Protein–RNA interactions for Protein: Q06263

VTA1, Vacuolar protein sorting-associated protein VTA1, yeastyeast

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTA1Q06263 YML009W-BYML009W-B 477 nt20.3■□□□□ 0.84
VTA1Q06263 NSR1YGR159C 1245 nt20.21■□□□□ 0.83
VTA1Q06263 NOP1YDL014W 984 nt19.82■□□□□ 0.76
VTA1Q06263 YKL036CYKL036C 393 nt18.25■□□□□ 0.51
VTA1Q06263 MDJ1YFL016C 1536 nt17.86■□□□□ 0.45
VTA1Q06263 Q0297Q0297 156 nt17.32■□□□□ 0.36
VTA1Q06263 SRX1YKL086W 384 nt17.27■□□□□ 0.36
VTA1Q06263 YJL027CYJL027C 417 nt17.03■□□□□ 0.32
VTA1Q06263 SCS3YGL126W 1143 nt16.57■□□□□ 0.24
VTA1Q06263 YCR051WYCR051W 669 nt16.36■□□□□ 0.21
VTA1Q06263 DBP2YNL112W 1641 nt15.79■□□□□ 0.12
VTA1Q06263 YOL085CYOL085C 342 nt15.78■□□□□ 0.12
VTA1Q06263 TRN1tP(UGG)A 72 nt15.6■□□□□ 0.09
VTA1Q06263 SUF9tP(UGG)F 72 nt15.6■□□□□ 0.09
VTA1Q06263 SUF8tP(UGG)H 72 nt15.6■□□□□ 0.09
VTA1Q06263 tP(UGG)LtP(UGG)L 72 nt15.6■□□□□ 0.09
VTA1Q06263 SUF7tP(UGG)M 72 nt15.6■□□□□ 0.09
VTA1Q06263 tP(UGG)N1tP(UGG)N1 72 nt15.6■□□□□ 0.09
VTA1Q06263 tP(UGG)N2tP(UGG)N2 72 nt15.6■□□□□ 0.09
VTA1Q06263 tP(UGG)O1tP(UGG)O1 72 nt15.6■□□□□ 0.09
VTA1Q06263 SUF11tP(UGG)O2 72 nt15.6■□□□□ 0.09
VTA1Q06263 RPP1BYDL130W 321 nt15.53■□□□□ 0.08
VTA1Q06263 PKP1YIL042C 1185 nt15.48■□□□□ 0.07
VTA1Q06263 CCC1YLR220W 969 nt15.4■□□□□ 0.06
VTA1Q06263 YBR190WYBR190W 312 nt15.29■□□□□ 0.04
VTA1Q06263 RVS167YDR388W 1449 nt14.98□□□□□ -0.01
VTA1Q06263 RTC3YHR087W 336 nt14.93□□□□□ -0.02
VTA1Q06263 ATS1YAL020C 1002 nt14.84□□□□□ -0.03
VTA1Q06263 PET122YER153C 765 nt14.79□□□□□ -0.04
VTA1Q06263 SCJ1YMR214W 1134 nt14.78□□□□□ -0.04
VTA1Q06263 tP(UGG)O3tP(UGG)O3 72 nt14.75□□□□□ -0.05
VTA1Q06263 SCR1SCR1 522 nt14.72□□□□□ -0.05
VTA1Q06263 SHR5YOL110W 714 nt14.42□□□□□ -0.1
VTA1Q06263 RRN5YLR141W 1092 nt14.37□□□□□ -0.11
VTA1Q06263 YDJ1YNL064C 1230 nt14.32□□□□□ -0.12
VTA1Q06263 SSA3YBL075C 1950 nt14.32□□□□□ -0.12
VTA1Q06263 YER088W-BYER088W-B 147 nt14.1□□□□□ -0.15
VTA1Q06263 RSB1YOR049C 1065 nt14.1□□□□□ -0.15
VTA1Q06263 URN1YPR152C 1398 nt13.96□□□□□ -0.17
VTA1Q06263 GAR1YHR089C 618 nt13.93□□□□□ -0.18
VTA1Q06263 DEP1YAL013W 1218 nt13.92□□□□□ -0.18
VTA1Q06263 PUT4YOR348C 1884 nt13.85□□□□□ -0.19
VTA1Q06263 RPN10YHR200W 807 nt13.85□□□□□ -0.19
VTA1Q06263 OPI9YLR338W 858 nt13.79□□□□□ -0.2
VTA1Q06263 YNL208WYNL208W 600 nt13.79□□□□□ -0.2
VTA1Q06263 PST2YDR032C 597 nt13.73□□□□□ -0.21
VTA1Q06263 SAH1YER043C 1350 nt13.65□□□□□ -0.22
VTA1Q06263 ARE1YCR048W 1833 nt13.57□□□□□ -0.24
VTA1Q06263 TIR1YER011W 765 nt13.48□□□□□ -0.25
VTA1Q06263 PUN1YLR414C 792 nt13.43□□□□□ -0.26
VTA1Q06263 YHR049C-AYHR049C-A 297 nt13.41□□□□□ -0.26
VTA1Q06263 POA1YBR022W 534 nt13.38□□□□□ -0.27
VTA1Q06263 YJR018WYJR018W 363 nt13.34□□□□□ -0.27
VTA1Q06263 SSA1YAL005C 1929 nt13.29□□□□□ -0.28
VTA1Q06263 YKL097CYKL097C 411 nt13.22□□□□□ -0.29
VTA1Q06263 PTC2YER089C 1395 nt13.2□□□□□ -0.3
VTA1Q06263 BSC6YOL137W 1494 nt13.16□□□□□ -0.3
VTA1Q06263 SHU1YHL006C 453 nt13.14□□□□□ -0.31
VTA1Q06263 RPP2BYDR382W 333 nt13.13□□□□□ -0.31
VTA1Q06263 BUD23YCR047C 828 nt13.1□□□□□ -0.31
VTA1Q06263 YJR120WYJR120W 351 nt13.08□□□□□ -0.32
VTA1Q06263 NAB2YGL122C 1578 nt13.06□□□□□ -0.32
VTA1Q06263 SRB2YHR041C 633 nt12.99□□□□□ -0.33
VTA1Q06263 INM2YDR287W 879 nt12.91□□□□□ -0.34
VTA1Q06263 DAL1YIR027C 1383 nt12.9□□□□□ -0.34
VTA1Q06263 YGR021WYGR021W 873 nt12.88□□□□□ -0.35
VTA1Q06263 YAL037C-BYAL037C-B 975 nt12.88□□□□□ -0.35
VTA1Q06263 WWM1YFL010C 636 nt12.86□□□□□ -0.35
VTA1Q06263 FIS1YIL065C 468 nt12.84□□□□□ -0.35
VTA1Q06263 BDH2YAL061W 1254 nt12.84□□□□□ -0.35
VTA1Q06263 FPR4YLR449W 1179 nt12.83□□□□□ -0.36
VTA1Q06263 SPT5YML010W 3192 nt12.78□□□□□ -0.36
VTA1Q06263 HOM6YJR139C 1080 nt12.78□□□□□ -0.36
VTA1Q06263 PHO4YFR034C 939 nt12.75□□□□□ -0.37
VTA1Q06263 YBL100CYBL100C 315 nt12.75□□□□□ -0.37
VTA1Q06263 YFL021C-AYFL021C-A 855 nt12.73□□□□□ -0.37
VTA1Q06263 LSM3YLR438C-A 270 nt12.7□□□□□ -0.38
VTA1Q06263 MNP1YGL068W 585 nt12.67□□□□□ -0.38
VTA1Q06263 YOR139CYOR139C 393 nt12.63□□□□□ -0.39
VTA1Q06263 RKM5YLR137W 1104 nt12.6□□□□□ -0.39
VTA1Q06263 NPL3YDR432W 1245 nt12.59□□□□□ -0.39
VTA1Q06263 TRM9YML014W 840 nt12.59□□□□□ -0.39
VTA1Q06263 FUN26YAL022C 1554 nt12.59□□□□□ -0.39
VTA1Q06263 YOL037CYOL037C 354 nt12.57□□□□□ -0.4
VTA1Q06263 YPS1YLR120C 1710 nt12.49□□□□□ -0.41
VTA1Q06263 CCT6YDR188W 1641 nt12.48□□□□□ -0.41
VTA1Q06263 ALF1YNL148C 765 nt12.45□□□□□ -0.42
VTA1Q06263 YDR095CYDR095C 411 nt12.44□□□□□ -0.42
VTA1Q06263 SSA4YER103W 1929 nt12.43□□□□□ -0.42
VTA1Q06263 SUF2tP(AGG)C 72 nt12.41□□□□□ -0.42
VTA1Q06263 SUF10tP(AGG)N 72 nt12.41□□□□□ -0.42
VTA1Q06263 MEP2YNL142W 1500 nt12.39□□□□□ -0.43
VTA1Q06263 YHR165W-AYHR165W-A 312 nt12.37□□□□□ -0.43
VTA1Q06263 YLR281CYLR281C 468 nt12.23□□□□□ -0.45
VTA1Q06263 SIS1YNL007C 1059 nt12.23□□□□□ -0.45
VTA1Q06263 Q0182Q0182 405 nt12.22□□□□□ -0.45
VTA1Q06263 RPP2AYOL039W 321 nt12.2□□□□□ -0.46
VTA1Q06263 WHI5YOR083W 888 nt12.18□□□□□ -0.46
VTA1Q06263 DCW1YKL046C 1350 nt12.17□□□□□ -0.46
VTA1Q06263 tM(CAU)CtM(CAU)C 72 nt12.15□□□□□ -0.46
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms