RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	FKS1	P38631	1876 aa	Known RBP	6.66	□□□□□ -1.34
RSC30	YHR056C	RPS9A	O13516	197 aa	Known RBP	6.66	□□□□□ -1.34
RSC30	YHR056C	REG2	P38232	338 aa		6.66	□□□□□ -1.34
RSC30	YHR056C	VPS8	P39702	1274 aa		6.66	□□□□□ -1.34
RSC30	YHR056C	MMF1	P40185	145 aa	Known RBP	6.66	□□□□□ -1.34
RSC30	YHR056C	YNG2	P38806	282 aa	Known RBP	6.65	□□□□□ -1.34
RSC30	YHR056C	DUS3	Q06053	668 aa	Known RBP	6.65	□□□□□ -1.34
RSC30	YHR056C	MRD1	Q06106	887 aa	Known RBP	6.65	□□□□□ -1.34
RSC30	YHR056C	SLN1	P39928	1220 aa	Predicted RBP	6.65	□□□□□ -1.35
RSC30	YHR056C	BUD16	P39988	312 aa		6.65	□□□□□ -1.35
RSC30	YHR056C	YNL115C	P53925	644 aa		6.65	□□□□□ -1.35
RSC30	YHR056C	CUS1	Q02554	436 aa	Predicted RBP	6.65	□□□□□ -1.35
RSC30	YHR056C	RAD2	P07276	1031 aa		6.64	□□□□□ -1.35
RSC30	YHR056C	MAS2	P11914	482 aa		6.64	□□□□□ -1.35
RSC30	YHR056C	SAM2	P19358	384 aa	Known RBP	6.64	□□□□□ -1.35
RSC30	YHR056C	SCS3	P53012	380 aa		6.64	□□□□□ -1.35
RSC30	YHR056C	LSB1	P53281	241 aa		6.64	□□□□□ -1.35
RSC30	YHR056C	FOL1	P53848	824 aa		6.64	□□□□□ -1.35
RSC30	YHR056C	CDC45	Q08032	650 aa		6.64	□□□□□ -1.35
RSC30	YHR056C	YHL050C	P38721	697 aa		6.64	□□□□□ -1.35
RSC30	YHR056C	HMF1	P40037	129 aa	Known RBP	6.64	□□□□□ -1.35
RSC30	YHR056C	BBC1	P47068	1157 aa		6.64	□□□□□ -1.35
RSC30	YHR056C	INP52	P50942	1183 aa		6.64	□□□□□ -1.35
RSC30	YHR056C	YGL039W	P53183	348 aa	Known RBP	6.64	□□□□□ -1.35
RSC30	YHR056C	EMI2	Q04409	500 aa	Known RBP	6.64	□□□□□ -1.35
RSC30	YHR056C	LIF1	P53150	421 aa		6.63	□□□□□ -1.35
RSC30	YHR056C	ATG11	Q12527	1178 aa		6.63	□□□□□ -1.35
RSC30	YHR056C	OPI1	P21957	404 aa		6.63	□□□□□ -1.35
RSC30	YHR056C	EPS1	P40557	701 aa		6.63	□□□□□ -1.35
RSC30	YHR056C	PTA1	Q01329	785 aa	Predicted RBP	6.63	□□□□□ -1.35
RSC30	YHR056C	PBY1	P38254	753 aa		6.63	□□□□□ -1.35
RSC30	YHR056C	SAF1	P38352	637 aa		6.63	□□□□□ -1.35
RSC30	YHR056C	RRP8	P38961	392 aa	Known RBP	6.63	□□□□□ -1.35
RSC30	YHR056C	TVP23	P38962	199 aa		6.63	□□□□□ -1.35
RSC30	YHR056C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	6.63	□□□□□ -1.35	not detected
RSC30	YHR056C	FLR1	P38124	548 aa		6.62	□□□□□ -1.35
RSC30	YHR056C	OPT1	P40897	799 aa		6.62	□□□□□ -1.35
RSC30	YHR056C	YLL058W	Q12198	575 aa		6.62	□□□□□ -1.35
RSC30	YHR056C	RIF1	P29539	1916 aa		6.62	□□□□□ -1.35
RSC30	YHR056C	NUC1	P08466	329 aa		6.62	□□□□□ -1.35
RSC30	YHR056C	CAD1	P24813	409 aa	Known RBP	6.62	□□□□□ -1.35
RSC30	YHR056C	KTR3	P38130	404 aa	Predicted RBP	6.62	□□□□□ -1.35
RSC30	YHR056C	HXT5	P38695	592 aa		6.62	□□□□□ -1.35
RSC30	YHR056C	POL32	P47110	350 aa		6.62	□□□□□ -1.35
RSC30	YHR056C	SHP1	P34223	423 aa		6.61	□□□□□ -1.35
RSC30	YHR056C	RPS15	Q01855	142 aa	Known RBP	6.61	□□□□□ -1.35
RSC30	YHR056C	MDR1	P53258	950 aa		6.61	□□□□□ -1.35
RSC30	YHR056C	PIG1	Q06216	648 aa		6.61	□□□□□ -1.35
RSC30	YHR056C	IRC10	Q08118	586 aa		6.61	□□□□□ -1.35
RSC30	YHR056C	MBR1	P23493	339 aa		6.6	□□□□□ -1.35
RSC30	YHR056C	IMG2	P25642	146 aa	Predicted RBP	6.6	□□□□□ -1.35
RSC30	YHR056C	APN2	P38207	520 aa		6.6	□□□□□ -1.35
RSC30	YHR056C	SLX1	P38324	304 aa		6.6	□□□□□ -1.35
RSC30	YHR056C	MET1	P36150	593 aa		6.6	□□□□□ -1.35
RSC30	YHR056C	CIT3	P43635	486 aa		6.6	□□□□□ -1.35
RSC30	YHR056C	VPS30	Q02948	557 aa		6.6	□□□□□ -1.35
RSC30	YHR056C	PKH3	Q03306	898 aa	Predicted RBP	6.6	□□□□□ -1.35
RSC30	YHR056C	PDR18	P53756	1333 aa		6.6	□□□□□ -1.35
RSC30	YHR056C	NOT3	P06102	836 aa	Known RBP	6.59	□□□□□ -1.35
RSC30	YHR056C	COQ1	P18900	473 aa		6.59	□□□□□ -1.35
RSC30	YHR056C	MRPL7	P36519	292 aa		6.59	□□□□□ -1.35
RSC30	YHR056C	LCD1	Q04377	747 aa		6.59	□□□□□ -1.35
RSC30	YHR056C	COQ8	P27697	501 aa		6.59	□□□□□ -1.35
RSC30	YHR056C	MSS51	P32335	436 aa		6.59	□□□□□ -1.35
RSC30	YHR056C	UGA4	P32837	571 aa		6.59	□□□□□ -1.35
RSC30	YHR056C	ALO1	P54783	526 aa	Known RBP	6.59	□□□□□ -1.35
RSC30	YHR056C	HCR1	Q05775	265 aa	Known RBP	6.59	□□□□□ -1.35
RSC30	YHR056C	YLR455W	Q06188	304 aa		6.59	□□□□□ -1.35
RSC30	YHR056C	SSF2	Q12153	453 aa	Predicted RBP	6.59	□□□□□ -1.35
RSC30	YHR056C	ECM21	P38167	1117 aa	Known RBP	6.58	□□□□□ -1.36
RSC30	YHR056C	DSF2	P38213	736 aa		6.58	□□□□□ -1.36
RSC30	YHR056C	TPM2	P40414	161 aa		6.58	□□□□□ -1.36
RSC30	YHR056C	YIL092W	P40497	633 aa		6.58	□□□□□ -1.36
RSC30	YHR056C	HUL5	P53119	910 aa		6.58	□□□□□ -1.36
RSC30	YHR056C	SPO1	P53541	631 aa		6.58	□□□□□ -1.36
RSC30	YHR056C	UTP4	Q06679	776 aa	Known RBP	6.58	□□□□□ -1.36
RSC30	YHR056C	ISW2	Q08773	1120 aa		6.58	□□□□□ -1.36
RSC30	YHR056C	MYO3	P36006	1272 aa		6.58	□□□□□ -1.36
RSC30	YHR056C	YDR344C	Q05510	147 aa		6.58	□□□□□ -1.36
RSC30	YHR056C	MAG2	Q06436	670 aa	Known RBP	6.58	□□□□□ -1.36
RSC30	YHR056C	VIP1	Q06685	1146 aa	Known RBP	6.58	□□□□□ -1.36
RSC30	YHR056C	KIN82	P25341	720 aa		6.57	□□□□□ -1.36
RSC30	YHR056C	TVP38	P36164	337 aa		6.57	□□□□□ -1.36
RSC30	YHR056C	RPL8B	P29453	256 aa	Known RBP	6.57	□□□□□ -1.36
RSC30	YHR056C	SUV3	P32580	737 aa		6.57	□□□□□ -1.36
RSC30	YHR056C	YMR147W	P40218	223 aa	Known RBP	6.57	□□□□□ -1.36
RSC30	YHR056C	RPT6	Q01939	405 aa	Known RBP	6.56	□□□□□ -1.36
RSC30	YHR056C	BRE1	Q07457	700 aa	Known RBP	6.56	□□□□□ -1.36
RSC30	YHR056C	UBC1	P21734	215 aa	Known RBP	6.56	□□□□□ -1.36
RSC30	YHR056C	PPZ1	P26570	692 aa		6.56	□□□□□ -1.36
RSC30	YHR056C	YEL025C	P39991	1188 aa		6.56	□□□□□ -1.36
RSC30	YHR056C	ALG2	P43636	503 aa		6.56	□□□□□ -1.36
RSC30	YHR056C	YLR326W	Q06170	240 aa	Known RBP	6.56	□□□□□ -1.36
RSC30	YHR056C	RPL40A	P0CH08	128 aa	Known RBP	6.55	□□□□□ -1.36
RSC30	YHR056C	RPL40B	P0CH09	128 aa	Known RBP	6.55	□□□□□ -1.36
RSC30	YHR056C	KEX2	P13134	814 aa		6.55	□□□□□ -1.36
RSC30	YHR056C	YAP1801	P38856	637 aa		6.55	□□□□□ -1.36
RSC30	YHR056C	BFA1	P47113	574 aa		6.55	□□□□□ -1.36
RSC30	YHR056C	RPS7B	P48164	190 aa	Known RBP	6.55	□□□□□ -1.36
RSC30	YHR056C	FMS1	P50264	508 aa		6.55	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 45.4 ms