RNA–Protein interactions for RNA: YMR050C

YMR050C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YMR050C, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR050CYMR050C CCE1Q03702 353 aa2.9□□□□□ -1.95
YMR050CYMR050C VTA1Q06263 330 aa2.9□□□□□ -1.95
YMR050CYMR050C SNQ2P32568 1501 aaKnown RBP2.9□□□□□ -1.95
YMR050CYMR050C MAS1P10507 462 aa2.9□□□□□ -1.95
YMR050CYMR050C RGP1P16664 663 aa2.9□□□□□ -1.95
YMR050CYMR050C YKL075CP36083 450 aa2.9□□□□□ -1.95
YMR050CYMR050C IFA38P38286 347 aa2.9□□□□□ -1.95
YMR050CYMR050C ERG7P38604 731 aa2.9□□□□□ -1.95
YMR050CYMR050C FTR1P40088 404 aa2.9□□□□□ -1.95
YMR050CYMR050C EMP47P43555 445 aa2.9□□□□□ -1.95
YMR050CYMR050C YML020WQ03722 664 aa2.9□□□□□ -1.95
YMR050CYMR050C SHE9Q04172 456 aa2.9□□□□□ -1.95
YMR050CYMR050C SMD2Q06217 110 aaKnown RBP2.9□□□□□ -1.95
YMR050CYMR050C BSP1Q06604 576 aa2.9□□□□□ -1.95
YMR050CYMR050C TIP41Q12199 356 aa2.9□□□□□ -1.95
YMR050CYMR050C LAT1P12695 482 aaKnown RBP2.9□□□□□ -1.95
YMR050CYMR050C APE3P37302 537 aaKnown RBP2.9□□□□□ -1.95
YMR050CYMR050C HSM3P38348 480 aa2.9□□□□□ -1.95
YMR050CYMR050C NOP13P53883 403 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
YMR050CYMR050C GIM3P53900 129 aa2.9□□□□□ -1.95
YMR050CYMR050C YMR265CQ03508 461 aaKnown RBP2.9□□□□□ -1.95
YMR050CYMR050C PRP42Q03776 544 aaKnown RBP2.9□□□□□ -1.95
YMR050CYMR050C HIR3P47171 1648 aa2.89□□□□□ -1.95
YMR050CYMR050C IKI3Q06706 1349 aaKnown RBP2.89□□□□□ -1.95
YMR050CYMR050C ICL1P28240 557 aaPredicted RBP2.89□□□□□ -1.95
YMR050CYMR050C AKL1P38080 1108 aaKnown RBP2.89□□□□□ -1.95
YMR050CYMR050C OLA1P38219 394 aaKnown RBP2.89□□□□□ -1.95
YMR050CYMR050C CTM1P38818 585 aa2.89□□□□□ -1.95
YMR050CYMR050C NOC2P39744 710 aaKnown RBP2.89□□□□□ -1.95
YMR050CYMR050C LAM5P43560 674 aa2.89□□□□□ -1.95
YMR050CYMR050C YOL098CQ12496 1037 aa2.89□□□□□ -1.95
YMR050CYMR050C OM45P16547 393 aa2.89□□□□□ -1.95
YMR050CYMR050C HEM3P28789 327 aa2.89□□□□□ -1.95
YMR050CYMR050C SMI1P32566 505 aa2.89□□□□□ -1.95
YMR050CYMR050C UBP13P38187 747 aa2.89□□□□□ -1.95
YMR050CYMR050C ACA1P39970 489 aa2.89□□□□□ -1.95
YMR050CYMR050C PEX15Q08215 383 aa2.89□□□□□ -1.95
YMR050CYMR050C DNL4Q08387 944 aaPredicted RBP2.89□□□□□ -1.95
YMR050CYMR050C DBP5P20449 482 aaKnown RBP2.89□□□□□ -1.95
YMR050CYMR050C SIT4P20604 311 aa2.89□□□□□ -1.95
YMR050CYMR050C MEI4P29467 408 aa2.89□□□□□ -1.95
YMR050CYMR050C EFB1P32471 206 aaKnown RBP2.89□□□□□ -1.95
YMR050CYMR050C GPB2P39717 880 aa2.89□□□□□ -1.95
YMR050CYMR050C BUD16P39988 312 aa2.89□□□□□ -1.95
YMR050CYMR050C RTT105P40063 208 aa2.89□□□□□ -1.95
YMR050CYMR050C IRC8P47046 822 aa2.89□□□□□ -1.95
YMR050CYMR050C SHE10P53075 577 aa2.89□□□□□ -1.95
YMR050CYMR050C BIO5P53744 561 aaKnown RBP2.89□□□□□ -1.95
YMR050CYMR050C GDE1Q02979 1223 aa2.89□□□□□ -1.95
YMR050CYMR050C NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
YMR050CYMR050C CSC1Q06538 782 aa2.89□□□□□ -1.95
YMR050CYMR050C TSR1Q07381 788 aaKnown RBP2.89□□□□□ -1.95
YMR050CYMR050C ATG20Q07528 640 aa2.89□□□□□ -1.95
YMR050CYMR050C MSD1P15179 658 aaKnown RBP2.89□□□□□ -1.95
YMR050CYMR050C NDI1P32340 513 aa2.89□□□□□ -1.95
YMR050CYMR050C VPH1P32563 840 aaKnown RBP2.89□□□□□ -1.95
YMR050CYMR050C SSE1P32589 693 aaKnown RBP2.89□□□□□ -1.95
YMR050CYMR050C RFC1P38630 861 aaKnown RBP2.89□□□□□ -1.95
YMR050CYMR050C MXR1P40029 184 aa2.89□□□□□ -1.95
YMR050CYMR050C FAU1P40099 211 aa2.89□□□□□ -1.95
YMR050CYMR050C TPO2P53283 614 aa2.89□□□□□ -1.95
YMR050CYMR050C VPS62P53285 467 aa2.89□□□□□ -1.95
YMR050CYMR050C ENT2Q05785 613 aa2.89□□□□□ -1.95
YMR050CYMR050C RGA2Q06407 1009 aa2.89□□□□□ -1.95
YMR050CYMR050C DIS3Q08162 1001 aaKnown RBP2.89□□□□□ -1.95
YMR050CYMR050C TMA17Q12513 150 aa2.89□□□□□ -1.95
YMR050CYMR050C RPB2P08518 1224 aaKnown RBP2.88□□□□□ -1.95
YMR050CYMR050C HES1P35843 434 aa2.88□□□□□ -1.95
YMR050CYMR050C SRP68P38687 599 aaKnown RBP2.88□□□□□ -1.95
YMR050CYMR050C KAP123P40069 1113 aaKnown RBP2.88□□□□□ -1.95
YMR050CYMR050C PIL1P53252 339 aaKnown RBP2.88□□□□□ -1.95
YMR050CYMR050C DBP6P53734 629 aaKnown RBP2.88□□□□□ -1.95
YMR050CYMR050C YLR001CQ07895 862 aa2.88□□□□□ -1.95
YMR050CYMR050C AUS1Q08409 1394 aa2.88□□□□□ -1.95
YMR050CYMR050C RPS6AP0CX37 236 aaKnown RBP2.88□□□□□ -1.95
YMR050CYMR050C RPS6BP0CX38 236 aaPredicted RBP2.88□□□□□ -1.95
YMR050CYMR050C MRPL32P25348 183 aa2.88□□□□□ -1.95
YMR050CYMR050C NIP100P33420 868 aa2.88□□□□□ -1.95
YMR050CYMR050C SPC34P36131 295 aa2.88□□□□□ -1.95
YMR050CYMR050C MRPL40P36534 297 aa2.88□□□□□ -1.95
YMR050CYMR050C YHL044WP38727 235 aa2.88□□□□□ -1.95
YMR050CYMR050C VAC8P39968 578 aa2.88□□□□□ -1.95
YMR050CYMR050C PSY2P40164 858 aa2.88□□□□□ -1.95
YMR050CYMR050C NET1P47035 1189 aa2.88□□□□□ -1.95
YMR050CYMR050C MDE1P47095 244 aa2.88□□□□□ -1.95
YMR050CYMR050C HXT16P47185 567 aa2.88□□□□□ -1.95
YMR050CYMR050C TOF2Q02208 771 aa2.88□□□□□ -1.95
YMR050CYMR050C PEX29Q03370 554 aa2.88□□□□□ -1.95
YMR050CYMR050C VPS72Q03388 795 aa2.88□□□□□ -1.95
YMR050CYMR050C RSF1Q05043 376 aa2.88□□□□□ -1.95
YMR050CYMR050C EFG1Q3E705 233 aaKnown RBP2.88□□□□□ -1.95
YMR050CYMR050C MHP1P43638 1398 aa2.88□□□□□ -1.95
YMR050CYMR050C RPL8BP29453 256 aaKnown RBP2.88□□□□□ -1.95
YMR050CYMR050C KDX1P36005 433 aa2.88□□□□□ -1.95
YMR050CYMR050C PET10P36139 283 aa2.88□□□□□ -1.95
YMR050CYMR050C VPS27P40343 622 aaKnown RBP2.88□□□□□ -1.95
YMR050CYMR050C YGR125WP53273 1036 aa2.88□□□□□ -1.95
YMR050CYMR050C TAP42Q04372 366 aa2.88□□□□□ -1.95
YMR050CYMR050C YDL124WQ07551 312 aaKnown RBP2.88□□□□□ -1.95
YMR050CYMR050C KEL3Q08979 651 aaPredicted RBP2.88□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms