RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeastyeast

Gene PRE7, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE7YBL041W MTC1P47018 478 aaKnown RBP16.39■□□□□ 0.21
PRE7YBL041W DRS1P32892 752 aaKnown RBP15.2■□□□□ 0.02
PRE7YBL041W FAP1P53971 965 aa14.8□□□□□ -0.04
PRE7YBL041W PRY3P47033 881 aa13.94□□□□□ -0.18
PRE7YBL041W PRI1P10363 409 aa13.86□□□□□ -0.19
PRE7YBL041W AAD16Q02895 342 aa13.75□□□□□ -0.21
PRE7YBL041W ISW2Q08773 1120 aa13.54□□□□□ -0.24
PRE7YBL041W RPG1P38249 964 aaKnown RBP13.44□□□□□ -0.26
PRE7YBL041W DIP2Q12220 943 aaPredicted RBP13.35□□□□□ -0.27
PRE7YBL041W YCK3P39962 524 aa13.3□□□□□ -0.28
PRE7YBL041W TSR3Q12094 313 aaKnown RBP13.11□□□□□ -0.31
PRE7YBL041W HAA1Q12753 694 aaKnown RBP13.02□□□□□ -0.33
PRE7YBL041W RSE1Q04693 1361 aaKnown RBP12.91□□□□□ -0.34
PRE7YBL041W AVT3P36062 692 aa12.88□□□□□ -0.35
PRE7YBL041W BFR2Q06631 534 aaKnown RBP12.59□□□□□ -0.39
PRE7YBL041W RPL17AP05740 184 aaKnown RBP12.55□□□□□ -0.4
PRE7YBL041W RPL17BP46990 184 aaKnown RBP12.55□□□□□ -0.4
PRE7YBL041W MRPL32P25348 183 aa12.51□□□□□ -0.41
PRE7YBL041W REB1P21538 810 aa12.45□□□□□ -0.42
PRE7YBL041W SPT21P35209 758 aa12.06□□□□□ -0.48
PRE7YBL041W YGL015CP33199 130 aa12□□□□□ -0.49
PRE7YBL041W CDC27P38042 758 aa12□□□□□ -0.49
PRE7YBL041W YKR023WP36119 530 aaKnown RBP11.92□□□□□ -0.5
PRE7YBL041W HOP09932 586 aa11.67□□□□□ -0.54
PRE7YBL041W DCD1P06773 312 aa11.66□□□□□ -0.54
PRE7YBL041W TFC8Q12308 588 aa11.65□□□□□ -0.54
PRE7YBL041W MAP2P38174 421 aaKnown RBP11.6□□□□□ -0.55
PRE7YBL041W UBP10P53874 792 aaPredicted RBP11.58□□□□□ -0.56
PRE7YBL041W RIM101P33400 625 aa11.56□□□□□ -0.56
PRE7YBL041W SCY1P53009 804 aa11.34□□□□□ -0.59
PRE7YBL041W BCH2P36122 765 aa11.28□□□□□ -0.6
PRE7YBL041W OXP1P28273 1286 aa11.21□□□□□ -0.61
PRE7YBL041W SLX5P32828 619 aaKnown RBP11.16□□□□□ -0.62
PRE7YBL041W BUD31P25337 157 aaPredicted RBP11.1□□□□□ -0.63
PRE7YBL041W TIF4632P39936 914 aaKnown RBP11.05□□□□□ -0.64
PRE7YBL041W TGL3P40308 642 aa11.03□□□□□ -0.64
PRE7YBL041W TFA1P36100 482 aa10.99□□□□□ -0.65
PRE7YBL041W EPS1P40557 701 aa10.99□□□□□ -0.65
PRE7YBL041W PTP3P40048 928 aa10.97□□□□□ -0.65
PRE7YBL041W BDF1P35817 686 aa10.94□□□□□ -0.66
PRE7YBL041W YIL055CP40523 627 aaKnown RBP10.92□□□□□ -0.66
PRE7YBL041W YAH1Q12184 172 aaKnown RBP10.84□□□□□ -0.67
PRE7YBL041W RSM7P47150 247 aa10.81□□□□□ -0.68
PRE7YBL041W AI2P03876 854 aa10.74□□□□□ -0.69
PRE7YBL041W BBC1P47068 1157 aa10.7□□□□□ -0.7
PRE7YBL041W YLR271WQ06152 274 aa10.67□□□□□ -0.7
PRE7YBL041W UBP9P39967 754 aa10.66□□□□□ -0.7
PRE7YBL041W MST1P07236 462 aa10.59□□□□□ -0.71
PRE7YBL041W NSR1P27476 414 aaKnown RBP RIP-Chip data10.56□□□□□ -0.72 RIP-Chip
PRE7YBL041W PSD2P53037 1138 aaKnown RBP10.53□□□□□ -0.72
PRE7YBL041W SIS1P25294 352 aaKnown RBP10.52□□□□□ -0.73
PRE7YBL041W YOR238WQ08634 303 aa10.52□□□□□ -0.73
PRE7YBL041W YBL029C-AQ3E756 94 aa10.47□□□□□ -0.73
PRE7YBL041W SSP1P38871 571 aa10.46□□□□□ -0.73
PRE7YBL041W YAP5P40574 245 aa10.45□□□□□ -0.74
PRE7YBL041W MON2P48563 1636 aaPredicted RBP10.38□□□□□ -0.75
PRE7YBL041W MRM1P25270 412 aa10.37□□□□□ -0.75
PRE7YBL041W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.36□□□□□ -0.75not detected
PRE7YBL041W VNX1P42839 908 aa10.33□□□□□ -0.76
PRE7YBL041W INO80P53115 1489 aa10.32□□□□□ -0.76
PRE7YBL041W CST9Q06032 482 aa10.31□□□□□ -0.76
PRE7YBL041W WSC3Q12215 556 aa10.29□□□□□ -0.76
PRE7YBL041W PIB1Q06651 286 aa10.27□□□□□ -0.77
PRE7YBL041W MGA2P40578 1113 aa10.21□□□□□ -0.77
PRE7YBL041W SPP1Q03012 353 aa10.21□□□□□ -0.77
PRE7YBL041W GTT3P39996 337 aa10.2□□□□□ -0.78
PRE7YBL041W VPS29P38759 282 aa10.15□□□□□ -0.78
PRE7YBL041W TIF11P38912 153 aaKnown RBP10.12□□□□□ -0.79
PRE7YBL041W RCR1P38212 213 aa10.1□□□□□ -0.79
PRE7YBL041W YMR1P47147 688 aaKnown RBP RIP-Chip data10.09□□□□□ -0.79not detected
PRE7YBL041W RTG3P38165 486 aa10.08□□□□□ -0.8
PRE7YBL041W STS1P38637 319 aa10.07□□□□□ -0.8
PRE7YBL041W YFR006WP43590 535 aa10.07□□□□□ -0.8
PRE7YBL041W DBP1P24784 617 aaKnown RBP10.06□□□□□ -0.8
PRE7YBL041W FKH1P40466 484 aa10.04□□□□□ -0.8
PRE7YBL041W AIR2Q12476 344 aaKnown RBP10.02□□□□□ -0.81
PRE7YBL041W ULI1P43604 169 aa10□□□□□ -0.81
PRE7YBL041W YOL036WQ08206 761 aa9.99□□□□□ -0.81
PRE7YBL041W IOC2Q12072 812 aa9.99□□□□□ -0.81
PRE7YBL041W LDB19Q12502 818 aa9.99□□□□□ -0.81
PRE7YBL041W VMA1P17255 1071 aaKnown RBP9.97□□□□□ -0.81
PRE7YBL041W SET4P42948 560 aa9.96□□□□□ -0.82
PRE7YBL041W MSB4Q12317 492 aa9.96□□□□□ -0.82
PRE7YBL041W TCB3Q03640 1545 aaKnown RBP9.94□□□□□ -0.82
PRE7YBL041W SWR1Q05471 1514 aa9.91□□□□□ -0.82
PRE7YBL041W SAM3Q08986 587 aa9.9□□□□□ -0.82
PRE7YBL041W TY1B-DR4Q07793 1604 aa9.89□□□□□ -0.83
PRE7YBL041W TRP5P00931 707 aaKnown RBP9.87□□□□□ -0.83
PRE7YBL041W EAP1P36041 632 aaKnown RBP9.86□□□□□ -0.83
PRE7YBL041W DNA2P38859 1522 aa9.85□□□□□ -0.83
PRE7YBL041W SGS1P35187 1447 aa9.83□□□□□ -0.84
PRE7YBL041W YJL171CP46992 396 aa9.82□□□□□ -0.84
PRE7YBL041W RTG1P32607 177 aa9.8□□□□□ -0.84
PRE7YBL041W RAM2P29703 316 aa9.75□□□□□ -0.85
PRE7YBL041W BMT6Q12291 365 aa9.75□□□□□ -0.85
PRE7YBL041W KOG1P38873 1557 aa9.75□□□□□ -0.85
PRE7YBL041W YNL035CP53962 389 aaKnown RBP9.73□□□□□ -0.85
PRE7YBL041W GYP5Q12344 894 aa9.73□□□□□ -0.85
PRE7YBL041W NCR1Q12200 1170 aa9.69□□□□□ -0.86
PRE7YBL041W SEC61P32915 480 aa9.68□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms