RNA–Protein interactions for RNA: YBR074W

PFF1, Transcript of Multi-spanning vacuolar membrane protease, yeast

Gene PFF1, Length 2,931 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PFF1	YBR074W	PRP43	P53131	767 aa	Known RBP	3.18	□□□□□ -1.9
PFF1	YBR074W	SML1	Q04964	104 aa		3.18	□□□□□ -1.9
PFF1	YBR074W	ABP140	Q08641	628 aa	Known RBP	3.18	□□□□□ -1.9
PFF1	YBR074W	RGP1	P16664	663 aa		3.18	□□□□□ -1.9
PFF1	YBR074W	MCM2	P29469	868 aa		3.18	□□□□□ -1.9
PFF1	YBR074W	ALD4	P46367	519 aa	Known RBP	3.18	□□□□□ -1.9
PFF1	YBR074W	PNP1	Q05788	311 aa		3.18	□□□□□ -1.9
PFF1	YBR074W	FUR4	P05316	633 aa	Known RBP	3.17	□□□□□ -1.9
PFF1	YBR074W	RPL22A	P05749	121 aa	Known RBP	3.17	□□□□□ -1.9
PFF1	YBR074W	ISC10	P32645	267 aa		3.17	□□□□□ -1.9
PFF1	YBR074W	RRP1	P35178	278 aa	Predicted RBP	3.17	□□□□□ -1.9
PFF1	YBR074W	PXL1	P36166	706 aa		3.17	□□□□□ -1.9
PFF1	YBR074W	RFT1	P38206	574 aa	Predicted RBP	3.17	□□□□□ -1.9
PFF1	YBR074W	FIR1	P40020	876 aa		3.17	□□□□□ -1.9
PFF1	YBR074W	FPR4	Q06205	392 aa	Predicted RBP	3.17	□□□□□ -1.9
PFF1	YBR074W	CCP1	P00431	361 aa		3.17	□□□□□ -1.9
PFF1	YBR074W	RAD3	P06839	778 aa		3.17	□□□□□ -1.9
PFF1	YBR074W	DYS1	P38791	387 aa		3.17	□□□□□ -1.9
PFF1	YBR074W	AI1	P03875	834 aa		3.16	□□□□□ -1.9
PFF1	YBR074W	RPS31	P05759	152 aa	Known RBP	3.16	□□□□□ -1.9
PFF1	YBR074W	TRL1	P09880	827 aa	Known RBP	3.16	□□□□□ -1.9
PFF1	YBR074W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
PFF1	YBR074W	RTR1	P40084	226 aa	Predicted RBP	3.16	□□□□□ -1.9
PFF1	YBR074W	RAD26	P40352	1085 aa		3.16	□□□□□ -1.9
PFF1	YBR074W	VTC3	Q02725	835 aa		3.16	□□□□□ -1.9
PFF1	YBR074W	HEH2	Q03281	663 aa		3.16	□□□□□ -1.9
PFF1	YBR074W	CDC3	P32457	520 aa	Known RBP	3.16	□□□□□ -1.9
PFF1	YBR074W	YEL043W	P32618	956 aa		3.16	□□□□□ -1.9
PFF1	YBR074W	MRPL10	P36520	322 aa		3.16	□□□□□ -1.9
PFF1	YBR074W	HXT5	P38695	592 aa		3.16	□□□□□ -1.9
PFF1	YBR074W	MAM1	P40065	302 aa		3.16	□□□□□ -1.9
PFF1	YBR074W	JJJ3	P47138	172 aa		3.16	□□□□□ -1.9
PFF1	YBR074W	FAR11	P53917	953 aa		3.16	□□□□□ -1.9
PFF1	YBR074W	SYT1	Q06836	1226 aa		3.16	□□□□□ -1.9
PFF1	YBR074W	BMS1	Q08965	1183 aa	Known RBP	3.16	□□□□□ -1.9
PFF1	YBR074W	CYC8	P14922	966 aa		3.16	□□□□□ -1.9
PFF1	YBR074W	MRPL33	P20084	86 aa		3.16	□□□□□ -1.9
PFF1	YBR074W	YBR197C	P38306	217 aa		3.16	□□□□□ -1.9
PFF1	YBR074W	QDR2	P40474	542 aa		3.16	□□□□□ -1.9
PFF1	YBR074W	MSH4	P40965	878 aa	Predicted RBP	3.16	□□□□□ -1.9
PFF1	YBR074W	NPA3	P47122	385 aa		3.16	□□□□□ -1.9
PFF1	YBR074W	YNL165W	P53891	406 aa		3.16	□□□□□ -1.9
PFF1	YBR074W	ATG9	Q12142	997 aa		3.16	□□□□□ -1.9
PFF1	YBR074W	SEC39	Q12745	709 aa		3.16	□□□□□ -1.9
PFF1	YBR074W	DDP1	Q99321	188 aa	Known RBP	3.16	□□□□□ -1.9
PFF1	YBR074W	MIC60	P36112	540 aa		3.15	□□□□□ -1.9
PFF1	YBR074W	MET1	P36150	593 aa		3.15	□□□□□ -1.9
PFF1	YBR074W	GEF1	P37020	779 aa		3.15	□□□□□ -1.9
PFF1	YBR074W	PPX1	P38698	397 aa		3.15	□□□□□ -1.9
PFF1	YBR074W	RTT107	P38850	1070 aa		3.15	□□□□□ -1.9
PFF1	YBR074W	CWC15	Q03772	175 aa	Known RBP	3.15	□□□□□ -1.9
PFF1	YBR074W	COG4	Q06096	861 aa		3.15	□□□□□ -1.9
PFF1	YBR074W	YPL150W	Q12152	901 aa		3.15	□□□□□ -1.9
PFF1	YBR074W	FAS2	P19097	1887 aa	Known RBP	3.15	□□□□□ -1.91
PFF1	YBR074W	ARD1	P07347	238 aa	Predicted RBP	3.15	□□□□□ -1.91
PFF1	YBR074W	MUD2	P36084	527 aa	Known RBP	3.15	□□□□□ -1.91
PFF1	YBR074W	CCC2	P38995	1004 aa		3.15	□□□□□ -1.91
PFF1	YBR074W	PXA1	P41909	870 aa		3.15	□□□□□ -1.91
PFF1	YBR074W	ENV11	P53246	860 aa		3.15	□□□□□ -1.91
PFF1	YBR074W	KAR5	Q04746	504 aa		3.15	□□□□□ -1.91
PFF1	YBR074W	PET123	P17558	318 aa		3.14	□□□□□ -1.91
PFF1	YBR074W	VMA3	P25515	160 aa		3.14	□□□□□ -1.91
PFF1	YBR074W	FUN12	P39730	1002 aa	Known RBP	3.14	□□□□□ -1.91
PFF1	YBR074W	SPO22	P40511	975 aa		3.14	□□□□□ -1.91
PFF1	YBR074W	RRP15	Q06511	250 aa	Predicted RBP	3.14	□□□□□ -1.91
PFF1	YBR074W	RTT109	Q07794	436 aa		3.14	□□□□□ -1.91
PFF1	YBR074W	NOP8	Q08287	484 aa	Predicted RBP	3.14	□□□□□ -1.91
PFF1	YBR074W	DEP1	P31385	405 aa		3.14	□□□□□ -1.91
PFF1	YBR074W	ALF1	P53904	254 aa		3.14	□□□□□ -1.91
PFF1	YBR074W	YNL011C	P53980	444 aa		3.14	□□□□□ -1.91
PFF1	YBR074W	YML119W	Q03208	357 aa		3.14	□□□□□ -1.91
PFF1	YBR074W	CAB1	Q04430	367 aa		3.14	□□□□□ -1.91
PFF1	YBR074W	NKP2	Q06162	153 aa		3.14	□□□□□ -1.91
PFF1	YBR074W	RSC2	Q06488	889 aa		3.14	□□□□□ -1.91
PFF1	YBR074W	SFI1	Q12369	946 aa		3.14	□□□□□ -1.91
PFF1	YBR074W	PDR18	P53756	1333 aa		3.14	□□□□□ -1.91
PFF1	YBR074W	RPL5	P26321	297 aa	Known RBP	3.13	□□□□□ -1.91
PFF1	YBR074W	DEF1	P35732	738 aa	Known RBP	3.13	□□□□□ -1.91
PFF1	YBR074W	SPR3	P41901	512 aa		3.13	□□□□□ -1.91
PFF1	YBR074W	VPS30	Q02948	557 aa		3.13	□□□□□ -1.91
PFF1	YBR074W	PRP3	Q03338	469 aa	Predicted RBP	3.13	□□□□□ -1.91
PFF1	YBR074W	PEX19	Q07418	342 aa		3.13	□□□□□ -1.91
PFF1	YBR074W	PHM7	Q12252	991 aa		3.13	□□□□□ -1.91
PFF1	YBR074W	BIK1	P11709	440 aa		3.13	□□□□□ -1.91
PFF1	YBR074W	DPB3	P27344	201 aa		3.13	□□□□□ -1.91
PFF1	YBR074W	SUV3	P32580	737 aa		3.13	□□□□□ -1.91
PFF1	YBR074W	ISW1	P38144	1129 aa		3.13	□□□□□ -1.91
PFF1	YBR074W	APM2	P38700	605 aa		3.13	□□□□□ -1.91
PFF1	YBR074W	ALD2	P47771	506 aa		3.13	□□□□□ -1.91
PFF1	YBR074W	CUS1	Q02554	436 aa	Predicted RBP	3.13	□□□□□ -1.91
PFF1	YBR074W	THI72	Q08579	599 aa		3.13	□□□□□ -1.91
PFF1	YBR074W	PUS1	Q12211	544 aa	Known RBP	3.13	□□□□□ -1.91
PFF1	YBR074W	RNA1	P11745	407 aa	Known RBP	3.13	□□□□□ -1.91
PFF1	YBR074W	DAL5	P15365	543 aa		3.13	□□□□□ -1.91
PFF1	YBR074W	ATE1	P16639	503 aa		3.13	□□□□□ -1.91
PFF1	YBR074W	SMC1	P32908	1225 aa		3.13	□□□□□ -1.91
PFF1	YBR074W	SAP190	P36123	1033 aa		3.13	□□□□□ -1.91
PFF1	YBR074W	NPR3	P38742	1146 aa		3.13	□□□□□ -1.91
PFF1	YBR074W	CCT5	P40413	562 aa	Known RBP	3.13	□□□□□ -1.91
PFF1	YBR074W	YJR008W	P47085	338 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms