RNA–Protein interactions for RNA: ENST00000445470.6

CPA4-202, Transcript of carboxypeptidase A4, humanhuman

TSL 2 BASIC

Gene CPA4, Length 2,718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-202ENST00000445470 NISCHQ9Y2I1 1504 aa20.06■□□□□ 0.8
CPA4-202ENST00000445470 CCDC180Q9P1Z9 1646 aa18.16■□□□□ 0.5
CPA4-202ENST00000445470 ABCC9O60706 1549 aa18.08■□□□□ 0.48
CPA4-202ENST00000445470 RB1CC1Q8TDY2 1594 aa17.29■□□□□ 0.36
CPA4-202ENST00000445470 NACADO15069 1562 aa17.17■□□□□ 0.34
CPA4-202ENST00000445470 DNAJC5BQ9UF47 199 aa17.05■□□□□ 0.32
CPA4-202ENST00000445470 MYO15BQ96JP2 1530 aa16.97■□□□□ 0.31
CPA4-202ENST00000445470 UNC13AQ9UPW8 1703 aa16.87■□□□□ 0.29
CPA4-202ENST00000445470 BICRAQ9NZM4 1560 aa16.76■□□□□ 0.27
CPA4-202ENST00000445470 PABPN1Q86U42 306 aaKnown RBP eCLIP16.75■□□□□ 0.27
CPA4-202ENST00000445470 DCAF8L2P0C7V8 631 aa16.74■□□□□ 0.27
CPA4-202ENST00000445470 SHROOM4Q9ULL8 1493 aa16.68■□□□□ 0.26
CPA4-202ENST00000445470 DCAF1Q9Y4B6 1507 aa16.67■□□□□ 0.26
CPA4-202ENST00000445470 ZCCHC6Q5VYS8 1495 aaKnown RBP16.61■□□□□ 0.25
CPA4-202ENST00000445470 CC2D2AQ9P2K1 1620 aa16.41■□□□□ 0.22
CPA4-202ENST00000445470 SCRIBQ14160 1630 aa16.38■□□□□ 0.21
CPA4-202ENST00000445470 CECR2Q9BXF3 1484 aa16.36■□□□□ 0.21
CPA4-202ENST00000445470 EIF4G1Q04637 1599 aaKnown RBP16.36■□□□□ 0.21
CPA4-202ENST00000445470 DNAJC5Q9H3Z4 198 aa15.84■□□□□ 0.13
CPA4-202ENST00000445470 NCAPD3P42695 1498 aa15.83■□□□□ 0.12
CPA4-202ENST00000445470 CUX2O14529 1486 aa15.8■□□□□ 0.12
CPA4-202ENST00000445470 HMGXB3Q12766 1538 aa15.73■□□□□ 0.11
CPA4-202ENST00000445470 ATAD2BQ9ULI0 1458 aa15.72■□□□□ 0.11
CPA4-202ENST00000445470 SMARCA2P51531 1590 aa15.71■□□□□ 0.11
CPA4-202ENST00000445470 SMARCA4P51532 1647 aa15.68■□□□□ 0.1
CPA4-202ENST00000445470 ERCC6Q03468 1493 aa15.66■□□□□ 0.1
CPA4-202ENST00000445470 PEG3Q9GZU2 1588 aa15.61■□□□□ 0.09
CPA4-202ENST00000445470 BAZ1AQ9NRL2 1556 aaPredicted RBP15.6■□□□□ 0.09
CPA4-202ENST00000445470 BAZ1BQ9UIG0 1483 aaKnown RBP15.54■□□□□ 0.08
CPA4-202ENST00000445470 LAMC3Q9Y6N6 1575 aa15.5■□□□□ 0.07
CPA4-202ENST00000445470 NESP48681 1621 aa15.49■□□□□ 0.07
CPA4-202ENST00000445470 THOC2Q8NI27 1593 aaKnown RBP15.48■□□□□ 0.07
CPA4-202ENST00000445470 MROH2BQ7Z745 1585 aa15.4■□□□□ 0.06
CPA4-202ENST00000445470 PDS5BQ9NTI5 1447 aa15.38■□□□□ 0.05
CPA4-202ENST00000445470 KIF21AQ7Z4S6 1674 aa15.36■□□□□ 0.05
CPA4-202ENST00000445470 CADPSQ9ULU8 1353 aa15.29■□□□□ 0.04
CPA4-202ENST00000445470 MRC2Q9UBG0 1479 aa15.26■□□□□ 0.03
CPA4-202ENST00000445470 WDR62O43379 1518 aa15.26■□□□□ 0.03
CPA4-202ENST00000445470 WIZO95785 1651 aa15.2■□□□□ 0.02
CPA4-202ENST00000445470 CEP164Q9UPV0 1460 aa15.15■□□□□ 0.02
CPA4-202ENST00000445470 CFTRP13569 1480 aa15.11■□□□□ 0.01
CPA4-202ENST00000445470 FANCD2Q9BXW9 1451 aa15.1■□□□□ 0.01
CPA4-202ENST00000445470 TOP2AP11388 1531 aaKnown RBP15.08■□□□□ 0
CPA4-202ENST00000445470 RSF1Q96T23 1441 aaPredicted RBP15.04■□□□□ -0
CPA4-202ENST00000445470 HRCP23327 699 aa15.02□□□□□ -0.01
CPA4-202ENST00000445470 PRDM2Q13029 1718 aa15.02□□□□□ -0.01
CPA4-202ENST00000445470 URB2Q14146 1524 aaKnown RBP14.99□□□□□ -0.01
CPA4-202ENST00000445470 TRIM41Q8WV44 630 aa14.95□□□□□ -0.02
CPA4-202ENST00000445470 OSCARQ8IYS5 282 aa14.94□□□□□ -0.02
CPA4-202ENST00000445470 IFT140Q96RY7 1462 aa14.88□□□□□ -0.03
CPA4-202ENST00000445470 ABCC8Q09428 1581 aa14.85□□□□□ -0.03
CPA4-202ENST00000445470 CCDC88BA6NC98 1476 aa14.85□□□□□ -0.03
CPA4-202ENST00000445470 TOPBP1Q92547 1522 aa14.81□□□□□ -0.04
CPA4-202ENST00000445470 PPARGC1BQ86YN6 1023 aaKnown RBP14.8□□□□□ -0.04
CPA4-202ENST00000445470 RIMBP3CA6NJZ7 1639 aa14.8□□□□□ -0.04
CPA4-202ENST00000445470 RIMBP3BA6NNM3 1639 aa14.8□□□□□ -0.04
CPA4-202ENST00000445470 RIMBP3Q9UFD9 1639 aa14.8□□□□□ -0.04
CPA4-202ENST00000445470 DNMBPQ6XZF7 1577 aa14.79□□□□□ -0.04
CPA4-202ENST00000445470 ZNF608Q9ULD9 1512 aaPredicted RBP14.78□□□□□ -0.04
CPA4-202ENST00000445470 EIF4G3O43432 1585 aaKnown RBP14.75□□□□□ -0.05
CPA4-202ENST00000445470 TARBP1Q13395 1621 aaKnown RBP14.72□□□□□ -0.05
CPA4-202ENST00000445470 ARHGEF11O15085 1522 aa14.72□□□□□ -0.05
CPA4-202ENST00000445470 PCGF6Q9BYE7 350 aa14.69□□□□□ -0.06
CPA4-202ENST00000445470 WDR97A6NE52 1622 aa14.68□□□□□ -0.06
CPA4-202ENST00000445470 CHD1O14646 1710 aa14.66□□□□□ -0.06
CPA4-202ENST00000445470 POLA1P09884 1462 aaPredicted RBP14.64□□□□□ -0.07
CPA4-202ENST00000445470 AQRO60306 1485 aaKnown RBP eCLIP14.62□□□□□ -0.07
CPA4-202ENST00000445470 SUPT5HO00267 1087 aaKnown RBP14.6□□□□□ -0.07
CPA4-202ENST00000445470 PELP1Q8IZL8 1130 aaKnown RBP14.58□□□□□ -0.08
CPA4-202ENST00000445470 ARAP1Q96P48 1450 aa14.57□□□□□ -0.08
CPA4-202ENST00000445470 SOGA1O94964 1423 aa14.56□□□□□ -0.08
CPA4-202ENST00000445470 CLASP1Q7Z460 1538 aa14.54□□□□□ -0.08
CPA4-202ENST00000445470 RAD54L2Q9Y4B4 1467 aa14.54□□□□□ -0.08
CPA4-202ENST00000445470 MAGI1Q96QZ7 1491 aaPredicted RBP14.53□□□□□ -0.08
CPA4-202ENST00000445470 FGD5Q6ZNL6 1462 aa14.52□□□□□ -0.09
CPA4-202ENST00000445470 CYB5RLQ6IPT4 315 aa14.51□□□□□ -0.09
CPA4-202ENST00000445470 SNAPC4Q5SXM2 1469 aa14.51□□□□□ -0.09
CPA4-202ENST00000445470 SYNJ1O43426 1573 aa14.51□□□□□ -0.09
CPA4-202ENST00000445470 CUX1P39880 1505 aa14.5□□□□□ -0.09
CPA4-202ENST00000445470 GRIN2BQ13224 1484 aa14.49□□□□□ -0.09
CPA4-202ENST00000445470 TDRD9Q8NDG6 1382 aaKnown RBP14.48□□□□□ -0.09
CPA4-202ENST00000445470 SYNJ2O15056 1496 aa14.46□□□□□ -0.09
CPA4-202ENST00000445470 FBLN2P98095 1184 aa14.46□□□□□ -0.09
CPA4-202ENST00000445470 PBRM1Q86U86 1689 aa14.44□□□□□ -0.1
CPA4-202ENST00000445470 CHMP7Q8WUX9 453 aaPredicted RBP14.42□□□□□ -0.1
CPA4-202ENST00000445470 ABCA5Q8WWZ7 1642 aa14.41□□□□□ -0.1
CPA4-202ENST00000445470 ABCA10Q8WWZ4 1543 aa14.4□□□□□ -0.1
CPA4-202ENST00000445470 CHIC1Q5VXU3 224 aa14.4□□□□□ -0.1
CPA4-202ENST00000445470 GAPVD1Q14C86 1478 aa14.39□□□□□ -0.11
CPA4-202ENST00000445470 TRHP20396 242 aaPredicted RBP14.38□□□□□ -0.11
CPA4-202ENST00000445470 SCAF1Q9H7N4 1312 aaKnown RBP14.34□□□□□ -0.11
CPA4-202ENST00000445470 BIVM-ERCC5R4GMW8 1640 aa14.3□□□□□ -0.12
CPA4-202ENST00000445470 ADAMTS12P58397 1594 aa14.29□□□□□ -0.12
CPA4-202ENST00000445470 GRIN2AQ12879 1464 aa14.29□□□□□ -0.12
CPA4-202ENST00000445470 NUP160Q12769 1436 aa14.28□□□□□ -0.12
CPA4-202ENST00000445470 WRNQ14191 1432 aaPredicted RBP eCLIP14.28□□□□□ -0.12
CPA4-202ENST00000445470 TOP2BQ02880 1626 aa14.27□□□□□ -0.12
CPA4-202ENST00000445470 SHROOM2Q13796 1616 aa14.27□□□□□ -0.13
CPA4-202ENST00000445470 ERICH3Q5RHP9 1530 aa14.24□□□□□ -0.13
CPA4-202ENST00000445470 CEP170Q5SW79 1584 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms