RNA–Protein interactions for RNA: YOR329C

SCD5, Transcript of Protein required for normal actin organization and endocytosis, yeast

Gene SCD5, Length 2,619 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCD5	YOR329C	MSM1	P22438	575 aa		2.68	□□□□□ -1.98
SCD5	YOR329C	MCM3	P24279	971 aa	Known RBP	2.68	□□□□□ -1.98
SCD5	YOR329C	KTR3	P38130	404 aa	Predicted RBP	2.68	□□□□□ -1.98
SCD5	YOR329C	CCT5	P40413	562 aa	Known RBP	2.68	□□□□□ -1.98
SCD5	YOR329C	RPS15	Q01855	142 aa	Known RBP	2.68	□□□□□ -1.98
SCD5	YOR329C	ECM23	Q02710	187 aa		2.68	□□□□□ -1.98
SCD5	YOR329C	HRQ1	Q05549	1077 aa		2.68	□□□□□ -1.98
SCD5	YOR329C	YLR407W	Q06070	228 aa		2.68	□□□□□ -1.98
SCD5	YOR329C	CTI6	Q08923	506 aa		2.68	□□□□□ -1.98
SCD5	YOR329C	YPL260W	Q08977	551 aa		2.68	□□□□□ -1.98
SCD5	YOR329C	SAM3	Q08986	587 aa		2.68	□□□□□ -1.98
SCD5	YOR329C	RRG1	Q12167	365 aa	Predicted RBP	2.68	□□□□□ -1.98
SCD5	YOR329C	RAD61	Q99359	647 aa		2.68	□□□□□ -1.98
SCD5	YOR329C	LCB1	P25045	558 aa	Known RBP	2.67	□□□□□ -1.98
SCD5	YOR329C	PRX1	P34227	261 aa	Known RBP	2.67	□□□□□ -1.98
SCD5	YOR329C	RER2	P35196	286 aa		2.67	□□□□□ -1.98
SCD5	YOR329C	YKT6	P36015	200 aa	Known RBP	2.67	□□□□□ -1.98
SCD5	YOR329C	TPM2	P40414	161 aa		2.67	□□□□□ -1.98
SCD5	YOR329C	FET4	P40988	552 aa		2.67	□□□□□ -1.98
SCD5	YOR329C	EMP47	P43555	445 aa		2.67	□□□□□ -1.98
SCD5	YOR329C	HXT17	P53631	564 aa		2.67	□□□□□ -1.98
SCD5	YOR329C	NAF1	P53919	492 aa	Known RBP	2.67	□□□□□ -1.98
SCD5	YOR329C	YVH1	Q02256	364 aa	Known RBP	2.67	□□□□□ -1.98
SCD5	YOR329C	VPS20	Q04272	221 aa		2.67	□□□□□ -1.98
SCD5	YOR329C	MRD1	Q06106	887 aa	Known RBP	2.67	□□□□□ -1.98
SCD5	YOR329C	DDP1	Q99321	188 aa	Known RBP	2.67	□□□□□ -1.98
SCD5	YOR329C	HKR1	P41809	1802 aa		2.67	□□□□□ -1.98
SCD5	YOR329C	LAM4	P38800	1345 aa		2.67	□□□□□ -1.98
SCD5	YOR329C	ARG82	P07250	355 aa		2.67	□□□□□ -1.98
SCD5	YOR329C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
SCD5	YOR329C	RPN12	P32496	274 aa		2.67	□□□□□ -1.98
SCD5	YOR329C	RSC30	P38781	883 aa		2.67	□□□□□ -1.98
SCD5	YOR329C	ENV11	P53246	860 aa		2.67	□□□□□ -1.98
SCD5	YOR329C	IRC4	Q03036	179 aa		2.67	□□□□□ -1.98
SCD5	YOR329C	LCD1	Q04377	747 aa		2.67	□□□□□ -1.98
SCD5	YOR329C	INM2	Q05533	292 aa		2.67	□□□□□ -1.98
SCD5	YOR329C	PEX19	Q07418	342 aa		2.67	□□□□□ -1.98
SCD5	YOR329C	TIP41	Q12199	356 aa		2.67	□□□□□ -1.98
SCD5	YOR329C	DUR1,2	P32528	1835 aa	Known RBP	2.66	□□□□□ -1.98
SCD5	YOR329C	SNF3	P10870	884 aa		2.66	□□□□□ -1.98
SCD5	YOR329C	DIT2	P21595	489 aa		2.66	□□□□□ -1.98
SCD5	YOR329C	RNR3	P21672	869 aa	Known RBP	2.66	□□□□□ -1.98
SCD5	YOR329C	SRO9	P25567	434 aa	Known RBP	2.66	□□□□□ -1.98
SCD5	YOR329C	PTK1	P36002	662 aa	Predicted RBP	2.66	□□□□□ -1.98
SCD5	YOR329C	CIC1	P38779	376 aa	Known RBP	2.66	□□□□□ -1.98
SCD5	YOR329C	SPL2	P38839	148 aa		2.66	□□□□□ -1.98
SCD5	YOR329C	CCT3	P39077	534 aa	Known RBP	2.66	□□□□□ -1.98
SCD5	YOR329C	PUS6	P53294	404 aa		2.66	□□□□□ -1.98
SCD5	YOR329C	RPT4	P53549	437 aa	Known RBP	2.66	□□□□□ -1.98
SCD5	YOR329C	YAF9	P53930	226 aa		2.66	□□□□□ -1.98
SCD5	YOR329C	UFD2	P54860	961 aa		2.66	□□□□□ -1.98
SCD5	YOR329C	ELP4	Q02884	456 aa	Known RBP	2.66	□□□□□ -1.98
SCD5	YOR329C	DPL1	Q05567	589 aa		2.66	□□□□□ -1.98
SCD5	YOR329C	NBL1	Q3E7Y6	73 aa		2.66	□□□□□ -1.98
SCD5	YOR329C	PMD1	P32634	1753 aa		2.66	□□□□□ -1.98
SCD5	YOR329C	GAL2	P13181	574 aa		2.66	□□□□□ -1.98
SCD5	YOR329C	GAP1	P19145	602 aa	Predicted RBP	2.66	□□□□□ -1.98
SCD5	YOR329C	MAK31	P23059	88 aa		2.66	□□□□□ -1.98
SCD5	YOR329C	BMH1	P29311	267 aa	Known RBP	2.66	□□□□□ -1.98
SCD5	YOR329C	ANP1	P32629	500 aa		2.66	□□□□□ -1.98
SCD5	YOR329C	MDL2	P33311	773 aa		2.66	□□□□□ -1.98
SCD5	YOR329C	MPE1	P35728	441 aa	Known RBP	2.66	□□□□□ -1.98
SCD5	YOR329C	MYO3	P36006	1272 aa		2.66	□□□□□ -1.98
SCD5	YOR329C	HXT10	P43581	546 aa		2.66	□□□□□ -1.98
SCD5	YOR329C	RRT6	P53117	311 aa	Predicted RBP	2.66	□□□□□ -1.98
SCD5	YOR329C	CUE3	P53137	624 aa	Known RBP	2.66	□□□□□ -1.98
SCD5	YOR329C	YGR117C	P53270	476 aa		2.66	□□□□□ -1.98
SCD5	YOR329C	LSB1	P53281	241 aa		2.66	□□□□□ -1.98
SCD5	YOR329C	KRE33	P53914	1056 aa	Known RBP	2.66	□□□□□ -1.98
SCD5	YOR329C	EAR1	Q03212	550 aa		2.66	□□□□□ -1.98
SCD5	YOR329C	PPM2	Q08282	695 aa		2.66	□□□□□ -1.98
SCD5	YOR329C	SAS3	P34218	831 aa		2.65	□□□□□ -1.98
SCD5	YOR329C	APE3	P37302	537 aa	Known RBP	2.65	□□□□□ -1.98
SCD5	YOR329C	GRX7	P38068	203 aa		2.65	□□□□□ -1.98
SCD5	YOR329C	CIR1	P42940	261 aa		2.65	□□□□□ -1.98
SCD5	YOR329C	NPA3	P47122	385 aa		2.65	□□□□□ -1.98
SCD5	YOR329C	SOL4	P53315	255 aa		2.65	□□□□□ -1.98
SCD5	YOR329C	RPT6	Q01939	405 aa	Known RBP	2.65	□□□□□ -1.98
SCD5	YOR329C	RMD1	Q03441	430 aa		2.65	□□□□□ -1.98
SCD5	YOR329C	SKG3	Q06315	1026 aa		2.65	□□□□□ -1.98
SCD5	YOR329C	SUB2	Q07478	446 aa	Known RBP	2.65	□□□□□ -1.98
SCD5	YOR329C	CSR2	Q12734	1121 aa		2.65	□□□□□ -1.98
SCD5	YOR329C	GSC2	P40989	1895 aa		2.65	□□□□□ -1.99
SCD5	YOR329C	VMA1	P17255	1071 aa	Known RBP	2.65	□□□□□ -1.99
SCD5	YOR329C	COQ1	P18900	473 aa		2.65	□□□□□ -1.99
SCD5	YOR329C	CKA2	P19454	339 aa		2.65	□□□□□ -1.99
SCD5	YOR329C	SRM1	P21827	482 aa		2.65	□□□□□ -1.99
SCD5	YOR329C	PRE8	P23639	250 aa		2.65	□□□□□ -1.99
SCD5	YOR329C	IMP2'	P32351	346 aa		2.65	□□□□□ -1.99
SCD5	YOR329C	PTC4	P38089	393 aa		2.65	□□□□□ -1.99
SCD5	YOR329C	MAL33	P38157	468 aa		2.65	□□□□□ -1.99
SCD5	YOR329C	VPS8	P39702	1274 aa		2.65	□□□□□ -1.99
SCD5	YOR329C	YPT11	P48559	417 aa		2.65	□□□□□ -1.99
SCD5	YOR329C	CTF18	P49956	741 aa		2.65	□□□□□ -1.99
SCD5	YOR329C	PIB2	P53191	635 aa		2.65	□□□□□ -1.99
SCD5	YOR329C	MYO5	Q04439	1219 aa	Known RBP	2.65	□□□□□ -1.99
SCD5	YOR329C	AIM7	Q12156	149 aa		2.65	□□□□□ -1.99
SCD5	YOR329C	TUS1	Q06412	1307 aa		2.65	□□□□□ -1.99
SCD5	YOR329C	FOB1	O13329	566 aa		2.64	□□□□□ -1.99
SCD5	YOR329C	TY1B-A	O13527	1196 aa	Known RBP	2.64	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms