RNA–Protein interactions for RNA: YMR050C

YMR050C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YMR050C, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR050CYMR050C MTC1P47018 478 aaKnown RBP4.39□□□□□ -1.71
YMR050CYMR050C SCT1P32784 759 aa4.02□□□□□ -1.77
YMR050CYMR050C RQC2Q12532 1038 aaKnown RBP3.99□□□□□ -1.77
YMR050CYMR050C RSE1Q04693 1361 aaKnown RBP3.93□□□□□ -1.78
YMR050CYMR050C NAP1P25293 417 aaKnown RBP3.87□□□□□ -1.79
YMR050CYMR050C NSR1P27476 414 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
YMR050CYMR050C INO80P53115 1489 aa3.85□□□□□ -1.79
YMR050CYMR050C YTA7P40340 1379 aa3.8□□□□□ -1.8
YMR050CYMR050C TAF7Q05021 590 aa3.78□□□□□ -1.8
YMR050CYMR050C URN1Q06525 465 aaKnown RBP3.78□□□□□ -1.8
YMR050CYMR050C BFR2Q06631 534 aaKnown RBP3.77□□□□□ -1.81
YMR050CYMR050C RTT106P40161 455 aa3.76□□□□□ -1.81
YMR050CYMR050C SPA2P23201 1466 aaKnown RBP3.76□□□□□ -1.81
YMR050CYMR050C ABP1P15891 592 aaKnown RBP3.75□□□□□ -1.81
YMR050CYMR050C TFA1P36100 482 aa3.74□□□□□ -1.81
YMR050CYMR050C MIF2P35201 549 aa3.74□□□□□ -1.81
YMR050CYMR050C SAS10Q12136 610 aaPredicted RBP3.74□□□□□ -1.81
YMR050CYMR050C DRS1P32892 752 aaKnown RBP3.72□□□□□ -1.81
YMR050CYMR050C PAF1P38351 445 aa3.72□□□□□ -1.81
YMR050CYMR050C LEU3P08638 886 aa3.71□□□□□ -1.82
YMR050CYMR050C ENP1P38333 483 aaKnown RBP3.66□□□□□ -1.82
YMR050CYMR050C YJL181WP46987 611 aa3.66□□□□□ -1.82
YMR050CYMR050C POL5P39985 1022 aaKnown RBP3.63□□□□□ -1.83
YMR050CYMR050C UBP1P25037 809 aa3.63□□□□□ -1.83
YMR050CYMR050C SIS2P36024 562 aa3.59□□□□□ -1.83
YMR050CYMR050C MRX12P47084 519 aa3.59□□□□□ -1.83
YMR050CYMR050C RRT14P40470 206 aa3.59□□□□□ -1.83
YMR050CYMR050C NOP7P53261 605 aaKnown RBP3.55□□□□□ -1.84
YMR050CYMR050C IFH1P39520 1085 aa3.55□□□□□ -1.84
YMR050CYMR050C PRI1P10363 409 aa3.54□□□□□ -1.84
YMR050CYMR050C NAB3P38996 802 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
YMR050CYMR050C CLB5P30283 435 aa3.5□□□□□ -1.85
YMR050CYMR050C PRP40P33203 583 aaKnown RBP3.49□□□□□ -1.85
YMR050CYMR050C SEN54Q02825 467 aaPredicted RBP3.47□□□□□ -1.85
YMR050CYMR050C BNR1P40450 1375 aa3.47□□□□□ -1.85
YMR050CYMR050C PSD2P53037 1138 aaKnown RBP3.46□□□□□ -1.86
YMR050CYMR050C LEO1P38439 464 aa3.45□□□□□ -1.86
YMR050CYMR050C TAF2P23255 1407 aa3.45□□□□□ -1.86
YMR050CYMR050C SUP35P05453 685 aaKnown RBP3.44□□□□□ -1.86
YMR050CYMR050C KOG1P38873 1557 aa3.44□□□□□ -1.86
YMR050CYMR050C SGS1P35187 1447 aa3.44□□□□□ -1.86
YMR050CYMR050C SPT5P27692 1063 aaKnown RBP3.44□□□□□ -1.86
YMR050CYMR050C YMR196WQ04336 1088 aa3.44□□□□□ -1.86
YMR050CYMR050C SKI3P17883 1432 aaKnown RBP3.44□□□□□ -1.86
YMR050CYMR050C STH1P32597 1359 aa3.44□□□□□ -1.86
YMR050CYMR050C YFR006WP43590 535 aa3.44□□□□□ -1.86
YMR050CYMR050C TCB3Q03640 1545 aaKnown RBP3.44□□□□□ -1.86
YMR050CYMR050C DRS2P39524 1355 aa3.43□□□□□ -1.86
YMR050CYMR050C TAF5P38129 798 aa3.43□□□□□ -1.86
YMR050CYMR050C ENP2P48234 707 aaKnown RBP3.43□□□□□ -1.86
YMR050CYMR050C LAM6Q08001 693 aa3.43□□□□□ -1.86
YMR050CYMR050C TIF4632P39936 914 aaKnown RBP3.43□□□□□ -1.86
YMR050CYMR050C CKB1P43639 278 aa3.43□□□□□ -1.86
YMR050CYMR050C YPR148CQ06523 435 aa3.42□□□□□ -1.86
YMR050CYMR050C BUD4P47136 1447 aa3.42□□□□□ -1.86
YMR050CYMR050C BUD21Q08492 214 aaPredicted RBP3.42□□□□□ -1.86
YMR050CYMR050C UGA2P38067 497 aa3.41□□□□□ -1.86
YMR050CYMR050C RTF1P53064 558 aa3.41□□□□□ -1.86
YMR050CYMR050C HUL5P53119 910 aa3.41□□□□□ -1.86
YMR050CYMR050C SWR1Q05471 1514 aa3.41□□□□□ -1.86
YMR050CYMR050C AVT3P36062 692 aa3.4□□□□□ -1.86
YMR050CYMR050C FPR3P38911 411 aaKnown RBP3.4□□□□□ -1.87
YMR050CYMR050C SAP155P43612 1002 aa3.39□□□□□ -1.87
YMR050CYMR050C NOP8Q08287 484 aaPredicted RBP3.39□□□□□ -1.87
YMR050CYMR050C CSE1P33307 960 aa3.38□□□□□ -1.87
YMR050CYMR050C SPT7P35177 1332 aa3.37□□□□□ -1.87
YMR050CYMR050C MEC3Q02574 474 aa3.37□□□□□ -1.87
YMR050CYMR050C TRM732Q03496 1420 aa3.37□□□□□ -1.87
YMR050CYMR050C SMC4Q12267 1418 aa3.37□□□□□ -1.87
YMR050CYMR050C SVF1Q05515 481 aa3.36□□□□□ -1.87
YMR050CYMR050C MET10P39692 1035 aa3.36□□□□□ -1.87
YMR050CYMR050C ALD3P54114 506 aa3.36□□□□□ -1.87
YMR050CYMR050C HPC2Q01448 625 aa3.36□□□□□ -1.87
YMR050CYMR050C FUN12P39730 1002 aaKnown RBP3.35□□□□□ -1.87
YMR050CYMR050C AIM7Q12156 149 aa3.35□□□□□ -1.87
YMR050CYMR050C FPR4Q06205 392 aaPredicted RBP3.35□□□□□ -1.87
YMR050CYMR050C RPS9BP05755 195 aaKnown RBP3.35□□□□□ -1.87
YMR050CYMR050C TPM1P17536 199 aaKnown RBP3.35□□□□□ -1.87
YMR050CYMR050C ALD2P47771 506 aa3.34□□□□□ -1.87
YMR050CYMR050C GEA2P39993 1459 aaKnown RBP3.33□□□□□ -1.88
YMR050CYMR050C RPP2BP02400 110 aaKnown RBP3.33□□□□□ -1.88
YMR050CYMR050C YAF9P53930 226 aa3.32□□□□□ -1.88
YMR050CYMR050C KEX1P09620 729 aa3.32□□□□□ -1.88
YMR050CYMR050C SPT6P23615 1451 aaKnown RBP3.31□□□□□ -1.88
YMR050CYMR050C SEC20P28791 383 aa3.31□□□□□ -1.88
YMR050CYMR050C IRC3Q06683 689 aa3.31□□□□□ -1.88
YMR050CYMR050C MMS1Q06211 1407 aa3.31□□□□□ -1.88
YMR050CYMR050C CHZ1P40019 153 aaPredicted RBP3.3□□□□□ -1.88
YMR050CYMR050C YFR016CP43597 1233 aaKnown RBP3.3□□□□□ -1.88
YMR050CYMR050C COG8Q04632 607 aa3.3□□□□□ -1.88
YMR050CYMR050C DAL5P15365 543 aa3.3□□□□□ -1.88
YMR050CYMR050C MDG1P53885 366 aa3.3□□□□□ -1.88
YMR050CYMR050C YEF3P16521 1044 aaKnown RBP3.29□□□□□ -1.88
YMR050CYMR050C PAP2P53632 584 aaKnown RBP3.29□□□□□ -1.88
YMR050CYMR050C ATG13Q06628 738 aa3.29□□□□□ -1.88
YMR050CYMR050C BRE1Q07457 700 aaKnown RBP3.29□□□□□ -1.88
YMR050CYMR050C RSC30P38781 883 aa3.29□□□□□ -1.88
YMR050CYMR050C ZDS2P54786 942 aa3.28□□□□□ -1.88
YMR050CYMR050C LTE1P07866 1435 aa3.28□□□□□ -1.88
YMR050CYMR050C ENV9Q08651 330 aa3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms