RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	MON2	P48563	1636 aa	Predicted RBP	12.97	□□□□□ -0.33
RSC30	YHR056C	INO80	P53115	1489 aa		12.84	□□□□□ -0.35
RSC30	YHR056C	DNA2	P38859	1522 aa		12.23	□□□□□ -0.45
RSC30	YHR056C	SWR1	Q05471	1514 aa		12.17	□□□□□ -0.46
RSC30	YHR056C	KOG1	P38873	1557 aa		12.15	□□□□□ -0.46
RSC30	YHR056C	TCB3	Q03640	1545 aa	Known RBP	12.04	□□□□□ -0.48
RSC30	YHR056C	TY1B-DR4	Q07793	1604 aa		11.98	□□□□□ -0.49
RSC30	YHR056C	RSE1	Q04693	1361 aa	Known RBP	11.91	□□□□□ -0.5
RSC30	YHR056C	SGS1	P35187	1447 aa		11.49	□□□□□ -0.57
RSC30	YHR056C	HSL1	P34244	1518 aa		11.43	□□□□□ -0.58
RSC30	YHR056C	SPT6	P23615	1451 aa	Known RBP	11.43	□□□□□ -0.58
RSC30	YHR056C	SPA2	P23201	1466 aa	Known RBP	11.42	□□□□□ -0.58
RSC30	YHR056C	THO2	P53552	1597 aa	Known RBP	11.32	□□□□□ -0.6
RSC30	YHR056C	ECM5	Q03214	1411 aa		11.25	□□□□□ -0.61
RSC30	YHR056C	BUD4	P47136	1447 aa		11.22	□□□□□ -0.61
RSC30	YHR056C	HIR3	P47171	1648 aa		11.16	□□□□□ -0.62
RSC30	YHR056C	MDS3	P53094	1487 aa		11.13	□□□□□ -0.63
RSC30	YHR056C	MTC1	P47018	478 aa	Known RBP	11.09	□□□□□ -0.63
RSC30	YHR056C	REV3	P14284	1504 aa		11.05	□□□□□ -0.64
RSC30	YHR056C	PEP1	P32319	1579 aa		10.99	□□□□□ -0.65
RSC30	YHR056C	BPT1	P14772	1559 aa		10.88	□□□□□ -0.67
RSC30	YHR056C	XRN1	P22147	1528 aa	Known RBP	10.85	□□□□□ -0.67
RSC30	YHR056C	ATG2	P53855	1592 aa		10.84	□□□□□ -0.67
RSC30	YHR056C	SSK2	P53599	1579 aa		10.77	□□□□□ -0.68
RSC30	YHR056C	YCF1	P39109	1515 aa	Known RBP	10.7	□□□□□ -0.7
RSC30	YHR056C	SIN3	P22579	1536 aa		10.66	□□□□□ -0.7
RSC30	YHR056C	MIF2	P35201	549 aa		10.63	□□□□□ -0.71
RSC30	YHR056C	SKI3	P17883	1432 aa	Known RBP	10.52	□□□□□ -0.73
RSC30	YHR056C	MET5	P47169	1442 aa		10.52	□□□□□ -0.73
RSC30	YHR056C	MYO2	P19524	1574 aa	Known RBP	10.49	□□□□□ -0.73
RSC30	YHR056C	LTE1	P07866	1435 aa		10.46	□□□□□ -0.73
RSC30	YHR056C	TAF2	P23255	1407 aa		10.44	□□□□□ -0.74
RSC30	YHR056C	ESP1	Q03018	1630 aa		10.44	□□□□□ -0.74
RSC30	YHR056C	SSN2	P38931	1420 aa		10.41	□□□□□ -0.74
RSC30	YHR056C	UFD4	P33202	1483 aa		10.41	□□□□□ -0.74
RSC30	YHR056C	CDC25	P04821	1589 aa		10.36	□□□□□ -0.75
RSC30	YHR056C	YPK9	Q12697	1472 aa		10.36	□□□□□ -0.75
RSC30	YHR056C	CHD1	P32657	1468 aa		10.34	□□□□□ -0.75
RSC30	YHR056C	SCC2	Q04002	1493 aa		10.34	□□□□□ -0.75
RSC30	YHR056C	RKR1	Q04781	1562 aa		10.32	□□□□□ -0.76
RSC30	YHR056C	RPO31	P04051	1460 aa		10.32	□□□□□ -0.76
RSC30	YHR056C	RPA190	P10964	1664 aa	Known RBP	10.32	□□□□□ -0.76
RSC30	YHR056C	ESC1	Q03661	1658 aa	Known RBP	10.31	□□□□□ -0.76
RSC30	YHR056C	DNF1	P32660	1571 aa		10.26	□□□□□ -0.77
RSC30	YHR056C	GEA2	P39993	1459 aa	Known RBP	10.26	□□□□□ -0.77
RSC30	YHR056C	BNI1	P41832	1953 aa		10.26	□□□□□ -0.77
RSC30	YHR056C	PAN1	P32521	1480 aa		10.24	□□□□□ -0.77
RSC30	YHR056C	TY1B-BR	Q12193	1756 aa		10.22	□□□□□ -0.77
RSC30	YHR056C	TY1B-GR3	Q12316	1755 aa		10.22	□□□□□ -0.77
RSC30	YHR056C	TY1B-OR	Q92393	1755 aa		10.22	□□□□□ -0.77
RSC30	YHR056C	TY2B-LR1	P0C2J3	1770 aa		10.19	□□□□□ -0.78
RSC30	YHR056C	TY2B-F	P0CX63	1770 aa		10.19	□□□□□ -0.78
RSC30	YHR056C	TY2B-GR2	P0CX64	1770 aa		10.19	□□□□□ -0.78
RSC30	YHR056C	TY2B-C	P25384	1770 aa		10.19	□□□□□ -0.78
RSC30	YHR056C	TY2B-DR2	Q03494	1770 aa		10.19	□□□□□ -0.78
RSC30	YHR056C	TY1B-DR1	Q03855	1755 aa		10.19	□□□□□ -0.78
RSC30	YHR056C	TY2B-DR3	Q07791	1770 aa	Known RBP	10.19	□□□□□ -0.78
RSC30	YHR056C	TY2B-OR1	Q12113	1770 aa		10.19	□□□□□ -0.78
RSC30	YHR056C	TY2B-DR1	Q12472	1770 aa		10.19	□□□□□ -0.78
RSC30	YHR056C	TY2B-OR2	Q12501	1770 aa		10.19	□□□□□ -0.78
RSC30	YHR056C	YFR006W	P43590	535 aa		10.14	□□□□□ -0.79
RSC30	YHR056C	TOP2	P06786	1428 aa	Known RBP	10.1	□□□□□ -0.79
RSC30	YHR056C	ABP1	P15891	592 aa	Known RBP	10.09	□□□□□ -0.79
RSC30	YHR056C	MMS1	Q06211	1407 aa		10.09	□□□□□ -0.79
RSC30	YHR056C	TY1B-H	O13535	1793 aa		10.09	□□□□□ -0.79
RSC30	YHR056C	TY1B-DR5	P0C2I2	1755 aa		10.09	□□□□□ -0.79
RSC30	YHR056C	TY1B-DR6	P0C2I3	1755 aa		10.09	□□□□□ -0.79
RSC30	YHR056C	TY1B-LR2	P0C2I5	1755 aa		10.09	□□□□□ -0.79
RSC30	YHR056C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	10.09	□□□□□ -0.79
RSC30	YHR056C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	10.09	□□□□□ -0.79
RSC30	YHR056C	TY1B-PR2	P0C2J0	1756 aa		10.09	□□□□□ -0.79
RSC30	YHR056C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	10.09	□□□□□ -0.79
RSC30	YHR056C	TY1B-JR1	P47098	1755 aa		10.09	□□□□□ -0.79
RSC30	YHR056C	TY1B-ML2	Q03434	1755 aa	Known RBP	10.09	□□□□□ -0.79
RSC30	YHR056C	TY1B-ER1	Q03612	1755 aa		10.09	□□□□□ -0.79
RSC30	YHR056C	TY1B-ML1	Q04711	1755 aa	Known RBP	10.09	□□□□□ -0.79
RSC30	YHR056C	TY1B-GR2	Q12269	1755 aa		10.09	□□□□□ -0.79
RSC30	YHR056C	TY1B-OL	Q12273	1755 aa		10.09	□□□□□ -0.79
RSC30	YHR056C	TY1B-PL	Q12414	1755 aa	Known RBP	10.09	□□□□□ -0.79
RSC30	YHR056C	IRC20	Q06554	1556 aa		10.09	□□□□□ -0.79
RSC30	YHR056C	ITT1	Q04638	464 aa		10.08	□□□□□ -0.8
RSC30	YHR056C	MMS22	Q06164	1454 aa		10.06	□□□□□ -0.8
RSC30	YHR056C	TY2B-B	Q12491	1770 aa		10.06	□□□□□ -0.8
RSC30	YHR056C	TRM732	Q03496	1420 aa		10.05	□□□□□ -0.8
RSC30	YHR056C	DRS2	P39524	1355 aa		10.04	□□□□□ -0.8
RSC30	YHR056C	DRS1	P32892	752 aa	Known RBP	10.02	□□□□□ -0.8
RSC30	YHR056C	TY1B-DR3	Q99231	1755 aa		10	□□□□□ -0.81
RSC30	YHR056C	RQC2	Q12532	1038 aa	Known RBP	10	□□□□□ -0.81
RSC30	YHR056C	VPS15	P22219	1454 aa		9.98	□□□□□ -0.81
RSC30	YHR056C	YRF1-1	P0CX20	1796 aa		9.96	□□□□□ -0.82
RSC30	YHR056C	YRF1-5	P0CX21	1796 aa		9.96	□□□□□ -0.82
RSC30	YHR056C	YRF1-8	P0CX22	1796 aa		9.96	□□□□□ -0.82
RSC30	YHR056C	NUP159	P40477	1460 aa		9.96	□□□□□ -0.82
RSC30	YHR056C	SMC4	Q12267	1418 aa		9.92	□□□□□ -0.82
RSC30	YHR056C	DNF2	Q12675	1612 aa		9.92	□□□□□ -0.82
RSC30	YHR056C	NTE1	Q04958	1679 aa		9.9	□□□□□ -0.82
RSC30	YHR056C	POL1	P13382	1468 aa		9.89	□□□□□ -0.83
RSC30	YHR056C	SPP41	P38904	1435 aa		9.87	□□□□□ -0.83
RSC30	YHR056C	RPO21	P04050	1733 aa	Known RBP	9.86	□□□□□ -0.83
RSC30	YHR056C	TY1B-JR2	P47100	1755 aa	Known RBP	9.85	□□□□□ -0.83

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms