RNA–Protein interactions for RNA: YKL185W

ASH1, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene ASH1, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cellular bud, Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASH1YKL185W NYV1Q12255 253 aa6.18□□□□□ -1.42
ASH1YKL185W HSP82P02829 709 aaKnown RBP6.18□□□□□ -1.42
ASH1YKL185W ECM32P32644 1121 aaKnown RBP6.18□□□□□ -1.42
ASH1YKL185W SKI2P35207 1287 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
ASH1YKL185W YLR407WQ06070 228 aa6.18□□□□□ -1.42
ASH1YKL185W SFH1Q06168 426 aa6.18□□□□□ -1.42
ASH1YKL185W HAT1Q12341 374 aa6.18□□□□□ -1.42
ASH1YKL185W HXK1P04806 485 aaKnown RBP6.17□□□□□ -1.42
ASH1YKL185W PHO13P19881 312 aa6.17□□□□□ -1.42
ASH1YKL185W HAL5P38970 855 aaKnown RBP6.17□□□□□ -1.42
ASH1YKL185W MAL13P53338 473 aa6.17□□□□□ -1.42
ASH1YKL185W DOS2P54858 310 aa6.17□□□□□ -1.42
ASH1YKL185W AIM7Q12156 149 aa6.17□□□□□ -1.42
ASH1YKL185W PUS1Q12211 544 aaKnown RBP6.17□□□□□ -1.42
ASH1YKL185W RUD3Q12234 484 aaKnown RBP6.17□□□□□ -1.42
ASH1YKL185W PIF1P07271 859 aa6.16□□□□□ -1.42
ASH1YKL185W MET1P36150 593 aa6.16□□□□□ -1.42
ASH1YKL185W SPT8P38915 602 aa6.16□□□□□ -1.42
ASH1YKL185W KAR5Q04746 504 aa6.16□□□□□ -1.42
ASH1YKL185W VPS38Q05919 439 aa6.16□□□□□ -1.42
ASH1YKL185W SSF2Q12153 453 aaPredicted RBP6.16□□□□□ -1.42
ASH1YKL185W TAH18Q12181 623 aa6.16□□□□□ -1.42
ASH1YKL185W PMD1P32634 1753 aa6.16□□□□□ -1.42
ASH1YKL185W PGI1P12709 554 aaKnown RBP6.16□□□□□ -1.42
ASH1YKL185W RAM1P22007 431 aa6.16□□□□□ -1.42
ASH1YKL185W SAC6P32599 642 aaKnown RBP6.16□□□□□ -1.42
ASH1YKL185W PRP40P33203 583 aaKnown RBP6.16□□□□□ -1.42
ASH1YKL185W BYE1P36106 594 aa6.16□□□□□ -1.42
ASH1YKL185W GLO3P38682 493 aaKnown RBP6.16□□□□□ -1.42
ASH1YKL185W HUL4P40985 892 aa6.16□□□□□ -1.42
ASH1YKL185W ENP2P48234 707 aaKnown RBP6.16□□□□□ -1.42
ASH1YKL185W ALF1P53904 254 aa6.16□□□□□ -1.42
ASH1YKL185W HCR1Q05775 265 aaKnown RBP6.16□□□□□ -1.42
ASH1YKL185W SDH5Q08230 162 aa6.16□□□□□ -1.42
ASH1YKL185W AFT2Q08957 416 aa6.16□□□□□ -1.42
ASH1YKL185W YOR223WQ12015 292 aa6.16□□□□□ -1.42
ASH1YKL185W FIG2P25653 1609 aa6.15□□□□□ -1.42
ASH1YKL185W RAD1P06777 1100 aa6.15□□□□□ -1.43
ASH1YKL185W KIN1P13185 1064 aa6.15□□□□□ -1.43
ASH1YKL185W SRP54P20424 541 aaKnown RBP6.15□□□□□ -1.43
ASH1YKL185W SEC65P29478 273 aa6.15□□□□□ -1.43
ASH1YKL185W YEL043WP32618 956 aa6.15□□□□□ -1.43
ASH1YKL185W NGR1P32831 672 aaKnown RBP6.15□□□□□ -1.43
ASH1YKL185W DEF1P35732 738 aaKnown RBP6.15□□□□□ -1.43
ASH1YKL185W MUD2P36084 527 aaKnown RBP6.15□□□□□ -1.43
ASH1YKL185W ALD3P54114 506 aa6.15□□□□□ -1.43
ASH1YKL185W ATG9Q12142 997 aa6.15□□□□□ -1.43
ASH1YKL185W OSH2Q12451 1283 aa6.15□□□□□ -1.43
ASH1YKL185W YPR015CQ12531 247 aa6.15□□□□□ -1.43
ASH1YKL185W HCA4P20448 770 aaKnown RBP6.14□□□□□ -1.43
ASH1YKL185W NUD1P32336 851 aa6.14□□□□□ -1.43
ASH1YKL185W SWI3P32591 825 aa6.14□□□□□ -1.43
ASH1YKL185W ADE17P38009 592 aaKnown RBP6.14□□□□□ -1.43
ASH1YKL185W CRG1P38892 291 aaRIP-Chip data6.14□□□□□ -1.43not detected
ASH1YKL185W MIC19P43594 170 aa6.14□□□□□ -1.43
ASH1YKL185W IRC8P47046 822 aa6.14□□□□□ -1.43
ASH1YKL185W HOT1Q03213 719 aa6.14□□□□□ -1.43
ASH1YKL185W GFD1Q04839 188 aaKnown RBP6.14□□□□□ -1.43
ASH1YKL185W EST2Q06163 884 aa6.14□□□□□ -1.43
ASH1YKL185W SPN1Q06505 410 aaPredicted RBP6.14□□□□□ -1.43
ASH1YKL185W PPM2Q08282 695 aa6.14□□□□□ -1.43
ASH1YKL185W PFK2P16862 959 aaKnown RBP RIP-Chip data6.13□□□□□ -1.43not detected
ASH1YKL185W RER2P35196 286 aa6.13□□□□□ -1.43
ASH1YKL185W SAP190P36123 1033 aa6.13□□□□□ -1.43
ASH1YKL185W RPN11P43588 306 aaKnown RBP6.13□□□□□ -1.43
ASH1YKL185W BOP3P53958 396 aa6.13□□□□□ -1.43
ASH1YKL185W VPS72Q03388 795 aa6.13□□□□□ -1.43
ASH1YKL185W YML082WQ04533 649 aaKnown RBP6.13□□□□□ -1.43
ASH1YKL185W YDR338CQ05497 695 aa6.13□□□□□ -1.43
ASH1YKL185W THI3Q07471 609 aa6.13□□□□□ -1.43
ASH1YKL185W HKR1P41809 1802 aa6.13□□□□□ -1.43
ASH1YKL185W DAL7P21826 554 aa6.13□□□□□ -1.43
ASH1YKL185W CDC60P26637 1090 aaKnown RBP6.13□□□□□ -1.43
ASH1YKL185W PXL1P36166 706 aa6.13□□□□□ -1.43
ASH1YKL185W CCC2P38995 1004 aa6.13□□□□□ -1.43
ASH1YKL185W YIR042CP40586 236 aa6.13□□□□□ -1.43
ASH1YKL185W VAC14Q06708 880 aa6.13□□□□□ -1.43
ASH1YKL185W SEC39Q12745 709 aa6.13□□□□□ -1.43
ASH1YKL185W CBP3P21560 335 aa6.12□□□□□ -1.43
ASH1YKL185W RAD53P22216 821 aa6.12□□□□□ -1.43
ASH1YKL185W SHM1P37292 490 aaPredicted RBP6.12□□□□□ -1.43
ASH1YKL185W GRX7P38068 203 aa6.12□□□□□ -1.43
ASH1YKL185W SMF1P38925 575 aa6.12□□□□□ -1.43
ASH1YKL185W RRP8P38961 392 aaKnown RBP6.12□□□□□ -1.43
ASH1YKL185W AKR1P39010 764 aa6.12□□□□□ -1.43
ASH1YKL185W ATG3P40344 310 aa6.12□□□□□ -1.43
ASH1YKL185W YJL181WP46987 611 aa6.12□□□□□ -1.43
ASH1YKL185W YJR079WP47126 109 aa6.12□□□□□ -1.43
ASH1YKL185W NIS1P53939 407 aa6.12□□□□□ -1.43
ASH1YKL185W RAT1Q02792 1006 aaKnown RBP6.12□□□□□ -1.43
ASH1YKL185W JIP3O13555 125 aa6.11□□□□□ -1.43
ASH1YKL185W SEC23P15303 768 aaKnown RBP6.11□□□□□ -1.43
ASH1YKL185W COQ1P18900 473 aa6.11□□□□□ -1.43
ASH1YKL185W PRE10P21242 288 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
ASH1YKL185W URA1P28272 314 aaPredicted RBP6.11□□□□□ -1.43
ASH1YKL185W MGM1P32266 881 aa6.11□□□□□ -1.43
ASH1YKL185W VRP1P37370 817 aa6.11□□□□□ -1.43
ASH1YKL185W RPN10P38886 268 aaKnown RBP6.11□□□□□ -1.43
ASH1YKL185W BUD16P39988 312 aa6.11□□□□□ -1.43
ASH1YKL185W ISM1P48526 1002 aa6.11□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 79.4 ms