RNA–Protein interactions for RNA: YMR104C

YPK2, Transcript of Protein kinase similar to serine/threonine protein kinase Ypk1p, yeast

Gene YPK2, Length 2,034 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPK2	YMR104C	FYV10	P40492	516 aa		6.6	□□□□□ -1.35
YPK2	YMR104C	IRC4	Q03036	179 aa		6.6	□□□□□ -1.35
YPK2	YMR104C	HCA4	P20448	770 aa	Known RBP	6.6	□□□□□ -1.35
YPK2	YMR104C	CBP3	P21560	335 aa		6.6	□□□□□ -1.35
YPK2	YMR104C	KRE2	P27809	442 aa		6.6	□□□□□ -1.35
YPK2	YMR104C	PTK1	P36002	662 aa	Predicted RBP	6.6	□□□□□ -1.35
YPK2	YMR104C	CAB3	P36076	571 aa		6.6	□□□□□ -1.35
YPK2	YMR104C	RRM3	P38766	723 aa		6.6	□□□□□ -1.35
YPK2	YMR104C	SPL2	P38839	148 aa		6.6	□□□□□ -1.35
YPK2	YMR104C	YER130C	P39959	443 aa		6.6	□□□□□ -1.35
YPK2	YMR104C	ALG12	P53730	551 aa		6.6	□□□□□ -1.35
YPK2	YMR104C	RPS15	Q01855	142 aa	Known RBP	6.6	□□□□□ -1.35
YPK2	YMR104C	MRD1	Q06106	887 aa	Known RBP	6.6	□□□□□ -1.35
YPK2	YMR104C	CSC1	Q06538	782 aa		6.6	□□□□□ -1.35
YPK2	YMR104C	FAS2	P19097	1887 aa	Known RBP	6.6	□□□□□ -1.35
YPK2	YMR104C	SES1	P07284	462 aa	Known RBP	6.59	□□□□□ -1.35
YPK2	YMR104C	GPA1	P08539	472 aa		6.59	□□□□□ -1.35
YPK2	YMR104C	ISF1	P32488	338 aa		6.59	□□□□□ -1.35
YPK2	YMR104C	MDL2	P33311	773 aa		6.59	□□□□□ -1.35
YPK2	YMR104C	BMH2	P34730	273 aa	Known RBP	6.59	□□□□□ -1.35
YPK2	YMR104C	MPE1	P35728	441 aa	Known RBP	6.59	□□□□□ -1.35
YPK2	YMR104C	YKT6	P36015	200 aa	Known RBP	6.59	□□□□□ -1.35
YPK2	YMR104C	RFT1	P38206	574 aa	Predicted RBP	6.59	□□□□□ -1.35
YPK2	YMR104C	RPN10	P38886	268 aa	Known RBP	6.59	□□□□□ -1.35
YPK2	YMR104C	AKR1	P39010	764 aa		6.59	□□□□□ -1.35
YPK2	YMR104C	CTH1	P47976	325 aa		6.59	□□□□□ -1.35
YPK2	YMR104C	YPT11	P48559	417 aa		6.59	□□□□□ -1.35
YPK2	YMR104C	FIG2	P25653	1609 aa		6.59	□□□□□ -1.35
YPK2	YMR104C	HXK1	P04806	485 aa	Known RBP	6.59	□□□□□ -1.36
YPK2	YMR104C	RGP1	P16664	663 aa		6.59	□□□□□ -1.36
YPK2	YMR104C	RPT3	P33298	428 aa	Known RBP	6.59	□□□□□ -1.36
YPK2	YMR104C	PFF1	P38244	976 aa		6.59	□□□□□ -1.36
YPK2	YMR104C	YFH7	P43591	353 aa		6.59	□□□□□ -1.36
YPK2	YMR104C	JJJ2	P46997	583 aa		6.59	□□□□□ -1.36
YPK2	YMR104C	VMS1	Q04311	632 aa	Known RBP	6.59	□□□□□ -1.36
YPK2	YMR104C	PNP1	Q05788	311 aa		6.59	□□□□□ -1.36
YPK2	YMR104C	CHO2	P05374	869 aa	Known RBP	6.58	□□□□□ -1.36
YPK2	YMR104C	CAF20	P12962	161 aa	Known RBP	6.58	□□□□□ -1.36
YPK2	YMR104C	CYC8	P14922	966 aa		6.58	□□□□□ -1.36
YPK2	YMR104C	LCB1	P25045	558 aa	Known RBP	6.58	□□□□□ -1.36
YPK2	YMR104C	RTS1	P38903	757 aa		6.58	□□□□□ -1.36
YPK2	YMR104C	GTT3	P39996	337 aa		6.58	□□□□□ -1.36
YPK2	YMR104C	ALG2	P43636	503 aa		6.58	□□□□□ -1.36
YPK2	YMR104C	PIP2	P52960	996 aa		6.58	□□□□□ -1.36
YPK2	YMR104C	ROM1	P53046	1155 aa		6.58	□□□□□ -1.36
YPK2	YMR104C	TFC6	Q06339	672 aa		6.58	□□□□□ -1.36
YPK2	YMR104C	PMD1	P32634	1753 aa		6.58	□□□□□ -1.36
YPK2	YMR104C	ANP1	P32629	500 aa		6.57	□□□□□ -1.36
YPK2	YMR104C	PPG1	P32838	368 aa		6.57	□□□□□ -1.36
YPK2	YMR104C	MAL31	P38156	614 aa		6.57	□□□□□ -1.36
YPK2	YMR104C	SLI15	P38283	698 aa		6.57	□□□□□ -1.36
YPK2	YMR104C	ALD6	P54115	500 aa	Known RBP	6.57	□□□□□ -1.36
YPK2	YMR104C	SSL2	Q00578	843 aa		6.57	□□□□□ -1.36
YPK2	YMR104C	SLY41	P22215	453 aa		6.57	□□□□□ -1.36
YPK2	YMR104C	TSR4	P25040	408 aa		6.57	□□□□□ -1.36
YPK2	YMR104C	SWI4	P25302	1093 aa	Known RBP	6.57	□□□□□ -1.36
YPK2	YMR104C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	6.57	□□□□□ -1.36	not detected
YPK2	YMR104C	MSH4	P40965	878 aa	Predicted RBP	6.57	□□□□□ -1.36
YPK2	YMR104C	TFG2	P41896	400 aa	Predicted RBP	6.56	□□□□□ -1.36
YPK2	YMR104C	TIM50	Q02776	476 aa		6.56	□□□□□ -1.36
YPK2	YMR104C	GDE1	Q02979	1223 aa		6.56	□□□□□ -1.36
YPK2	YMR104C	ERO1	Q03103	563 aa		6.56	□□□□□ -1.36
YPK2	YMR104C	VPS16	Q03308	798 aa		6.56	□□□□□ -1.36
YPK2	YMR104C	RPN4	Q03465	531 aa		6.56	□□□□□ -1.36
YPK2	YMR104C	NBL1	Q3E7Y6	73 aa		6.56	□□□□□ -1.36
YPK2	YMR104C	AI4	P03878	556 aa		6.55	□□□□□ -1.36
YPK2	YMR104C	RPL22A	P05749	121 aa	Known RBP	6.55	□□□□□ -1.36
YPK2	YMR104C	SRP40	P32583	406 aa	Predicted RBP	6.55	□□□□□ -1.36
YPK2	YMR104C	UGA2	P38067	497 aa		6.55	□□□□□ -1.36
YPK2	YMR104C	YBL086C	P38177	466 aa		6.55	□□□□□ -1.36
YPK2	YMR104C	NOC2	P39744	710 aa	Known RBP	6.55	□□□□□ -1.36
YPK2	YMR104C	QDR1	P40475	563 aa		6.55	□□□□□ -1.36
YPK2	YMR104C	ACF4	P47129	309 aa		6.55	□□□□□ -1.36
YPK2	YMR104C	GPI13	Q07830	1017 aa		6.55	□□□□□ -1.36
YPK2	YMR104C	YPL260W	Q08977	551 aa		6.55	□□□□□ -1.36
YPK2	YMR104C	GET3	Q12154	354 aa	Known RBP	6.55	□□□□□ -1.36
YPK2	YMR104C	TRM1	P15565	570 aa	Known RBP	6.55	□□□□□ -1.36
YPK2	YMR104C	GSY2	P27472	705 aa		6.55	□□□□□ -1.36
YPK2	YMR104C	MYO3	P36006	1272 aa		6.55	□□□□□ -1.36
YPK2	YMR104C	MGE1	P38523	228 aa		6.55	□□□□□ -1.36
YPK2	YMR104C	TCB2	P48231	1178 aa		6.55	□□□□□ -1.36
YPK2	YMR104C	ACS2	P52910	683 aa	Known RBP	6.55	□□□□□ -1.36
YPK2	YMR104C	WRS1	Q12109	432 aa	Known RBP	6.55	□□□□□ -1.36
YPK2	YMR104C	DCS2	Q12123	353 aa		6.55	□□□□□ -1.36
YPK2	YMR104C	PDR1	P12383	1068 aa		6.54	□□□□□ -1.36
YPK2	YMR104C	RNR3	P21672	869 aa	Known RBP	6.54	□□□□□ -1.36
YPK2	YMR104C	MAK31	P23059	88 aa		6.54	□□□□□ -1.36
YPK2	YMR104C	RIT1	P23796	513 aa		6.54	□□□□□ -1.36
YPK2	YMR104C	SMY1	P32364	656 aa	Known RBP	6.54	□□□□□ -1.36
YPK2	YMR104C	RRP14	P36080	434 aa	Known RBP	6.54	□□□□□ -1.36
YPK2	YMR104C	RXT2	P38255	430 aa		6.54	□□□□□ -1.36
YPK2	YMR104C	EMP47	P43555	445 aa		6.54	□□□□□ -1.36
YPK2	YMR104C	STU2	P46675	888 aa		6.54	□□□□□ -1.36
YPK2	YMR104C	HDA1	P53973	706 aa		6.54	□□□□□ -1.36
YPK2	YMR104C	SPR28	Q04921	423 aa		6.54	□□□□□ -1.36
YPK2	YMR104C	PIN2	Q12057	282 aa		6.54	□□□□□ -1.36
YPK2	YMR104C	CEX1	Q12453	761 aa		6.54	□□□□□ -1.36
YPK2	YMR104C	RAD61	Q99359	647 aa		6.54	□□□□□ -1.36
YPK2	YMR104C	CDC6	P09119	513 aa		6.54	□□□□□ -1.36
YPK2	YMR104C	MCM4	P30665	933 aa	Known RBP	6.54	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms