RNA–Protein interactions for RNA: YJL208C

NUC1, Transcript of Major mitochondrial nuclease, yeast

Gene NUC1, Length 990 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUC1	YJL208C	IME2	P32581	645 aa		10.48	□□□□□ -0.73
NUC1	YJL208C	BUD6	P41697	788 aa		10.48	□□□□□ -0.73
NUC1	YJL208C	NPA3	P47122	385 aa		10.48	□□□□□ -0.73
NUC1	YJL208C	MYO5	Q04439	1219 aa	Known RBP	10.48	□□□□□ -0.73
NUC1	YJL208C	TYW1	Q08960	810 aa	Known RBP	10.48	□□□□□ -0.73
NUC1	YJL208C	ELG1	Q12050	791 aa		10.48	□□□□□ -0.73
NUC1	YJL208C	TUS1	Q06412	1307 aa		10.48	□□□□□ -0.73
NUC1	YJL208C	BIK1	P11709	440 aa		10.47	□□□□□ -0.73
NUC1	YJL208C	CBP3	P21560	335 aa		10.47	□□□□□ -0.73
NUC1	YJL208C	RNR3	P21672	869 aa	Known RBP	10.47	□□□□□ -0.73
NUC1	YJL208C	ASF1	P32447	279 aa		10.47	□□□□□ -0.73
NUC1	YJL208C	BMH2	P34730	273 aa	Known RBP	10.47	□□□□□ -0.73
NUC1	YJL208C	CTF18	P49956	741 aa		10.47	□□□□□ -0.73
NUC1	YJL208C	RRT6	P53117	311 aa	Predicted RBP	10.47	□□□□□ -0.73
NUC1	YJL208C	FAR11	P53917	953 aa		10.47	□□□□□ -0.73
NUC1	YJL208C	YLR407W	Q06070	228 aa		10.47	□□□□□ -0.73
NUC1	YJL208C	RPL8B	P29453	256 aa	Known RBP	10.46	□□□□□ -0.73
NUC1	YJL208C	PRO3	P32263	286 aa	Known RBP	10.46	□□□□□ -0.73
NUC1	YJL208C	KEL1	P38853	1164 aa	Known RBP	10.46	□□□□□ -0.73
NUC1	YJL208C	VHR2	P40041	505 aa		10.46	□□□□□ -0.73
NUC1	YJL208C	EAF7	P53911	425 aa	Known RBP	10.46	□□□□□ -0.73
NUC1	YJL208C	YPL150W	Q12152	901 aa		10.46	□□□□□ -0.73
NUC1	YJL208C	TOM71	P38825	639 aa	Known RBP	10.45	□□□□□ -0.74
NUC1	YJL208C	HYR1	P40581	163 aa	Known RBP	10.45	□□□□□ -0.74
NUC1	YJL208C	HST1	P53685	503 aa		10.45	□□□□□ -0.74
NUC1	YJL208C	GDE1	Q02979	1223 aa		10.45	□□□□□ -0.74
NUC1	YJL208C	SUB2	Q07478	446 aa	Known RBP	10.45	□□□□□ -0.74
NUC1	YJL208C	TUB2	P02557	457 aa	Known RBP	10.44	□□□□□ -0.74
NUC1	YJL208C	DIT2	P21595	489 aa		10.44	□□□□□ -0.74
NUC1	YJL208C	SSP1	P38871	571 aa		10.44	□□□□□ -0.74
NUC1	YJL208C	BDH2	P39713	417 aa		10.44	□□□□□ -0.74
NUC1	YJL208C	PTK2	P47116	818 aa	Known RBP	10.44	□□□□□ -0.74
NUC1	YJL208C	FOL1	P53848	824 aa		10.44	□□□□□ -0.74
NUC1	YJL208C	HDA1	P53973	706 aa		10.44	□□□□□ -0.74
NUC1	YJL208C	VPS30	Q02948	557 aa		10.44	□□□□□ -0.74
NUC1	YJL208C	MYO1	P08964	1928 aa		10.43	□□□□□ -0.74
NUC1	YJL208C	ERG12	P07277	443 aa		10.43	□□□□□ -0.74
NUC1	YJL208C	CHS3	P29465	1165 aa		10.43	□□□□□ -0.74
NUC1	YJL208C	PRX1	P34227	261 aa	Known RBP	10.43	□□□□□ -0.74
NUC1	YJL208C	AKR1	P39010	764 aa		10.43	□□□□□ -0.74
NUC1	YJL208C	CSM2	P40465	213 aa		10.43	□□□□□ -0.74
NUC1	YJL208C	HRQ1	Q05549	1077 aa		10.43	□□□□□ -0.74
NUC1	YJL208C	YOR111W	Q99210	232 aa		10.43	□□□□□ -0.74
NUC1	YJL208C	CPA2	P03965	1118 aa	Known RBP	10.42	□□□□□ -0.74
NUC1	YJL208C	PGI1	P12709	554 aa	Known RBP	10.42	□□□□□ -0.74
NUC1	YJL208C	SSA4	P22202	642 aa	Known RBP	10.42	□□□□□ -0.74
NUC1	YJL208C	TIF4631	P39935	952 aa	Known RBP	10.42	□□□□□ -0.74
NUC1	YJL208C	SOL4	P53315	255 aa		10.42	□□□□□ -0.74
NUC1	YJL208C	LAP2	Q10740	671 aa		10.42	□□□□□ -0.74
NUC1	YJL208C	GIN4	Q12263	1142 aa		10.42	□□□□□ -0.74
NUC1	YJL208C	CEX1	Q12453	761 aa		10.42	□□□□□ -0.74
NUC1	YJL208C	NUC1	P08466	329 aa		10.41	□□□□□ -0.74
NUC1	YJL208C	RXT2	P38255	430 aa		10.41	□□□□□ -0.74
NUC1	YJL208C	VPS45	P38932	577 aa		10.41	□□□□□ -0.74
NUC1	YJL208C	YIL089W	P40500	205 aa		10.41	□□□□□ -0.74
NUC1	YJL208C	EPL1	P43572	832 aa		10.41	□□□□□ -0.74
NUC1	YJL208C	LSB1	P53281	241 aa		10.41	□□□□□ -0.74
NUC1	YJL208C	COG8	Q04632	607 aa		10.41	□□□□□ -0.74
NUC1	YJL208C	SWI4	P25302	1093 aa	Known RBP	10.4	□□□□□ -0.74
NUC1	YJL208C	RPN10	P38886	268 aa	Known RBP	10.4	□□□□□ -0.74
NUC1	YJL208C	ACA1	P39970	489 aa		10.4	□□□□□ -0.74
NUC1	YJL208C	NAF1	P53919	492 aa	Known RBP	10.4	□□□□□ -0.74
NUC1	YJL208C	YDR341C	Q05506	607 aa	Known RBP	10.4	□□□□□ -0.74
NUC1	YJL208C	DSE3	Q08729	430 aa		10.4	□□□□□ -0.74
NUC1	YJL208C	CIT1	P00890	479 aa		10.39	□□□□□ -0.75
NUC1	YJL208C	KEX1	P09620	729 aa		10.39	□□□□□ -0.75
NUC1	YJL208C	OCT1	P35999	772 aa		10.39	□□□□□ -0.75
NUC1	YJL208C	RFC5	P38251	354 aa		10.39	□□□□□ -0.75
NUC1	YJL208C	UBP9	P39967	754 aa		10.39	□□□□□ -0.75
NUC1	YJL208C	TPM2	P40414	161 aa		10.39	□□□□□ -0.75
NUC1	YJL208C	MDM1	Q01846	1127 aa		10.39	□□□□□ -0.75
NUC1	YJL208C	HAP5	Q02516	242 aa		10.39	□□□□□ -0.75
NUC1	YJL208C	AIM44	Q99299	758 aa		10.39	□□□□□ -0.75
NUC1	YJL208C	SRP54	P20424	541 aa	Known RBP	10.38	□□□□□ -0.75
NUC1	YJL208C	MSP1	P28737	362 aa		10.38	□□□□□ -0.75
NUC1	YJL208C	CCT3	P39077	534 aa	Known RBP	10.38	□□□□□ -0.75
NUC1	YJL208C	HCA4	P20448	770 aa	Known RBP	10.37	□□□□□ -0.75
NUC1	YJL208C	PER1	P25625	357 aa		10.37	□□□□□ -0.75
NUC1	YJL208C	SPB4	P25808	606 aa	Predicted RBP	10.37	□□□□□ -0.75
NUC1	YJL208C	BSD2	P38356	321 aa		10.37	□□□□□ -0.75
NUC1	YJL208C	VAB2	P40003	282 aa		10.37	□□□□□ -0.75
NUC1	YJL208C	TGL3	P40308	642 aa		10.37	□□□□□ -0.75
NUC1	YJL208C	LYS14	P40971	790 aa		10.37	□□□□□ -0.75
NUC1	YJL208C	ENT3	P47160	408 aa		10.37	□□□□□ -0.75
NUC1	YJL208C	ETT1	Q08421	412 aa	Known RBP	10.37	□□□□□ -0.75
NUC1	YJL208C	HSP82	P02829	709 aa	Known RBP	10.36	□□□□□ -0.75
NUC1	YJL208C	MAK11	P20484	414 aa	Known RBP	10.36	□□□□□ -0.75
NUC1	YJL208C	ACE2	P21192	770 aa		10.36	□□□□□ -0.75
NUC1	YJL208C	ELM1	P32801	640 aa		10.36	□□□□□ -0.75
NUC1	YJL208C	SAS3	P34218	831 aa		10.36	□□□□□ -0.75
NUC1	YJL208C	MAL33	P38157	468 aa		10.36	□□□□□ -0.75
NUC1	YJL208C	PCI8	P40512	444 aa		10.36	□□□□□ -0.75
NUC1	YJL208C	YGL138C	P53122	345 aa		10.36	□□□□□ -0.75
NUC1	YJL208C	PIL1	P53252	339 aa	Known RBP	10.36	□□□□□ -0.75
NUC1	YJL208C	VIP1	Q06685	1146 aa	Known RBP	10.36	□□□□□ -0.75
NUC1	YJL208C	PEX19	Q07418	342 aa		10.36	□□□□□ -0.75
NUC1	YJL208C	MET6	P05694	767 aa	Known RBP	10.35	□□□□□ -0.75
NUC1	YJL208C	RPL8A	P17076	256 aa	Known RBP	10.35	□□□□□ -0.75
NUC1	YJL208C	SAM2	P19358	384 aa	Known RBP	10.35	□□□□□ -0.75
NUC1	YJL208C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	10.35	□□□□□ -0.75	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms