RNA–Protein interactions for RNA: YOR329C

SCD5, Transcript of Protein required for normal actin organization and endocytosis, yeastyeast

Gene SCD5, Length 2,619 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCD5YOR329C FAP1P53971 965 aa5.46□□□□□ -1.53
SCD5YOR329C PRY3P47033 881 aa5.2□□□□□ -1.58
SCD5YOR329C YCK3P39962 524 aa4.99□□□□□ -1.61
SCD5YOR329C HAA1Q12753 694 aaKnown RBP4.82□□□□□ -1.64
SCD5YOR329C MON2P48563 1636 aaPredicted RBP4.81□□□□□ -1.64
SCD5YOR329C INO80P53115 1489 aa4.71□□□□□ -1.65
SCD5YOR329C MTC1P47018 478 aaKnown RBP4.7□□□□□ -1.66
SCD5YOR329C AAD16Q02895 342 aa4.7□□□□□ -1.66
SCD5YOR329C PRI1P10363 409 aa4.62□□□□□ -1.67
SCD5YOR329C DNA2P38859 1522 aa4.52□□□□□ -1.69
SCD5YOR329C SWR1Q05471 1514 aa4.48□□□□□ -1.69
SCD5YOR329C KOG1P38873 1557 aa4.46□□□□□ -1.7
SCD5YOR329C BUD31P25337 157 aaPredicted RBP4.43□□□□□ -1.7
SCD5YOR329C RSE1Q04693 1361 aaKnown RBP4.39□□□□□ -1.71
SCD5YOR329C TY1B-DR4Q07793 1604 aa4.39□□□□□ -1.71
SCD5YOR329C TCB3Q03640 1545 aaKnown RBP4.37□□□□□ -1.71
SCD5YOR329C TSR3Q12094 313 aaKnown RBP4.28□□□□□ -1.72
SCD5YOR329C YGL015CP33199 130 aa4.25□□□□□ -1.73
SCD5YOR329C SPA2P23201 1466 aaKnown RBP4.24□□□□□ -1.73
SCD5YOR329C SGS1P35187 1447 aa4.17□□□□□ -1.74
SCD5YOR329C HSL1P34244 1518 aa4.15□□□□□ -1.75
SCD5YOR329C THO2P53552 1597 aaKnown RBP4.14□□□□□ -1.75
SCD5YOR329C SPT6P23615 1451 aaKnown RBP4.14□□□□□ -1.75
SCD5YOR329C RPG1P38249 964 aaKnown RBP4.13□□□□□ -1.75
SCD5YOR329C ISW2Q08773 1120 aa4.11□□□□□ -1.75
SCD5YOR329C ECM5Q03214 1411 aa4.09□□□□□ -1.75
SCD5YOR329C MRPL32P25348 183 aa4.09□□□□□ -1.75
SCD5YOR329C BUD4P47136 1447 aa4.08□□□□□ -1.76
SCD5YOR329C MDS3P53094 1487 aa4.06□□□□□ -1.76
SCD5YOR329C SIS1P25294 352 aaKnown RBP4.06□□□□□ -1.76
SCD5YOR329C REV3P14284 1504 aa4.06□□□□□ -1.76
SCD5YOR329C HIR3P47171 1648 aa4.04□□□□□ -1.76
SCD5YOR329C PEP1P32319 1579 aa4.02□□□□□ -1.77
SCD5YOR329C BPT1P14772 1559 aa3.97□□□□□ -1.77
SCD5YOR329C SSN2P38931 1420 aa3.95□□□□□ -1.78
SCD5YOR329C ATG2P53855 1592 aa3.95□□□□□ -1.78
SCD5YOR329C MIF2P35201 549 aa3.94□□□□□ -1.78
SCD5YOR329C SSK2P53599 1579 aa3.92□□□□□ -1.78
SCD5YOR329C XRN1P22147 1528 aaKnown RBP3.9□□□□□ -1.78
SCD5YOR329C YCF1P39109 1515 aaKnown RBP3.9□□□□□ -1.78
SCD5YOR329C DRS1P32892 752 aaKnown RBP3.87□□□□□ -1.79
SCD5YOR329C SIN3P22579 1536 aa3.86□□□□□ -1.79
SCD5YOR329C MYO2P19524 1574 aaKnown RBP3.86□□□□□ -1.79
SCD5YOR329C MET5P47169 1442 aa3.84□□□□□ -1.79
SCD5YOR329C LTE1P07866 1435 aa3.83□□□□□ -1.8
SCD5YOR329C UBP9P39967 754 aa3.8□□□□□ -1.8
SCD5YOR329C CDC25P04821 1589 aa3.79□□□□□ -1.8
SCD5YOR329C BNI1P41832 1953 aa3.79□□□□□ -1.8
SCD5YOR329C TAF2P23255 1407 aa3.79□□□□□ -1.8
SCD5YOR329C SKI3P17883 1432 aaKnown RBP3.78□□□□□ -1.8
SCD5YOR329C RPA190P10964 1664 aaKnown RBP3.77□□□□□ -1.81
SCD5YOR329C RKR1Q04781 1562 aa3.76□□□□□ -1.81
SCD5YOR329C UFD4P33202 1483 aa3.76□□□□□ -1.81
SCD5YOR329C ESP1Q03018 1630 aa3.76□□□□□ -1.81
SCD5YOR329C ESC1Q03661 1658 aaKnown RBP3.76□□□□□ -1.81
SCD5YOR329C DNF1P32660 1571 aa3.76□□□□□ -1.81
SCD5YOR329C UBP10P53874 792 aaPredicted RBP3.75□□□□□ -1.81
SCD5YOR329C CHD1P32657 1468 aa3.75□□□□□ -1.81
SCD5YOR329C CDC27P38042 758 aa3.74□□□□□ -1.81
SCD5YOR329C MAP2P38174 421 aaKnown RBP3.74□□□□□ -1.81
SCD5YOR329C YFR006WP43590 535 aa3.74□□□□□ -1.81
SCD5YOR329C SCC2Q04002 1493 aa3.74□□□□□ -1.81
SCD5YOR329C RPO31P04051 1460 aa3.73□□□□□ -1.81
SCD5YOR329C YPK9Q12697 1472 aa3.73□□□□□ -1.81
SCD5YOR329C IRC20Q06554 1556 aa3.73□□□□□ -1.81
SCD5YOR329C TY1B-BRQ12193 1756 aa3.73□□□□□ -1.81
SCD5YOR329C TY1B-GR3Q12316 1755 aa3.73□□□□□ -1.81
SCD5YOR329C TY1B-ORQ92393 1755 aa3.73□□□□□ -1.81
SCD5YOR329C GEA2P39993 1459 aaKnown RBP3.73□□□□□ -1.81
SCD5YOR329C PAN1P32521 1480 aa3.71□□□□□ -1.82
SCD5YOR329C TY2B-LR1P0C2J3 1770 aa3.7□□□□□ -1.82
SCD5YOR329C TY2B-FP0CX63 1770 aa3.7□□□□□ -1.82
SCD5YOR329C TY2B-GR2P0CX64 1770 aa3.7□□□□□ -1.82
SCD5YOR329C TY2B-CP25384 1770 aa3.7□□□□□ -1.82
SCD5YOR329C TY2B-DR2Q03494 1770 aa3.7□□□□□ -1.82
SCD5YOR329C TY1B-DR1Q03855 1755 aa3.7□□□□□ -1.82
SCD5YOR329C TY2B-DR3Q07791 1770 aaKnown RBP3.7□□□□□ -1.82
SCD5YOR329C TY2B-OR1Q12113 1770 aa3.7□□□□□ -1.82
SCD5YOR329C TY2B-DR1Q12472 1770 aa3.7□□□□□ -1.82
SCD5YOR329C TY2B-OR2Q12501 1770 aa3.7□□□□□ -1.82
SCD5YOR329C MMS1Q06211 1407 aa3.69□□□□□ -1.82
SCD5YOR329C ITT1Q04638 464 aa3.68□□□□□ -1.82
SCD5YOR329C ABP1P15891 592 aaKnown RBP3.68□□□□□ -1.82
SCD5YOR329C TY1B-HO13535 1793 aa3.66□□□□□ -1.82
SCD5YOR329C TY1B-DR5P0C2I2 1755 aa3.66□□□□□ -1.82
SCD5YOR329C TY1B-DR6P0C2I3 1755 aa3.66□□□□□ -1.82
SCD5YOR329C TY1B-LR2P0C2I5 1755 aa3.66□□□□□ -1.82
SCD5YOR329C TY1B-LR3P0C2I6 1755 aaKnown RBP3.66□□□□□ -1.82
SCD5YOR329C TY1B-PR1P0C2I9 1755 aaKnown RBP3.66□□□□□ -1.82
SCD5YOR329C TY1B-PR2P0C2J0 1756 aa3.66□□□□□ -1.82
SCD5YOR329C TY1B-PR3P0C2J1 1755 aaKnown RBP3.66□□□□□ -1.82
SCD5YOR329C TY1B-JR1P47098 1755 aa3.66□□□□□ -1.82
SCD5YOR329C TY1B-ML2Q03434 1755 aaKnown RBP3.66□□□□□ -1.82
SCD5YOR329C TY1B-ER1Q03612 1755 aa3.66□□□□□ -1.82
SCD5YOR329C TY1B-ML1Q04711 1755 aaKnown RBP3.66□□□□□ -1.82
SCD5YOR329C TY1B-GR2Q12269 1755 aa3.66□□□□□ -1.82
SCD5YOR329C TY1B-OLQ12273 1755 aa3.66□□□□□ -1.82
SCD5YOR329C TY1B-PLQ12414 1755 aaKnown RBP3.66□□□□□ -1.82
SCD5YOR329C YTA7P40340 1379 aa3.65□□□□□ -1.83
SCD5YOR329C TY2B-BQ12491 1770 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms