RNA–Protein interactions for RNA: ENST00000450023.5

NDUFB3-203, Transcript of NADH:ubiquinone oxidoreductase subunit B3, humanhuman

TSL 3

Gene NDUFB3, Length 462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3-203ENST00000450023 NISCHQ9Y2I1 1504 aa17.37■□□□□ 0.37
NDUFB3-203ENST00000450023 ABCC9O60706 1549 aa16.36■□□□□ 0.21
NDUFB3-203ENST00000450023 CCDC180Q9P1Z9 1646 aa15.86■□□□□ 0.13
NDUFB3-203ENST00000450023 DNAJC5BQ9UF47 199 aa15.69■□□□□ 0.1
NDUFB3-203ENST00000450023 RB1CC1Q8TDY2 1594 aa15.38■□□□□ 0.05
NDUFB3-203ENST00000450023 PABPN1Q86U42 306 aaKnown RBP eCLIP15.17■□□□□ 0.02
NDUFB3-203ENST00000450023 DCAF8L2P0C7V8 631 aa15.14■□□□□ 0.01
NDUFB3-203ENST00000450023 NACADO15069 1562 aa15.11■□□□□ 0.01
NDUFB3-203ENST00000450023 UNC13AQ9UPW8 1703 aa14.99□□□□□ -0.01
NDUFB3-203ENST00000450023 DNAJC5Q9H3Z4 198 aa14.88□□□□□ -0.03
NDUFB3-203ENST00000450023 BICRAQ9NZM4 1560 aa14.81□□□□□ -0.04
NDUFB3-203ENST00000450023 CECR2Q9BXF3 1484 aa14.79□□□□□ -0.04
NDUFB3-203ENST00000450023 CC2D2AQ9P2K1 1620 aa14.74□□□□□ -0.05
NDUFB3-203ENST00000450023 CHIC1Q5VXU3 224 aa14.72□□□□□ -0.05
NDUFB3-203ENST00000450023 MYO15BQ96JP2 1530 aa14.66□□□□□ -0.06
NDUFB3-203ENST00000450023 AEBP2Q6ZN18 517 aaPredicted RBP14.65□□□□□ -0.06
NDUFB3-203ENST00000450023 SHROOM4Q9ULL8 1493 aa14.63□□□□□ -0.07
NDUFB3-203ENST00000450023 EIF4G1Q04637 1599 aaKnown RBP14.56□□□□□ -0.08
NDUFB3-203ENST00000450023 SCRIBQ14160 1630 aa14.44□□□□□ -0.1
NDUFB3-203ENST00000450023 ZCCHC6Q5VYS8 1495 aaKnown RBP14.35□□□□□ -0.11
NDUFB3-203ENST00000450023 CUX2O14529 1486 aa14.31□□□□□ -0.12
NDUFB3-203ENST00000450023 DCAF1Q9Y4B6 1507 aa14.3□□□□□ -0.12
NDUFB3-203ENST00000450023 ERCC6Q03468 1493 aa14.25□□□□□ -0.13
NDUFB3-203ENST00000450023 TRIM41Q8WV44 630 aa14.14□□□□□ -0.15
NDUFB3-203ENST00000450023 NCAPD3P42695 1498 aa13.91□□□□□ -0.18
NDUFB3-203ENST00000450023 NESP48681 1621 aa13.86□□□□□ -0.19
NDUFB3-203ENST00000450023 SMARCA2P51531 1590 aa13.8□□□□□ -0.2
NDUFB3-203ENST00000450023 THOC2Q8NI27 1593 aaKnown RBP13.8□□□□□ -0.2
NDUFB3-203ENST00000450023 ATAD2BQ9ULI0 1458 aa13.8□□□□□ -0.2
NDUFB3-203ENST00000450023 HMGXB3Q12766 1538 aa13.77□□□□□ -0.21
NDUFB3-203ENST00000450023 LAMC3Q9Y6N6 1575 aa13.75□□□□□ -0.21
NDUFB3-203ENST00000450023 PDS5BQ9NTI5 1447 aa13.73□□□□□ -0.21
NDUFB3-203ENST00000450023 KIF21AQ7Z4S6 1674 aa13.72□□□□□ -0.21
NDUFB3-203ENST00000450023 BAZ1BQ9UIG0 1483 aaKnown RBP13.71□□□□□ -0.21
NDUFB3-203ENST00000450023 SMARCA4P51532 1647 aa13.68□□□□□ -0.22
NDUFB3-203ENST00000450023 OSCARQ8IYS5 282 aa13.66□□□□□ -0.22
NDUFB3-203ENST00000450023 BAZ1AQ9NRL2 1556 aaPredicted RBP13.64□□□□□ -0.23
NDUFB3-203ENST00000450023 MRC2Q9UBG0 1479 aa13.57□□□□□ -0.24
NDUFB3-203ENST00000450023 WDR62O43379 1518 aa13.52□□□□□ -0.25
NDUFB3-203ENST00000450023 CADPSQ9ULU8 1353 aa13.5□□□□□ -0.25
NDUFB3-203ENST00000450023 PEG3Q9GZU2 1588 aa13.49□□□□□ -0.25
NDUFB3-203ENST00000450023 TRHP20396 242 aaPredicted RBP13.49□□□□□ -0.25
NDUFB3-203ENST00000450023 RIMBP3CA6NJZ7 1639 aa13.46□□□□□ -0.26
NDUFB3-203ENST00000450023 RIMBP3BA6NNM3 1639 aa13.46□□□□□ -0.26
NDUFB3-203ENST00000450023 RIMBP3Q9UFD9 1639 aa13.46□□□□□ -0.26
NDUFB3-203ENST00000450023 CEP164Q9UPV0 1460 aa13.45□□□□□ -0.26
NDUFB3-203ENST00000450023 CYB5RLQ6IPT4 315 aa13.38□□□□□ -0.27
NDUFB3-203ENST00000450023 MROH2BQ7Z745 1585 aa13.37□□□□□ -0.27
NDUFB3-203ENST00000450023 FANCD2Q9BXW9 1451 aa13.36□□□□□ -0.27
NDUFB3-203ENST00000450023 ARHGEF11O15085 1522 aa13.34□□□□□ -0.27
NDUFB3-203ENST00000450023 WIZO95785 1651 aa13.28□□□□□ -0.28
NDUFB3-203ENST00000450023 URB2Q14146 1524 aaKnown RBP13.22□□□□□ -0.29
NDUFB3-203ENST00000450023 FBLN2P98095 1184 aa13.2□□□□□ -0.3
NDUFB3-203ENST00000450023 CFTRP13569 1480 aa13.2□□□□□ -0.3
NDUFB3-203ENST00000450023 IFT140Q96RY7 1462 aa13.18□□□□□ -0.3
NDUFB3-203ENST00000450023 ZNF608Q9ULD9 1512 aaPredicted RBP13.15□□□□□ -0.3
NDUFB3-203ENST00000450023 CHD1O14646 1710 aa13.13□□□□□ -0.31
NDUFB3-203ENST00000450023 ARAP1Q96P48 1450 aa13.13□□□□□ -0.31
NDUFB3-203ENST00000450023 PRDM2Q13029 1718 aa13.13□□□□□ -0.31
NDUFB3-203ENST00000450023 RSF1Q96T23 1441 aaPredicted RBP13.1□□□□□ -0.31
NDUFB3-203ENST00000450023 EIF4G3O43432 1585 aaKnown RBP13.1□□□□□ -0.31
NDUFB3-203ENST00000450023 ABCC8Q09428 1581 aa13.06□□□□□ -0.32
NDUFB3-203ENST00000450023 TOP2AP11388 1531 aaKnown RBP13.03□□□□□ -0.32
NDUFB3-203ENST00000450023 PHF23Q9BUL5 403 aaPredicted RBP13.03□□□□□ -0.32
NDUFB3-203ENST00000450023 TOPBP1Q92547 1522 aa13.03□□□□□ -0.32
NDUFB3-203ENST00000450023 AQRO60306 1485 aaKnown RBP eCLIP13.01□□□□□ -0.33
NDUFB3-203ENST00000450023 CHMP7Q8WUX9 453 aaPredicted RBP12.98□□□□□ -0.33
NDUFB3-203ENST00000450023 SYNJ1O43426 1573 aa12.95□□□□□ -0.34
NDUFB3-203ENST00000450023 DNMBPQ6XZF7 1577 aa12.95□□□□□ -0.34
NDUFB3-203ENST00000450023 TARBP1Q13395 1621 aaKnown RBP12.92□□□□□ -0.34
NDUFB3-203ENST00000450023 CCDC88BA6NC98 1476 aa12.9□□□□□ -0.34
NDUFB3-203ENST00000450023 CLASP1Q7Z460 1538 aa12.88□□□□□ -0.35
NDUFB3-203ENST00000450023 SNAPC4Q5SXM2 1469 aa12.87□□□□□ -0.35
NDUFB3-203ENST00000450023 TDRD9Q8NDG6 1382 aaKnown RBP12.86□□□□□ -0.35
NDUFB3-203ENST00000450023 SOGA1O94964 1423 aa12.86□□□□□ -0.35
NDUFB3-203ENST00000450023 GAPVD1Q14C86 1478 aa12.85□□□□□ -0.35
NDUFB3-203ENST00000450023 POLA1P09884 1462 aaPredicted RBP12.85□□□□□ -0.35
NDUFB3-203ENST00000450023 ILDR1Q86SU0 546 aaPredicted RBP12.84□□□□□ -0.35
NDUFB3-203ENST00000450023 MAGI1Q96QZ7 1491 aaPredicted RBP12.83□□□□□ -0.36
NDUFB3-203ENST00000450023 RAD54L2Q9Y4B4 1467 aa12.83□□□□□ -0.36
NDUFB3-203ENST00000450023 WDR97A6NE52 1622 aa12.82□□□□□ -0.36
NDUFB3-203ENST00000450023 SYNJ2O15056 1496 aa12.78□□□□□ -0.36
NDUFB3-203ENST00000450023 GRIN2BQ13224 1484 aa12.78□□□□□ -0.36
NDUFB3-203ENST00000450023 SUPT5HO00267 1087 aaKnown RBP12.75□□□□□ -0.37
NDUFB3-203ENST00000450023 PBRM1Q86U86 1689 aa12.73□□□□□ -0.37
NDUFB3-203ENST00000450023 FGD5Q6ZNL6 1462 aa12.72□□□□□ -0.37
NDUFB3-203ENST00000450023 NPM1P06748 294 aaKnown RBP eCLIP12.72□□□□□ -0.37
NDUFB3-203ENST00000450023 KIF13AQ9H1H9 1805 aa12.71□□□□□ -0.38
NDUFB3-203ENST00000450023 FAM69CQ0P6D2 419 aa12.68□□□□□ -0.38
NDUFB3-203ENST00000450023 KDM4FA0A1W2PPD8 638 aa12.64□□□□□ -0.39
NDUFB3-203ENST00000450023 ERCC6L2Q5T890 1561 aa12.63□□□□□ -0.39
NDUFB3-203ENST00000450023 CEP170Q5SW79 1584 aa12.62□□□□□ -0.39
NDUFB3-203ENST00000450023 KDM6BO15054 1643 aa12.62□□□□□ -0.39
NDUFB3-203ENST00000450023 GRIN2AQ12879 1464 aa12.59□□□□□ -0.39
NDUFB3-203ENST00000450023 CUX1P39880 1505 aa12.58□□□□□ -0.4
NDUFB3-203ENST00000450023 TSPOAP1O95153 1857 aa12.58□□□□□ -0.4
NDUFB3-203ENST00000450023 ABCC10Q5T3U5 1492 aa12.56□□□□□ -0.4
NDUFB3-203ENST00000450023 ABCA5Q8WWZ7 1642 aa12.54□□□□□ -0.4
NDUFB3-203ENST00000450023 SHROOM2Q13796 1616 aa12.53□□□□□ -0.4
NDUFB3-203ENST00000450023 PRG4Q92954 1404 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms