RNA–Protein interactions for RNA: YGR038C-B

YGR038C-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR038C-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR038C-BYGR038C-B CCE1Q03702 353 aa2.9□□□□□ -1.95
YGR038C-BYGR038C-B VTA1Q06263 330 aa2.9□□□□□ -1.95
YGR038C-BYGR038C-B SNQ2P32568 1501 aaKnown RBP2.9□□□□□ -1.95
YGR038C-BYGR038C-B MAS1P10507 462 aa2.9□□□□□ -1.95
YGR038C-BYGR038C-B RGP1P16664 663 aa2.9□□□□□ -1.95
YGR038C-BYGR038C-B YKL075CP36083 450 aa2.9□□□□□ -1.95
YGR038C-BYGR038C-B IFA38P38286 347 aa2.9□□□□□ -1.95
YGR038C-BYGR038C-B ERG7P38604 731 aa2.9□□□□□ -1.95
YGR038C-BYGR038C-B FTR1P40088 404 aa2.9□□□□□ -1.95
YGR038C-BYGR038C-B EMP47P43555 445 aa2.9□□□□□ -1.95
YGR038C-BYGR038C-B YML020WQ03722 664 aa2.9□□□□□ -1.95
YGR038C-BYGR038C-B SHE9Q04172 456 aa2.9□□□□□ -1.95
YGR038C-BYGR038C-B SMD2Q06217 110 aaKnown RBP2.9□□□□□ -1.95
YGR038C-BYGR038C-B BSP1Q06604 576 aa2.9□□□□□ -1.95
YGR038C-BYGR038C-B TIP41Q12199 356 aa2.9□□□□□ -1.95
YGR038C-BYGR038C-B LAT1P12695 482 aaKnown RBP2.9□□□□□ -1.95
YGR038C-BYGR038C-B APE3P37302 537 aaKnown RBP2.9□□□□□ -1.95
YGR038C-BYGR038C-B HSM3P38348 480 aa2.9□□□□□ -1.95
YGR038C-BYGR038C-B NOP13P53883 403 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
YGR038C-BYGR038C-B GIM3P53900 129 aa2.9□□□□□ -1.95
YGR038C-BYGR038C-B YMR265CQ03508 461 aaKnown RBP2.9□□□□□ -1.95
YGR038C-BYGR038C-B PRP42Q03776 544 aaKnown RBP2.9□□□□□ -1.95
YGR038C-BYGR038C-B HIR3P47171 1648 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B IKI3Q06706 1349 aaKnown RBP2.89□□□□□ -1.95
YGR038C-BYGR038C-B ICL1P28240 557 aaPredicted RBP2.89□□□□□ -1.95
YGR038C-BYGR038C-B AKL1P38080 1108 aaKnown RBP2.89□□□□□ -1.95
YGR038C-BYGR038C-B OLA1P38219 394 aaKnown RBP2.89□□□□□ -1.95
YGR038C-BYGR038C-B CTM1P38818 585 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B NOC2P39744 710 aaKnown RBP2.89□□□□□ -1.95
YGR038C-BYGR038C-B LAM5P43560 674 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B YOL098CQ12496 1037 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B OM45P16547 393 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B HEM3P28789 327 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B SMI1P32566 505 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B UBP13P38187 747 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B ACA1P39970 489 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B PEX15Q08215 383 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B DNL4Q08387 944 aaPredicted RBP2.89□□□□□ -1.95
YGR038C-BYGR038C-B DBP5P20449 482 aaKnown RBP2.89□□□□□ -1.95
YGR038C-BYGR038C-B SIT4P20604 311 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B MEI4P29467 408 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B EFB1P32471 206 aaKnown RBP2.89□□□□□ -1.95
YGR038C-BYGR038C-B GPB2P39717 880 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B BUD16P39988 312 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B RTT105P40063 208 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B IRC8P47046 822 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B SHE10P53075 577 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B BIO5P53744 561 aaKnown RBP2.89□□□□□ -1.95
YGR038C-BYGR038C-B GDE1Q02979 1223 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
YGR038C-BYGR038C-B CSC1Q06538 782 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B TSR1Q07381 788 aaKnown RBP2.89□□□□□ -1.95
YGR038C-BYGR038C-B ATG20Q07528 640 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B MSD1P15179 658 aaKnown RBP2.89□□□□□ -1.95
YGR038C-BYGR038C-B NDI1P32340 513 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B VPH1P32563 840 aaKnown RBP2.89□□□□□ -1.95
YGR038C-BYGR038C-B SSE1P32589 693 aaKnown RBP2.89□□□□□ -1.95
YGR038C-BYGR038C-B RFC1P38630 861 aaKnown RBP2.89□□□□□ -1.95
YGR038C-BYGR038C-B MXR1P40029 184 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B FAU1P40099 211 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B TPO2P53283 614 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B VPS62P53285 467 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B ENT2Q05785 613 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B RGA2Q06407 1009 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B DIS3Q08162 1001 aaKnown RBP2.89□□□□□ -1.95
YGR038C-BYGR038C-B TMA17Q12513 150 aa2.89□□□□□ -1.95
YGR038C-BYGR038C-B RPB2P08518 1224 aaKnown RBP2.88□□□□□ -1.95
YGR038C-BYGR038C-B HES1P35843 434 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B SRP68P38687 599 aaKnown RBP2.88□□□□□ -1.95
YGR038C-BYGR038C-B KAP123P40069 1113 aaKnown RBP2.88□□□□□ -1.95
YGR038C-BYGR038C-B PIL1P53252 339 aaKnown RBP2.88□□□□□ -1.95
YGR038C-BYGR038C-B DBP6P53734 629 aaKnown RBP2.88□□□□□ -1.95
YGR038C-BYGR038C-B YLR001CQ07895 862 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B AUS1Q08409 1394 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B RPS6AP0CX37 236 aaKnown RBP2.88□□□□□ -1.95
YGR038C-BYGR038C-B RPS6BP0CX38 236 aaPredicted RBP2.88□□□□□ -1.95
YGR038C-BYGR038C-B MRPL32P25348 183 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B NIP100P33420 868 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B SPC34P36131 295 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B MRPL40P36534 297 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B YHL044WP38727 235 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B VAC8P39968 578 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B PSY2P40164 858 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B NET1P47035 1189 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B MDE1P47095 244 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B HXT16P47185 567 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B TOF2Q02208 771 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B PEX29Q03370 554 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B VPS72Q03388 795 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B RSF1Q05043 376 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B EFG1Q3E705 233 aaKnown RBP2.88□□□□□ -1.95
YGR038C-BYGR038C-B MHP1P43638 1398 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B RPL8BP29453 256 aaKnown RBP2.88□□□□□ -1.95
YGR038C-BYGR038C-B KDX1P36005 433 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B PET10P36139 283 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B VPS27P40343 622 aaKnown RBP2.88□□□□□ -1.95
YGR038C-BYGR038C-B YGR125WP53273 1036 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B TAP42Q04372 366 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B YDL124WQ07551 312 aaKnown RBP2.88□□□□□ -1.95
YGR038C-BYGR038C-B KEL3Q08979 651 aaPredicted RBP2.88□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms