RNA–Protein interactions for RNA: YBR280C

SAF1, Transcript of F-Box protein involved in proteasome-dependent degradation of Aah1p, yeastyeast

Gene SAF1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SAF1YBR280C DUR3P33413 735 aa5.37□□□□□ -1.55
SAF1YBR280C OSH3P38713 996 aaKnown RBP5.37□□□□□ -1.55
SAF1YBR280C PES4P39684 611 aa5.37□□□□□ -1.55
SAF1YBR280C RPS15Q01855 142 aaKnown RBP5.37□□□□□ -1.55
SAF1YBR280C VPS30Q02948 557 aa5.37□□□□□ -1.55
SAF1YBR280C SUE1Q06524 206 aa5.37□□□□□ -1.55
SAF1YBR280C DAP1Q12091 152 aa5.37□□□□□ -1.55
SAF1YBR280C PHR1P05066 565 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
SAF1YBR280C RIT1P23796 513 aa5.36□□□□□ -1.55
SAF1YBR280C BRL1P38770 471 aa5.36□□□□□ -1.55
SAF1YBR280C AZR1P50080 613 aa5.36□□□□□ -1.55
SAF1YBR280C UFD2P54860 961 aa5.36□□□□□ -1.55
SAF1YBR280C GUD1Q07729 489 aa5.36□□□□□ -1.55
SAF1YBR280C UBR2Q07963 1872 aa5.36□□□□□ -1.55
SAF1YBR280C NUC1P08466 329 aa5.36□□□□□ -1.55
SAF1YBR280C ESF1Q06344 628 aaKnown RBP5.36□□□□□ -1.55
SAF1YBR280C TOR2P32600 2474 aaKnown RBP5.36□□□□□ -1.55
SAF1YBR280C MET1P36150 593 aa5.35□□□□□ -1.55
SAF1YBR280C POA1P38218 177 aa5.35□□□□□ -1.55
SAF1YBR280C GUA1P38625 525 aaKnown RBP5.35□□□□□ -1.55
SAF1YBR280C INP51P40559 946 aaKnown RBP5.35□□□□□ -1.55
SAF1YBR280C MRPS35P53292 345 aa5.35□□□□□ -1.55
SAF1YBR280C MSC2Q03455 724 aa5.35□□□□□ -1.55
SAF1YBR280C KTR1P27810 393 aaKnown RBP5.35□□□□□ -1.55
SAF1YBR280C RPL8BP29453 256 aaKnown RBP5.35□□□□□ -1.55
SAF1YBR280C YGL015CP33199 130 aa5.35□□□□□ -1.55
SAF1YBR280C MYO3P36006 1272 aa5.35□□□□□ -1.55
SAF1YBR280C NDT80P38830 627 aa5.35□□□□□ -1.55
SAF1YBR280C ALD5P40047 520 aaKnown RBP5.35□□□□□ -1.55
SAF1YBR280C VID30P53076 958 aa5.35□□□□□ -1.55
SAF1YBR280C BRE1Q07457 700 aaKnown RBP5.35□□□□□ -1.55
SAF1YBR280C ATG11Q12527 1178 aa5.35□□□□□ -1.55
SAF1YBR280C TY1B-AO13527 1196 aaKnown RBP5.34□□□□□ -1.55
SAF1YBR280C SWI6P09959 803 aa5.34□□□□□ -1.55
SAF1YBR280C OPI1P21957 404 aa5.34□□□□□ -1.55
SAF1YBR280C ANP1P32629 500 aa5.34□□□□□ -1.55
SAF1YBR280C RDH54P38086 958 aa5.34□□□□□ -1.55
SAF1YBR280C TVP23P38962 199 aa5.34□□□□□ -1.55
SAF1YBR280C RPS7BP48164 190 aaKnown RBP5.34□□□□□ -1.55
SAF1YBR280C CTR1P49573 406 aa5.34□□□□□ -1.55
SAF1YBR280C FMS1P50264 508 aa5.34□□□□□ -1.55
SAF1YBR280C LIF1P53150 421 aa5.34□□□□□ -1.55
SAF1YBR280C LSB1P53281 241 aa5.34□□□□□ -1.55
SAF1YBR280C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
SAF1YBR280C EMI2Q04409 500 aaKnown RBP5.34□□□□□ -1.55
SAF1YBR280C SPT2P06843 333 aaPredicted RBP5.33□□□□□ -1.56
SAF1YBR280C FMP10P40098 244 aa5.33□□□□□ -1.56
SAF1YBR280C IDI1P15496 288 aa5.33□□□□□ -1.56
SAF1YBR280C OYE3P41816 400 aaPredicted RBP5.33□□□□□ -1.56
SAF1YBR280C SPO74P45819 413 aa5.33□□□□□ -1.56
SAF1YBR280C RPT6Q01939 405 aaKnown RBP5.33□□□□□ -1.56
SAF1YBR280C YLL058WQ12198 575 aa5.33□□□□□ -1.56
SAF1YBR280C URK1P27515 501 aa5.32□□□□□ -1.56
SAF1YBR280C HDA1P53973 706 aa5.32□□□□□ -1.56
SAF1YBR280C AFT1P22149 690 aa5.31□□□□□ -1.56
SAF1YBR280C CDC27P38042 758 aa5.31□□□□□ -1.56
SAF1YBR280C DSF2P38213 736 aa5.31□□□□□ -1.56
SAF1YBR280C UBP15P50101 1230 aa5.31□□□□□ -1.56
SAF1YBR280C INP52P50942 1183 aa5.31□□□□□ -1.56
SAF1YBR280C PTA1Q01329 785 aaPredicted RBP5.31□□□□□ -1.56
SAF1YBR280C CLF1Q12309 687 aaPredicted RBP5.31□□□□□ -1.56
SAF1YBR280C RPL17AP05740 184 aaKnown RBP5.31□□□□□ -1.56
SAF1YBR280C FUB1P25659 250 aa5.31□□□□□ -1.56
SAF1YBR280C RPL17BP46990 184 aaKnown RBP5.31□□□□□ -1.56
SAF1YBR280C MET13P53128 600 aa5.31□□□□□ -1.56
SAF1YBR280C HEH2Q03281 663 aa5.31□□□□□ -1.56
SAF1YBR280C YML020WQ03722 664 aa5.31□□□□□ -1.56
SAF1YBR280C YLR326WQ06170 240 aaKnown RBP5.31□□□□□ -1.56
SAF1YBR280C TOR1P35169 2470 aa5.3□□□□□ -1.56
SAF1YBR280C SRP54P20424 541 aaKnown RBP5.3□□□□□ -1.56
SAF1YBR280C RFC1P38630 861 aaKnown RBP5.3□□□□□ -1.56
SAF1YBR280C YGR035CP53222 116 aa5.3□□□□□ -1.56
SAF1YBR280C SKY1Q03656 742 aa5.3□□□□□ -1.56
SAF1YBR280C MYO5Q04439 1219 aaKnown RBP5.3□□□□□ -1.56
SAF1YBR280C SSF2Q12153 453 aaPredicted RBP5.3□□□□□ -1.56
SAF1YBR280C SEC20P28791 383 aa5.29□□□□□ -1.56
SAF1YBR280C CSM2P40465 213 aa5.29□□□□□ -1.56
SAF1YBR280C YNL034WP53963 612 aa5.29□□□□□ -1.56
SAF1YBR280C YNL018CP53976 612 aa5.29□□□□□ -1.56
SAF1YBR280C MDM1Q01846 1127 aa5.29□□□□□ -1.56
SAF1YBR280C MYO1P08964 1928 aa5.29□□□□□ -1.56
SAF1YBR280C CDC16P09798 840 aa5.29□□□□□ -1.56
SAF1YBR280C MAK31P23059 88 aa5.29□□□□□ -1.56
SAF1YBR280C KIN82P25341 720 aa5.29□□□□□ -1.56
SAF1YBR280C PWP2P25635 923 aaKnown RBP5.29□□□□□ -1.56
SAF1YBR280C UGA4P32837 571 aa5.29□□□□□ -1.56
SAF1YBR280C SMY2P32909 740 aaKnown RBP5.29□□□□□ -1.56
SAF1YBR280C SKI2P35207 1287 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
SAF1YBR280C SPN1Q06505 410 aaPredicted RBP5.29□□□□□ -1.56
SAF1YBR280C MOT1P32333 1867 aa5.28□□□□□ -1.56
SAF1YBR280C POL3P15436 1097 aa5.28□□□□□ -1.56
SAF1YBR280C RPL8AP17076 256 aaKnown RBP5.28□□□□□ -1.56
SAF1YBR280C SYN8P31377 255 aa5.28□□□□□ -1.56
SAF1YBR280C RER2P35196 286 aa5.28□□□□□ -1.56
SAF1YBR280C CRG1P38892 291 aaRIP-Chip data5.28□□□□□ -1.56not detected
SAF1YBR280C TPM2P40414 161 aa5.28□□□□□ -1.56
SAF1YBR280C VIP1Q06685 1146 aaKnown RBP5.28□□□□□ -1.56
SAF1YBR280C OPT1P40897 799 aa5.27□□□□□ -1.57
SAF1YBR280C PSP2P50109 593 aaKnown RBP5.27□□□□□ -1.57
SAF1YBR280C HUL5P53119 910 aa5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms