RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C DLD1P32891 587 aa13.56□□□□□ -0.24
YKR040CYKR040C HXT13P39924 564 aa13.56□□□□□ -0.24
YKR040CYKR040C UBP9P39967 754 aa13.56□□□□□ -0.24
YKR040CYKR040C ATG1P53104 897 aa13.56□□□□□ -0.24
YKR040CYKR040C VMA2P16140 517 aaKnown RBP13.55□□□□□ -0.24
YKR040CYKR040C SDH2P21801 266 aa13.55□□□□□ -0.24
YKR040CYKR040C PTK2P47116 818 aaKnown RBP13.55□□□□□ -0.24
YKR040CYKR040C RPT6Q01939 405 aaKnown RBP13.55□□□□□ -0.24
YKR040CYKR040C VPS30Q02948 557 aa13.55□□□□□ -0.24
YKR040CYKR040C DIT2P21595 489 aa13.54□□□□□ -0.24
YKR040CYKR040C PEP3P27801 918 aa13.54□□□□□ -0.24
YKR040CYKR040C RPL8BP29453 256 aaKnown RBP13.54□□□□□ -0.24
YKR040CYKR040C ESF1Q06344 628 aaKnown RBP13.54□□□□□ -0.24
YKR040CYKR040C RAD18P10862 487 aa13.53□□□□□ -0.24
YKR040CYKR040C PKC1P24583 1151 aa13.53□□□□□ -0.24
YKR040CYKR040C VPS45P38932 577 aa13.53□□□□□ -0.24
YKR040CYKR040C NUC1P08466 329 aa13.52□□□□□ -0.25
YKR040CYKR040C MAK31P23059 88 aa13.52□□□□□ -0.25
YKR040CYKR040C MYO5Q04439 1219 aaKnown RBP13.52□□□□□ -0.25
YKR040CYKR040C EST2Q06163 884 aa13.52□□□□□ -0.25
YKR040CYKR040C CLF1Q12309 687 aaPredicted RBP13.52□□□□□ -0.25
YKR040CYKR040C EUG1P32474 517 aa13.51□□□□□ -0.25
YKR040CYKR040C GPB2P39717 880 aa13.51□□□□□ -0.25
YKR040CYKR040C YAF9P53930 226 aa13.51□□□□□ -0.25
YKR040CYKR040C TFC6Q06339 672 aa13.51□□□□□ -0.25
YKR040CYKR040C PSF2P40359 213 aa13.5□□□□□ -0.25
YKR040CYKR040C ALG2P43636 503 aa13.5□□□□□ -0.25
YKR040CYKR040C ALD6P54115 500 aaKnown RBP13.5□□□□□ -0.25
YKR040CYKR040C YKR018CP36114 725 aa13.49□□□□□ -0.25
YKR040CYKR040C CSM2P40465 213 aa13.49□□□□□ -0.25
YKR040CYKR040C KRI1P42846 591 aaKnown RBP13.49□□□□□ -0.25
YKR040CYKR040C CDC19P00549 500 aaKnown RBP13.47□□□□□ -0.25
YKR040CYKR040C SIS2P36024 562 aa13.47□□□□□ -0.25
YKR040CYKR040C PHO88P38264 188 aaPredicted RBP13.47□□□□□ -0.25
YKR040CYKR040C SPO22P40511 975 aa13.47□□□□□ -0.25
YKR040CYKR040C UTP4Q06679 776 aaKnown RBP13.47□□□□□ -0.25
YKR040CYKR040C SAM1P10659 382 aaKnown RBP13.46□□□□□ -0.25
YKR040CYKR040C UTR4P32626 227 aa13.46□□□□□ -0.25
YKR040CYKR040C ULP1Q02724 621 aa13.46□□□□□ -0.25
YKR040CYKR040C SUE1Q06524 206 aa13.46□□□□□ -0.25
YKR040CYKR040C RPC31P17890 251 aa13.45□□□□□ -0.26
YKR040CYKR040C PAM1P37304 830 aaKnown RBP13.45□□□□□ -0.26
YKR040CYKR040C AIM9P40053 627 aaKnown RBP13.45□□□□□ -0.26
YKR040CYKR040C LSB1P53281 241 aa13.45□□□□□ -0.26
YKR040CYKR040C MDM1Q01846 1127 aa13.45□□□□□ -0.26
YKR040CYKR040C SRP54P20424 541 aaKnown RBP13.44□□□□□ -0.26
YKR040CYKR040C PAH1P32567 862 aa13.44□□□□□ -0.26
YKR040CYKR040C TGL1P34163 548 aa13.44□□□□□ -0.26
YKR040CYKR040C MAL31P38156 614 aa13.44□□□□□ -0.26
YKR040CYKR040C MXR1P40029 184 aa13.44□□□□□ -0.26
YKR040CYKR040C TMA64Q04600 565 aaKnown RBP13.44□□□□□ -0.26
YKR040CYKR040C DUS4Q06063 367 aa13.44□□□□□ -0.26
YKR040CYKR040C CSC1Q06538 782 aa13.44□□□□□ -0.26
YKR040CYKR040C PIB1Q06651 286 aa13.44□□□□□ -0.26
YKR040CYKR040C SRP40P32583 406 aaPredicted RBP13.43□□□□□ -0.26
YKR040CYKR040C DSE3Q08729 430 aa13.43□□□□□ -0.26
YKR040CYKR040C YOR111WQ99210 232 aa13.43□□□□□ -0.26
YKR040CYKR040C TRL1P09880 827 aaKnown RBP13.42□□□□□ -0.26
YKR040CYKR040C PRE10P21242 288 aaKnown RBP RIP-Chip data13.42□□□□□ -0.26not detected
YKR040CYKR040C SEC20P28791 383 aa13.42□□□□□ -0.26
YKR040CYKR040C TOM71P38825 639 aaKnown RBP13.42□□□□□ -0.26
YKR040CYKR040C VID28P40547 921 aa13.42□□□□□ -0.26
YKR040CYKR040C YGR125WP53273 1036 aa13.42□□□□□ -0.26
YKR040CYKR040C BUL2Q03758 920 aaKnown RBP13.42□□□□□ -0.26
YKR040CYKR040C SPH1Q06160 661 aa13.42□□□□□ -0.26
YKR040CYKR040C MET7Q08645 548 aa13.42□□□□□ -0.26
YKR040CYKR040C ISW2Q08773 1120 aa13.42□□□□□ -0.26
YKR040CYKR040C ECM23Q02710 187 aa13.41□□□□□ -0.26
YKR040CYKR040C ICL2Q12031 575 aa13.41□□□□□ -0.26
YKR040CYKR040C ARP8Q12386 881 aaKnown RBP RIP-Chip data13.41□□□□□ -0.26not detected
YKR040CYKR040C RNR3P21672 869 aaKnown RBP13.4□□□□□ -0.26
YKR040CYKR040C AKR1P39010 764 aa13.4□□□□□ -0.26
YKR040CYKR040C ARP5P53946 755 aa13.4□□□□□ -0.26
YKR040CYKR040C FBP26P32604 452 aa13.39□□□□□ -0.27
YKR040CYKR040C RGT1P32862 1170 aa13.39□□□□□ -0.27
YKR040CYKR040C SHP1P34223 423 aa13.39□□□□□ -0.27
YKR040CYKR040C TPM2P40414 161 aa13.39□□□□□ -0.27
YKR040CYKR040C FMS1P50264 508 aa13.39□□□□□ -0.27
YKR040CYKR040C SLD5Q03406 294 aa13.39□□□□□ -0.27
YKR040CYKR040C RPL8AP17076 256 aaKnown RBP13.38□□□□□ -0.27
YKR040CYKR040C MCR1P36060 302 aaKnown RBP13.38□□□□□ -0.27
YKR040CYKR040C NDT80P38830 627 aa13.38□□□□□ -0.27
YKR040CYKR040C DUS3Q06053 668 aaKnown RBP13.38□□□□□ -0.27
YKR040CYKR040C PWP2P25635 923 aaKnown RBP13.37□□□□□ -0.27
YKR040CYKR040C MAC1P35192 417 aa13.37□□□□□ -0.27
YKR040CYKR040C VPS29P38759 282 aa13.37□□□□□ -0.27
YKR040CYKR040C YDR341CQ05506 607 aaKnown RBP13.37□□□□□ -0.27
YKR040CYKR040C VIP1Q06685 1146 aaKnown RBP13.37□□□□□ -0.27
YKR040CYKR040C RKM4Q12504 494 aa13.37□□□□□ -0.27
YKR040CYKR040C CIT1P00890 479 aa13.36□□□□□ -0.27
YKR040CYKR040C YKE2P52553 114 aa13.36□□□□□ -0.27
YKR040CYKR040C VPS62P53285 467 aa13.36□□□□□ -0.27
YKR040CYKR040C GUD1Q07729 489 aa13.36□□□□□ -0.27
YKR040CYKR040C MSC6Q08818 692 aaKnown RBP13.36□□□□□ -0.27
YKR040CYKR040C ERP3Q12403 225 aa13.36□□□□□ -0.27
YKR040CYKR040C YOR131CQ12486 218 aa13.36□□□□□ -0.27
YKR040CYKR040C OPY1P38271 328 aa13.35□□□□□ -0.27
YKR040CYKR040C EPL1P43572 832 aa13.35□□□□□ -0.27
YKR040CYKR040C ASE1P50275 885 aa13.35□□□□□ -0.27
YKR040CYKR040C LIF1P53150 421 aa13.35□□□□□ -0.27
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms