Protein–RNA interactions for Protein: Q06168

SFH1, Chromatin structure-remodeling complex subunit SFH1, yeastyeast

Predictions only

Length 426 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SFH1Q06168 NSR1YGR159C 1245 nt20.74■□□□□ 0.91
SFH1Q06168 YML009W-BYML009W-B 477 nt20.37■□□□□ 0.85
SFH1Q06168 NOP1YDL014W 984 nt19.44■□□□□ 0.7
SFH1Q06168 MDJ1YFL016C 1536 nt19.11■□□□□ 0.65
SFH1Q06168 YJL027CYJL027C 417 nt17.46■□□□□ 0.39
SFH1Q06168 YKL036CYKL036C 393 nt17.44■□□□□ 0.38
SFH1Q06168 SRX1YKL086W 384 nt17.07■□□□□ 0.32
SFH1Q06168 Q0297Q0297 156 nt16.92■□□□□ 0.3
SFH1Q06168 DBP2YNL112W 1641 nt16.72■□□□□ 0.27
SFH1Q06168 YBR190WYBR190W 312 nt16.36■□□□□ 0.21
SFH1Q06168 YCR051WYCR051W 669 nt16.15■□□□□ 0.18
SFH1Q06168 RTC3YHR087W 336 nt15.95■□□□□ 0.14
SFH1Q06168 SSA3YBL075C 1950 nt15.95■□□□□ 0.14
SFH1Q06168 TRN1tP(UGG)A 72 nt15.84■□□□□ 0.13
SFH1Q06168 SUF9tP(UGG)F 72 nt15.84■□□□□ 0.13
SFH1Q06168 SUF8tP(UGG)H 72 nt15.84■□□□□ 0.13
SFH1Q06168 tP(UGG)LtP(UGG)L 72 nt15.84■□□□□ 0.13
SFH1Q06168 SUF7tP(UGG)M 72 nt15.84■□□□□ 0.13
SFH1Q06168 tP(UGG)N1tP(UGG)N1 72 nt15.84■□□□□ 0.13
SFH1Q06168 tP(UGG)N2tP(UGG)N2 72 nt15.84■□□□□ 0.13
SFH1Q06168 tP(UGG)O1tP(UGG)O1 72 nt15.84■□□□□ 0.13
SFH1Q06168 SUF11tP(UGG)O2 72 nt15.84■□□□□ 0.13
SFH1Q06168 CCC1YLR220W 969 nt15.68■□□□□ 0.1
SFH1Q06168 SCS3YGL126W 1143 nt15.63■□□□□ 0.09
SFH1Q06168 PUT4YOR348C 1884 nt15.44■□□□□ 0.06
SFH1Q06168 SCJ1YMR214W 1134 nt15.36■□□□□ 0.05
SFH1Q06168 RVS167YDR388W 1449 nt15.34■□□□□ 0.05
SFH1Q06168 YOL085CYOL085C 342 nt15.2■□□□□ 0.02
SFH1Q06168 RPP1BYDL130W 321 nt15.18■□□□□ 0.02
SFH1Q06168 PKP1YIL042C 1185 nt15.09■□□□□ 0.01
SFH1Q06168 ARE1YCR048W 1833 nt14.97□□□□□ -0.01
SFH1Q06168 POA1YBR022W 534 nt14.88□□□□□ -0.03
SFH1Q06168 tP(UGG)O3tP(UGG)O3 72 nt14.79□□□□□ -0.04
SFH1Q06168 SAH1YER043C 1350 nt14.78□□□□□ -0.04
SFH1Q06168 URN1YPR152C 1398 nt14.75□□□□□ -0.05
SFH1Q06168 SHR5YOL110W 714 nt14.75□□□□□ -0.05
SFH1Q06168 YHR049C-AYHR049C-A 297 nt14.72□□□□□ -0.05
SFH1Q06168 BSC6YOL137W 1494 nt14.67□□□□□ -0.06
SFH1Q06168 OPI9YLR338W 858 nt14.65□□□□□ -0.06
SFH1Q06168 PET122YER153C 765 nt14.64□□□□□ -0.07
SFH1Q06168 DEP1YAL013W 1218 nt14.62□□□□□ -0.07
SFH1Q06168 SPT5YML010W 3192 nt14.58□□□□□ -0.08
SFH1Q06168 BUD23YCR047C 828 nt14.31□□□□□ -0.12
SFH1Q06168 SSA4YER103W 1929 nt14.27□□□□□ -0.13
SFH1Q06168 YDJ1YNL064C 1230 nt14.26□□□□□ -0.13
SFH1Q06168 RPN10YHR200W 807 nt14.24□□□□□ -0.13
SFH1Q06168 YNL208WYNL208W 600 nt14.22□□□□□ -0.13
SFH1Q06168 PTC2YER089C 1395 nt14.17□□□□□ -0.14
SFH1Q06168 RRN5YLR141W 1092 nt14.15□□□□□ -0.14
SFH1Q06168 PUN1YLR414C 792 nt14.15□□□□□ -0.14
SFH1Q06168 SCR1SCR1 522 nt14.15□□□□□ -0.14
SFH1Q06168 GAR1YHR089C 618 nt14.09□□□□□ -0.15
SFH1Q06168 NAB2YGL122C 1578 nt14.02□□□□□ -0.16
SFH1Q06168 YJR018WYJR018W 363 nt14.01□□□□□ -0.17
SFH1Q06168 YER088W-BYER088W-B 147 nt13.87□□□□□ -0.19
SFH1Q06168 FIS1YIL065C 468 nt13.85□□□□□ -0.19
SFH1Q06168 YJR120WYJR120W 351 nt13.84□□□□□ -0.19
SFH1Q06168 BDF1YLR399C 2061 nt13.83□□□□□ -0.2
SFH1Q06168 MEP2YNL142W 1500 nt13.83□□□□□ -0.2
SFH1Q06168 ATS1YAL020C 1002 nt13.8□□□□□ -0.2
SFH1Q06168 DAL1YIR027C 1383 nt13.73□□□□□ -0.21
SFH1Q06168 FPR4YLR449W 1179 nt13.69□□□□□ -0.22
SFH1Q06168 DCW1YKL046C 1350 nt13.68□□□□□ -0.22
SFH1Q06168 SSA1YAL005C 1929 nt13.67□□□□□ -0.22
SFH1Q06168 PHO4YFR034C 939 nt13.64□□□□□ -0.23
SFH1Q06168 TIR1YER011W 765 nt13.63□□□□□ -0.23
SFH1Q06168 RSB1YOR049C 1065 nt13.61□□□□□ -0.23
SFH1Q06168 YPS1YLR120C 1710 nt13.6□□□□□ -0.23
SFH1Q06168 TAT1YBR069C 1860 nt13.59□□□□□ -0.23
SFH1Q06168 INM2YDR287W 879 nt13.54□□□□□ -0.24
SFH1Q06168 SRB2YHR041C 633 nt13.47□□□□□ -0.25
SFH1Q06168 RPP2BYDR382W 333 nt13.46□□□□□ -0.25
SFH1Q06168 YHR165W-AYHR165W-A 312 nt13.44□□□□□ -0.26
SFH1Q06168 YDR095CYDR095C 411 nt13.41□□□□□ -0.26
SFH1Q06168 YBR220CYBR220C 1683 nt13.4□□□□□ -0.26
SFH1Q06168 EMI2YDR516C 1503 nt13.39□□□□□ -0.27
SFH1Q06168 YBL100CYBL100C 315 nt13.35□□□□□ -0.27
SFH1Q06168 CAC2YML102W 1407 nt13.3□□□□□ -0.28
SFH1Q06168 PTP1YDL230W 1008 nt13.28□□□□□ -0.28
SFH1Q06168 YDL221WYDL221W 552 nt13.25□□□□□ -0.29
SFH1Q06168 SDH1YKL148C 1923 nt13.21□□□□□ -0.3
SFH1Q06168 YMR090WYMR090W 684 nt13.2□□□□□ -0.3
SFH1Q06168 FUN26YAL022C 1554 nt13.2□□□□□ -0.3
SFH1Q06168 BDH2YAL061W 1254 nt13.17□□□□□ -0.3
SFH1Q06168 RPP2AYOL039W 321 nt13.13□□□□□ -0.31
SFH1Q06168 IRC15YPL017C 1500 nt13.08□□□□□ -0.31
SFH1Q06168 PAC11YDR488C 1602 nt13.06□□□□□ -0.32
SFH1Q06168 ALF1YNL148C 765 nt13.04□□□□□ -0.32
SFH1Q06168 SCC4YER147C 1875 nt13.02□□□□□ -0.32
SFH1Q06168 TRM9YML014W 840 nt13□□□□□ -0.33
SFH1Q06168 PCH2YBR186W 1695 nt12.99□□□□□ -0.33
SFH1Q06168 GIS3YLR094C 1509 nt12.99□□□□□ -0.33
SFH1Q06168 WWM1YFL010C 636 nt12.99□□□□□ -0.33
SFH1Q06168 GUT2YIL155C 1950 nt12.98□□□□□ -0.33
SFH1Q06168 SIS1YNL007C 1059 nt12.97□□□□□ -0.33
SFH1Q06168 CCT6YDR188W 1641 nt12.95□□□□□ -0.34
SFH1Q06168 PST2YDR032C 597 nt12.92□□□□□ -0.34
SFH1Q06168 GFD2YCL036W 1701 nt12.88□□□□□ -0.35
SFH1Q06168 ART5YGR068C 1761 nt12.87□□□□□ -0.35
SFH1Q06168 PIB2YGL023C 1908 nt12.87□□□□□ -0.35
Retrieved 100 of 7,029 protein–RNA pairs in 10.4 ms