RNA–Protein interactions for RNA: ENST00000475684.2

CCHCR1-212, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-212ENST00000475684 NISCHQ9Y2I1 1504 aa26.02■■□□□ 1.76
CCHCR1-212ENST00000475684 ABCC9O60706 1549 aa24.56■■□□□ 1.52
CCHCR1-212ENST00000475684 DNAJC5BQ9UF47 199 aa23.8■■□□□ 1.4
CCHCR1-212ENST00000475684 CCDC180Q9P1Z9 1646 aa23.66■■□□□ 1.38
CCHCR1-212ENST00000475684 RB1CC1Q8TDY2 1594 aa22.98■■□□□ 1.27
CCHCR1-212ENST00000475684 PABPN1Q86U42 306 aaKnown RBP eCLIP22.78■■□□□ 1.24
CCHCR1-212ENST00000475684 AEBP2Q6ZN18 517 aaPredicted RBP22.7■■□□□ 1.22
CCHCR1-212ENST00000475684 NACADO15069 1562 aa22.6■■□□□ 1.21
CCHCR1-212ENST00000475684 DCAF8L2P0C7V8 631 aa22.47■■□□□ 1.19
CCHCR1-212ENST00000475684 DNAJC5Q9H3Z4 198 aa22.46■■□□□ 1.19
CCHCR1-212ENST00000475684 UNC13AQ9UPW8 1703 aa22.4■■□□□ 1.18
CCHCR1-212ENST00000475684 BICRAQ9NZM4 1560 aa22.32■■□□□ 1.16
CCHCR1-212ENST00000475684 CECR2Q9BXF3 1484 aa22.21■■□□□ 1.15
CCHCR1-212ENST00000475684 CC2D2AQ9P2K1 1620 aa22.11■■□□□ 1.13
CCHCR1-212ENST00000475684 MYO15BQ96JP2 1530 aa21.98■■□□□ 1.11
CCHCR1-212ENST00000475684 CHIC1Q5VXU3 224 aa21.98■■□□□ 1.11
CCHCR1-212ENST00000475684 SHROOM4Q9ULL8 1493 aa21.9■■□□□ 1.1
CCHCR1-212ENST00000475684 EIF4G1Q04637 1599 aaKnown RBP21.85■■□□□ 1.09
CCHCR1-212ENST00000475684 SCRIBQ14160 1630 aa21.57■■□□□ 1.04
CCHCR1-212ENST00000475684 CUX2O14529 1486 aa21.47■■□□□ 1.03
CCHCR1-212ENST00000475684 DCAF1Q9Y4B6 1507 aa21.4■■□□□ 1.02
CCHCR1-212ENST00000475684 ZCCHC6Q5VYS8 1495 aaKnown RBP21.36■■□□□ 1.01
CCHCR1-212ENST00000475684 ERCC6Q03468 1493 aa21.27■■□□□ 1
CCHCR1-212ENST00000475684 TRIM41Q8WV44 630 aa21.19■□□□□ 0.98
CCHCR1-212ENST00000475684 NCAPD3P42695 1498 aa20.89■□□□□ 0.94
CCHCR1-212ENST00000475684 NESP48681 1621 aa20.85■□□□□ 0.93
CCHCR1-212ENST00000475684 THOC2Q8NI27 1593 aaKnown RBP20.76■□□□□ 0.91
CCHCR1-212ENST00000475684 ATAD2BQ9ULI0 1458 aa20.71■□□□□ 0.91
CCHCR1-212ENST00000475684 HMGXB3Q12766 1538 aa20.63■□□□□ 0.89
CCHCR1-212ENST00000475684 SMARCA2P51531 1590 aa20.62■□□□□ 0.89
CCHCR1-212ENST00000475684 LAMC3Q9Y6N6 1575 aa20.55■□□□□ 0.88
CCHCR1-212ENST00000475684 KIF21AQ7Z4S6 1674 aa20.51■□□□□ 0.87
CCHCR1-212ENST00000475684 PDS5BQ9NTI5 1447 aa20.49■□□□□ 0.87
CCHCR1-212ENST00000475684 BAZ1BQ9UIG0 1483 aaKnown RBP20.48■□□□□ 0.87
CCHCR1-212ENST00000475684 SMARCA4P51532 1647 aa20.46■□□□□ 0.87
CCHCR1-212ENST00000475684 OSCARQ8IYS5 282 aa20.43■□□□□ 0.86
CCHCR1-212ENST00000475684 BAZ1AQ9NRL2 1556 aaPredicted RBP20.42■□□□□ 0.86
CCHCR1-212ENST00000475684 MRC2Q9UBG0 1479 aa20.34■□□□□ 0.85
CCHCR1-212ENST00000475684 WDR62O43379 1518 aa20.3■□□□□ 0.84
CCHCR1-212ENST00000475684 PEG3Q9GZU2 1588 aa20.25■□□□□ 0.83
CCHCR1-212ENST00000475684 CADPSQ9ULU8 1353 aa20.23■□□□□ 0.83
CCHCR1-212ENST00000475684 RIMBP3CA6NJZ7 1639 aa20.19■□□□□ 0.82
CCHCR1-212ENST00000475684 RIMBP3BA6NNM3 1639 aa20.19■□□□□ 0.82
CCHCR1-212ENST00000475684 RIMBP3Q9UFD9 1639 aa20.19■□□□□ 0.82
CCHCR1-212ENST00000475684 TRHP20396 242 aaPredicted RBP20.1■□□□□ 0.81
CCHCR1-212ENST00000475684 CEP164Q9UPV0 1460 aa20.1■□□□□ 0.81
CCHCR1-212ENST00000475684 MROH2BQ7Z745 1585 aa20.05■□□□□ 0.8
CCHCR1-212ENST00000475684 ARHGEF11O15085 1522 aa20.04■□□□□ 0.8
CCHCR1-212ENST00000475684 CYB5RLQ6IPT4 315 aa20.02■□□□□ 0.8
CCHCR1-212ENST00000475684 FANCD2Q9BXW9 1451 aa20■□□□□ 0.79
CCHCR1-212ENST00000475684 URB2Q14146 1524 aaKnown RBP19.88■□□□□ 0.77
CCHCR1-212ENST00000475684 CFTRP13569 1480 aa19.81■□□□□ 0.76
CCHCR1-212ENST00000475684 ZNF608Q9ULD9 1512 aaPredicted RBP19.79■□□□□ 0.76
CCHCR1-212ENST00000475684 ARAP1Q96P48 1450 aa19.78■□□□□ 0.76
CCHCR1-212ENST00000475684 WIZO95785 1651 aa19.77■□□□□ 0.76
CCHCR1-212ENST00000475684 IFT140Q96RY7 1462 aa19.73■□□□□ 0.75
CCHCR1-212ENST00000475684 RSF1Q96T23 1441 aaPredicted RBP19.64■□□□□ 0.73
CCHCR1-212ENST00000475684 FBLN2P98095 1184 aa19.63■□□□□ 0.73
CCHCR1-212ENST00000475684 CHD1O14646 1710 aa19.61■□□□□ 0.73
CCHCR1-212ENST00000475684 EIF4G3O43432 1585 aaKnown RBP19.61■□□□□ 0.73
CCHCR1-212ENST00000475684 AQRO60306 1485 aaKnown RBP eCLIP19.53■□□□□ 0.722e-10■■■■■ 47.9
CCHCR1-212ENST00000475684 TOPBP1Q92547 1522 aa19.52■□□□□ 0.72
CCHCR1-212ENST00000475684 PRDM2Q13029 1718 aa19.48■□□□□ 0.71
CCHCR1-212ENST00000475684 TOP2AP11388 1531 aaKnown RBP19.44■□□□□ 0.7
CCHCR1-212ENST00000475684 ABCC8Q09428 1581 aa19.43■□□□□ 0.7
CCHCR1-212ENST00000475684 TARBP1Q13395 1621 aaKnown RBP19.4■□□□□ 0.7
CCHCR1-212ENST00000475684 PHF23Q9BUL5 403 aaPredicted RBP19.37■□□□□ 0.69
CCHCR1-212ENST00000475684 DNMBPQ6XZF7 1577 aa19.36■□□□□ 0.69
CCHCR1-212ENST00000475684 CLASP1Q7Z460 1538 aa19.36■□□□□ 0.69
CCHCR1-212ENST00000475684 ILDR1Q86SU0 546 aaPredicted RBP19.36■□□□□ 0.69
CCHCR1-212ENST00000475684 CHMP7Q8WUX9 453 aaPredicted RBP19.33■□□□□ 0.68
CCHCR1-212ENST00000475684 SYNJ1O43426 1573 aa19.3■□□□□ 0.68
CCHCR1-212ENST00000475684 TDRD9Q8NDG6 1382 aaKnown RBP19.29■□□□□ 0.68
CCHCR1-212ENST00000475684 SNAPC4Q5SXM2 1469 aa19.28■□□□□ 0.68
CCHCR1-212ENST00000475684 CCDC88BA6NC98 1476 aa19.27■□□□□ 0.67
CCHCR1-212ENST00000475684 POLA1P09884 1462 aaPredicted RBP19.27■□□□□ 0.67
CCHCR1-212ENST00000475684 GAPVD1Q14C86 1478 aa19.27■□□□□ 0.67
CCHCR1-212ENST00000475684 RAD54L2Q9Y4B4 1467 aa19.24■□□□□ 0.67
CCHCR1-212ENST00000475684 SOGA1O94964 1423 aa19.21■□□□□ 0.67
CCHCR1-212ENST00000475684 SENP3Q9H4L4 574 aaPredicted RBP19.18■□□□□ 0.66
CCHCR1-212ENST00000475684 MAGI1Q96QZ7 1491 aaPredicted RBP19.17■□□□□ 0.66
CCHCR1-212ENST00000475684 SYNJ2O15056 1496 aa19.14■□□□□ 0.65
CCHCR1-212ENST00000475684 WDR97A6NE52 1622 aa19.12■□□□□ 0.65
CCHCR1-212ENST00000475684 GRIN2BQ13224 1484 aa19.11■□□□□ 0.65
CCHCR1-212ENST00000475684 KDM4FA0A1W2PPD8 638 aa19.06■□□□□ 0.64
CCHCR1-212ENST00000475684 FGD5Q6ZNL6 1462 aa19.03■□□□□ 0.64
CCHCR1-212ENST00000475684 ERCC6L2Q5T890 1561 aa19.03■□□□□ 0.64
CCHCR1-212ENST00000475684 KIF13AQ9H1H9 1805 aa19.02■□□□□ 0.63
CCHCR1-212ENST00000475684 PBRM1Q86U86 1689 aa18.94■□□□□ 0.62
CCHCR1-212ENST00000475684 FAM69CQ0P6D2 419 aa18.93■□□□□ 0.62
CCHCR1-212ENST00000475684 CEP170Q5SW79 1584 aa18.91■□□□□ 0.62
CCHCR1-212ENST00000475684 CUX1P39880 1505 aa18.88■□□□□ 0.61
CCHCR1-212ENST00000475684 GRIN2AQ12879 1464 aa18.85■□□□□ 0.61
CCHCR1-212ENST00000475684 ABCC10Q5T3U5 1492 aa18.84■□□□□ 0.61
CCHCR1-212ENST00000475684 KDM6BO15054 1643 aa18.84■□□□□ 0.61
CCHCR1-212ENST00000475684 NPM1P06748 294 aaKnown RBP eCLIP18.82■□□□□ 0.6
CCHCR1-212ENST00000475684 SHROOM2Q13796 1616 aa18.8■□□□□ 0.6
CCHCR1-212ENST00000475684 NUP160Q12769 1436 aa18.8■□□□□ 0.6
CCHCR1-212ENST00000475684 ABCA5Q8WWZ7 1642 aa18.78■□□□□ 0.6
CCHCR1-212ENST00000475684 ABCA10Q8WWZ4 1543 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms