RNA–Protein interactions for RNA: YBR280C

SAF1, Transcript of F-Box protein involved in proteasome-dependent degradation of Aah1p, yeastyeast

Gene SAF1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SAF1YBR280C INO80P53115 1489 aa10.03□□□□□ -0.8
SAF1YBR280C MON2P48563 1636 aaPredicted RBP10□□□□□ -0.81
SAF1YBR280C DNA2P38859 1522 aa9.55□□□□□ -0.88
SAF1YBR280C SWR1Q05471 1514 aa9.49□□□□□ -0.89
SAF1YBR280C KOG1P38873 1557 aa9.38□□□□□ -0.91
SAF1YBR280C TCB3Q03640 1545 aaKnown RBP9.35□□□□□ -0.91
SAF1YBR280C TY1B-DR4Q07793 1604 aa9.32□□□□□ -0.92
SAF1YBR280C RSE1Q04693 1361 aaKnown RBP9.29□□□□□ -0.92
SAF1YBR280C SGS1P35187 1447 aa9.13□□□□□ -0.95
SAF1YBR280C SPT6P23615 1451 aaKnown RBP8.99□□□□□ -0.97
SAF1YBR280C HSL1P34244 1518 aa8.99□□□□□ -0.97
SAF1YBR280C SPA2P23201 1466 aaKnown RBP8.91□□□□□ -0.98
SAF1YBR280C ECM5Q03214 1411 aa8.87□□□□□ -0.99
SAF1YBR280C MTC1P47018 478 aaKnown RBP8.81□□□□□ -1
SAF1YBR280C HIR3P47171 1648 aa8.79□□□□□ -1
SAF1YBR280C BUD4P47136 1447 aa8.77□□□□□ -1.01
SAF1YBR280C THO2P53552 1597 aaKnown RBP8.75□□□□□ -1.01
SAF1YBR280C MDS3P53094 1487 aa8.69□□□□□ -1.02
SAF1YBR280C XRN1P22147 1528 aaKnown RBP8.61□□□□□ -1.03
SAF1YBR280C PEP1P32319 1579 aa8.57□□□□□ -1.04
SAF1YBR280C REV3P14284 1504 aa8.56□□□□□ -1.04
SAF1YBR280C ATG2P53855 1592 aa8.49□□□□□ -1.05
SAF1YBR280C BPT1P14772 1559 aa8.48□□□□□ -1.05
SAF1YBR280C SKI3P17883 1432 aaKnown RBP8.39□□□□□ -1.07
SAF1YBR280C TAF2P23255 1407 aa8.37□□□□□ -1.07
SAF1YBR280C SSN2P38931 1420 aa8.33□□□□□ -1.08
SAF1YBR280C YCF1P39109 1515 aaKnown RBP8.33□□□□□ -1.08
SAF1YBR280C SIN3P22579 1536 aa8.3□□□□□ -1.08
SAF1YBR280C SSK2P53599 1579 aa8.3□□□□□ -1.08
SAF1YBR280C UFD4P33202 1483 aa8.23□□□□□ -1.09
SAF1YBR280C ESP1Q03018 1630 aa8.2□□□□□ -1.1
SAF1YBR280C MIF2P35201 549 aa8.15□□□□□ -1.1
SAF1YBR280C SCC2Q04002 1493 aa8.14□□□□□ -1.11
SAF1YBR280C YPK9Q12697 1472 aa8.11□□□□□ -1.11
SAF1YBR280C MET5P47169 1442 aa8.11□□□□□ -1.11
SAF1YBR280C CHD1P32657 1468 aa8.1□□□□□ -1.11
SAF1YBR280C CDC25P04821 1589 aa8.1□□□□□ -1.11
SAF1YBR280C RQC2Q12532 1038 aaKnown RBP8.09□□□□□ -1.11
SAF1YBR280C DNF1P32660 1571 aa8.09□□□□□ -1.12
SAF1YBR280C RPO31P04051 1460 aa8.07□□□□□ -1.12
SAF1YBR280C MYO2P19524 1574 aaKnown RBP8.07□□□□□ -1.12
SAF1YBR280C DRS1P32892 752 aaKnown RBP8.07□□□□□ -1.12
SAF1YBR280C ESC1Q03661 1658 aaKnown RBP8.06□□□□□ -1.12
SAF1YBR280C LTE1P07866 1435 aa8.05□□□□□ -1.12
SAF1YBR280C PAN1P32521 1480 aa8.02□□□□□ -1.13
SAF1YBR280C RKR1Q04781 1562 aa8.01□□□□□ -1.13
SAF1YBR280C TY2B-LR1P0C2J3 1770 aa8.01□□□□□ -1.13
SAF1YBR280C TY2B-FP0CX63 1770 aa8.01□□□□□ -1.13
SAF1YBR280C TY2B-GR2P0CX64 1770 aa8.01□□□□□ -1.13
SAF1YBR280C TY2B-CP25384 1770 aa8.01□□□□□ -1.13
SAF1YBR280C TY2B-DR2Q03494 1770 aa8.01□□□□□ -1.13
SAF1YBR280C TY1B-DR1Q03855 1755 aa8.01□□□□□ -1.13
SAF1YBR280C TY2B-DR3Q07791 1770 aaKnown RBP8.01□□□□□ -1.13
SAF1YBR280C TY2B-OR1Q12113 1770 aa8.01□□□□□ -1.13
SAF1YBR280C TY2B-DR1Q12472 1770 aa8.01□□□□□ -1.13
SAF1YBR280C TY2B-OR2Q12501 1770 aa8.01□□□□□ -1.13
SAF1YBR280C TY1B-BRQ12193 1756 aa7.99□□□□□ -1.13
SAF1YBR280C TY1B-GR3Q12316 1755 aa7.99□□□□□ -1.13
SAF1YBR280C TY1B-ORQ92393 1755 aa7.99□□□□□ -1.13
SAF1YBR280C RPA190P10964 1664 aaKnown RBP7.99□□□□□ -1.13
SAF1YBR280C BNI1P41832 1953 aa7.97□□□□□ -1.13
SAF1YBR280C ITT1Q04638 464 aa7.95□□□□□ -1.14
SAF1YBR280C GEA2P39993 1459 aaKnown RBP7.95□□□□□ -1.14
SAF1YBR280C TOP2P06786 1428 aaKnown RBP7.94□□□□□ -1.14
SAF1YBR280C ABP1P15891 592 aaKnown RBP7.93□□□□□ -1.14
SAF1YBR280C MMS22Q06164 1454 aa7.91□□□□□ -1.14
SAF1YBR280C TY2B-BQ12491 1770 aa7.9□□□□□ -1.15
SAF1YBR280C TRM732Q03496 1420 aa7.89□□□□□ -1.15
SAF1YBR280C TY1B-HO13535 1793 aa7.89□□□□□ -1.15
SAF1YBR280C TY1B-DR5P0C2I2 1755 aa7.89□□□□□ -1.15
SAF1YBR280C TY1B-DR6P0C2I3 1755 aa7.89□□□□□ -1.15
SAF1YBR280C TY1B-LR2P0C2I5 1755 aa7.89□□□□□ -1.15
SAF1YBR280C TY1B-LR3P0C2I6 1755 aaKnown RBP7.89□□□□□ -1.15
SAF1YBR280C TY1B-PR1P0C2I9 1755 aaKnown RBP7.89□□□□□ -1.15
SAF1YBR280C TY1B-PR2P0C2J0 1756 aa7.89□□□□□ -1.15
SAF1YBR280C TY1B-PR3P0C2J1 1755 aaKnown RBP7.89□□□□□ -1.15
SAF1YBR280C TY1B-JR1P47098 1755 aa7.89□□□□□ -1.15
SAF1YBR280C TY1B-ML2Q03434 1755 aaKnown RBP7.89□□□□□ -1.15
SAF1YBR280C TY1B-ER1Q03612 1755 aa7.89□□□□□ -1.15
SAF1YBR280C TY1B-ML1Q04711 1755 aaKnown RBP7.89□□□□□ -1.15
SAF1YBR280C TY1B-GR2Q12269 1755 aa7.89□□□□□ -1.15
SAF1YBR280C TY1B-OLQ12273 1755 aa7.89□□□□□ -1.15
SAF1YBR280C TY1B-PLQ12414 1755 aaKnown RBP7.89□□□□□ -1.15
SAF1YBR280C YFR006WP43590 535 aa7.88□□□□□ -1.15
SAF1YBR280C MMS1Q06211 1407 aa7.87□□□□□ -1.15
SAF1YBR280C TY1B-DR3Q99231 1755 aa7.86□□□□□ -1.15
SAF1YBR280C DRS2P39524 1355 aa7.82□□□□□ -1.16
SAF1YBR280C NUP159P40477 1460 aa7.82□□□□□ -1.16
SAF1YBR280C VPS15P22219 1454 aa7.81□□□□□ -1.16
SAF1YBR280C POL1P13382 1468 aa7.8□□□□□ -1.16
SAF1YBR280C YRF1-1P0CX20 1796 aa7.8□□□□□ -1.16
SAF1YBR280C YRF1-5P0CX21 1796 aa7.8□□□□□ -1.16
SAF1YBR280C YRF1-8P0CX22 1796 aa7.8□□□□□ -1.16
SAF1YBR280C SPP41P38904 1435 aa7.79□□□□□ -1.16
SAF1YBR280C SMC4Q12267 1418 aa7.78□□□□□ -1.16
SAF1YBR280C YOR1P53049 1477 aa7.76□□□□□ -1.17
SAF1YBR280C IRC20Q06554 1556 aa7.75□□□□□ -1.17
SAF1YBR280C STU1P38198 1513 aa7.74□□□□□ -1.17
SAF1YBR280C NTE1Q04958 1679 aa7.73□□□□□ -1.17
SAF1YBR280C TSC11P40061 1430 aa7.73□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms