ -1.3
YDL228CYDL228C CDC25P04821 1589 aa6.93□□□□□ -1.3
YDL228CYDL228C TY1B-BRQ12193 1756 aa6.92□□□□□ -1.3
YDL228CYDL228C TY1B-GR3Q12316 1755 aa6.92□□□□□ -1.3
YDL228CYDL228C TY1B-ORQ92393 1755 aa6.92□□□□□ -1.3
YDL228CYDL228C DNF1P32660 1571 aa6.92□□□□□ -1.3
YDL228CYDL228C TOP2P06786 1428 aaKnown RBP6.9□□□□□ -1.31
YDL228CYDL228C TY1B-DR3Q99231 1755 aa6.88□□□□□ -1.31
YDL228CYDL228C YAH1Q12184 172 aaKnown RBP6.88□□□□□ -1.31
YDL228CYDL228C TY2B-BQ12491 1770 aa6.87□□□□□ -1.31
YDL228CYDL228C RKR1Q04781 1562 aa6.87□□□□□ -1.31
YDL228CYDL228C POL1P13382 1468 aa6.87□□□□□ -1.31
YDL228CYDL228C RQC2Q12532 1038 aaKnown RBP6.87□□□□□ -1.31
YDL228CYDL228C TY1B-HO13535 1793 aa6.87□□□□□ -1.31
YDL228CYDL228C TY1B-DR5P0C2I2 1755 aa6.87□□□□□ -1.31
YDL228CYDL228C TY1B-DR6P0C2I3 1755 aa6.87□□□□□ -1.31
YDL228CYDL228C TY1B-LR2P0C2I5 1755 aa6.87□□□□□ -1.31
YDL228CYDL228C TY1B-LR3P0C2I6 1755 aaKnown RBP6.87□□□□□ -1.31
YDL228CYDL228C TY1B-PR1P0C2I9 1755 aaKnown RBP6.87□□□□□ -1.31
YDL228CYDL228C TY1B-PR2P0C2J0 1756 aa6.87□□□□□ -1.31
YDL228CYDL228C TY1B-PR3P0C2J1 1755 aaKnown RBP6.87□□□□□ -1.31
YDL228CYDL228C TY1B-JR1P47098 1755 aa6.87□□□□□ -1.31
YDL228CYDL228C TY1B-ML2Q03434 1755 aaKnown RBP6.87□□□□□ -1.31
YDL228CYDL228C TY1B-ER1Q03612 1755 aa6.87□□□□□ -1.31
YDL228CYDL228C TY1B-ML1Q04711 1755 aaKnown RBP6.87□□□□□ -1.31
YDL228CYDL228C TY1B-GR2Q12269 1755 aa6.87□□□□□ -1.31
YDL228CYDL228C TY1B-OLQ12273 1755 aa6.87□□□□□ -1.31
YDL228CYDL228C TY1B-PLQ12414 1755 aaKnown RBP6.87□□□□□ -1.31
YDL228CYDL228C PAN1P32521 1480 aa6.86□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms