RNA–Protein interactions for RNA: YJR005W

APL1, Transcript of Beta-adaptin, yeastyeast

Gene APL1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APL1YJR005W TY1A-GR1Q12085 440 aa2.31□□□□□ -2.04
APL1YJR005W TY1A-PR3Q6Q5H1 440 aaKnown RBP2.31□□□□□ -2.04
APL1YJR005W TY1A-OLQ92392 440 aaKnown RBP2.31□□□□□ -2.04
APL1YJR005W FLP1P03870 423 aa2.3□□□□□ -2.04
APL1YJR005W PRP5P21372 849 aaPredicted RBP2.3□□□□□ -2.04
APL1YJR005W WHI3P34761 661 aaKnown RBP2.3□□□□□ -2.04
APL1YJR005W ECM2P38241 364 aaKnown RBP2.3□□□□□ -2.04
APL1YJR005W MSH6Q03834 1242 aa2.3□□□□□ -2.04
APL1YJR005W DOT1Q04089 582 aaKnown RBP2.3□□□□□ -2.04
APL1YJR005W YIG1Q08956 461 aa2.3□□□□□ -2.04
APL1YJR005W YOR223WQ12015 292 aa2.3□□□□□ -2.04
APL1YJR005W NUT1P53114 1132 aa2.3□□□□□ -2.04
APL1YJR005W FAR11P53917 953 aa2.3□□□□□ -2.04
APL1YJR005W EAR1Q03212 550 aa2.3□□□□□ -2.04
APL1YJR005W UGA4P32837 571 aa2.29□□□□□ -2.04
APL1YJR005W SAP155P43612 1002 aa2.29□□□□□ -2.04
APL1YJR005W MSB1P21339 1137 aaKnown RBP2.29□□□□□ -2.04
APL1YJR005W MCM5P29496 775 aaKnown RBP2.29□□□□□ -2.04
APL1YJR005W LRG1P35688 1017 aa2.29□□□□□ -2.04
APL1YJR005W GCV1P48015 400 aa2.29□□□□□ -2.04
APL1YJR005W YAF9P53930 226 aa2.29□□□□□ -2.04
APL1YJR005W TOS4Q06266 489 aa2.29□□□□□ -2.04
APL1YJR005W YHL050CP38721 697 aa2.28□□□□□ -2.04
APL1YJR005W YHR219WP38900 624 aa2.28□□□□□ -2.04
APL1YJR005W MSH4P40965 878 aaPredicted RBP2.28□□□□□ -2.04
APL1YJR005W MMM1P41800 426 aa2.28□□□□□ -2.04
APL1YJR005W UTP22P53254 1237 aaPredicted RBP2.28□□□□□ -2.04
APL1YJR005W REI1P38344 393 aaPredicted RBP2.27□□□□□ -2.05
APL1YJR005W NMD3P38861 518 aaKnown RBP2.27□□□□□ -2.05
APL1YJR005W ELA1P53861 379 aaPredicted RBP2.27□□□□□ -2.05
APL1YJR005W MEC3Q02574 474 aa2.27□□□□□ -2.05
APL1YJR005W NOC3Q07896 663 aaPredicted RBP2.27□□□□□ -2.05
APL1YJR005W RPS4AP0CX35 261 aaKnown RBP2.27□□□□□ -2.05
APL1YJR005W RPS4BP0CX36 261 aaKnown RBP2.27□□□□□ -2.05
APL1YJR005W RNQ1P25367 405 aa2.27□□□□□ -2.05
APL1YJR005W SEG2P34250 1132 aa2.27□□□□□ -2.05
APL1YJR005W OYE3P41816 400 aaPredicted RBP2.27□□□□□ -2.05
APL1YJR005W SLS1P42900 643 aa2.27□□□□□ -2.05
APL1YJR005W CIT3P43635 486 aa2.27□□□□□ -2.05
APL1YJR005W YGR045CP53229 120 aa2.27□□□□□ -2.05
APL1YJR005W AOS1Q06624 347 aa2.27□□□□□ -2.05
APL1YJR005W PMT7Q06644 662 aa2.27□□□□□ -2.05
APL1YJR005W MET4P32389 672 aa2.26□□□□□ -2.05
APL1YJR005W POL12P38121 705 aaPredicted RBP2.26□□□□□ -2.05
APL1YJR005W EXO5P38289 585 aa2.26□□□□□ -2.05
APL1YJR005W NEM1P38757 446 aa2.26□□□□□ -2.05
APL1YJR005W ALT1P52893 592 aa2.26□□□□□ -2.05
APL1YJR005W RCM1P53972 490 aa2.26□□□□□ -2.05
APL1YJR005W WHI5Q12416 295 aa2.26□□□□□ -2.05
APL1YJR005W SSF1P38789 453 aaPredicted RBP2.26□□□□□ -2.05
APL1YJR005W PHO4P07270 312 aaKnown RBP2.25□□□□□ -2.05
APL1YJR005W RVS167P39743 482 aaKnown RBP2.25□□□□□ -2.05
APL1YJR005W DAK2P43550 591 aa2.25□□□□□ -2.05
APL1YJR005W SAM37P50110 327 aa2.25□□□□□ -2.05
APL1YJR005W YLL054CQ12244 843 aa2.25□□□□□ -2.05
APL1YJR005W YVC1Q12324 675 aa2.25□□□□□ -2.05
APL1YJR005W MSH3P25336 1018 aa2.24□□□□□ -2.05
APL1YJR005W NFS1P25374 497 aa2.24□□□□□ -2.05
APL1YJR005W HSP78P33416 811 aa2.24□□□□□ -2.05
APL1YJR005W PEX13P80667 386 aa2.24□□□□□ -2.05
APL1YJR005W SSY1Q03770 852 aa2.24□□□□□ -2.05
APL1YJR005W DAL4Q04895 635 aa2.24□□□□□ -2.05
APL1YJR005W YCS4Q06156 1176 aa2.24□□□□□ -2.05
APL1YJR005W DFG16Q99234 619 aa2.24□□□□□ -2.05
APL1YJR005W HEM13P11353 328 aaKnown RBP2.24□□□□□ -2.05
APL1YJR005W ELM1P32801 640 aa2.24□□□□□ -2.05
APL1YJR005W SMY2P32909 740 aaKnown RBP2.24□□□□□ -2.05
APL1YJR005W PRP40P33203 583 aaKnown RBP2.24□□□□□ -2.05
APL1YJR005W PEX7P39108 375 aa2.24□□□□□ -2.05
APL1YJR005W AVO1Q08236 1176 aa2.24□□□□□ -2.05
APL1YJR005W YKL077WP36081 392 aa2.23□□□□□ -2.05
APL1YJR005W CIC1P38779 376 aaKnown RBP2.23□□□□□ -2.05
APL1YJR005W FAA3P39002 694 aa2.23□□□□□ -2.05
APL1YJR005W YNR063WP53749 607 aa2.23□□□□□ -2.05
APL1YJR005W ULP1Q02724 621 aa2.23□□□□□ -2.05
APL1YJR005W NOG1Q02892 647 aaKnown RBP2.23□□□□□ -2.05
APL1YJR005W TRE1Q08919 783 aa2.23□□□□□ -2.05
APL1YJR005W GAS1P22146 559 aaKnown RBP2.23□□□□□ -2.05
APL1YJR005W PRO1P32264 428 aa2.23□□□□□ -2.05
APL1YJR005W IPL1P38991 367 aa2.23□□□□□ -2.05
APL1YJR005W RSM26P47141 266 aa2.23□□□□□ -2.05
APL1YJR005W TPP1Q03796 238 aa2.23□□□□□ -2.05
APL1YJR005W UTP5Q04177 643 aaKnown RBP2.23□□□□□ -2.05
APL1YJR005W YOR059CQ08448 450 aaKnown RBP2.23□□□□□ -2.05
APL1YJR005W PUS7Q08647 676 aaKnown RBP2.23□□□□□ -2.05
APL1YJR005W LPX1Q12405 387 aaKnown RBP2.23□□□□□ -2.05
APL1YJR005W NNK1P36003 928 aa2.22□□□□□ -2.05
APL1YJR005W PPX1P38698 397 aa2.22□□□□□ -2.05
APL1YJR005W PTC7P38797 343 aa2.22□□□□□ -2.05
APL1YJR005W YAR028WP39548 234 aa2.22□□□□□ -2.05
APL1YJR005W GTS1P40956 396 aa2.22□□□□□ -2.05
APL1YJR005W XKS1P42826 600 aa2.22□□□□□ -2.05
APL1YJR005W THI12P42883 340 aa2.22□□□□□ -2.05
APL1YJR005W THI5P43534 340 aa2.22□□□□□ -2.05
APL1YJR005W THI11P47183 340 aa2.22□□□□□ -2.05
APL1YJR005W THI13Q07748 340 aa2.22□□□□□ -2.05
APL1YJR005W MSC6Q08818 692 aaKnown RBP2.22□□□□□ -2.05
APL1YJR005W RET1P22276 1149 aaKnown RBP2.21□□□□□ -2.06
APL1YJR005W ADP1P25371 1049 aa2.21□□□□□ -2.06
APL1YJR005W RPT1P33299 467 aaKnown RBP2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms