RNA–Protein interactions for RNA: YJL208C

NUC1, Transcript of Major mitochondrial nuclease, yeastyeast

Gene NUC1, Length 990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUC1YJL208C SGS1P35187 1447 aa16.95■□□□□ 0.3
NUC1YJL208C INO80P53115 1489 aa16.9■□□□□ 0.3
NUC1YJL208C MON2P48563 1636 aaPredicted RBP16.87■□□□□ 0.29
NUC1YJL208C TCB3Q03640 1545 aaKnown RBP16.78■□□□□ 0.28
NUC1YJL208C TY1B-DR4Q07793 1604 aa16.59■□□□□ 0.25
NUC1YJL208C SWR1Q05471 1514 aa16.34■□□□□ 0.21
NUC1YJL208C HSL1P34244 1518 aa16.16■□□□□ 0.18
NUC1YJL208C SPT6P23615 1451 aaKnown RBP16.12■□□□□ 0.17
NUC1YJL208C SPA2P23201 1466 aaKnown RBP16.08■□□□□ 0.16
NUC1YJL208C SSN2P38931 1420 aa16.01■□□□□ 0.15
NUC1YJL208C KOG1P38873 1557 aa15.97■□□□□ 0.15
NUC1YJL208C DNA2P38859 1522 aa15.96■□□□□ 0.15
NUC1YJL208C HIR3P47171 1648 aa15.85■□□□□ 0.13
NUC1YJL208C MTC1P47018 478 aaKnown RBP15.69■□□□□ 0.1
NUC1YJL208C XRN1P22147 1528 aaKnown RBP15.63■□□□□ 0.09
NUC1YJL208C THO2P53552 1597 aaKnown RBP15.53■□□□□ 0.08
NUC1YJL208C BUD4P47136 1447 aa15.46■□□□□ 0.07
NUC1YJL208C DRS1P32892 752 aaKnown RBP15.46■□□□□ 0.07
NUC1YJL208C REV3P14284 1504 aa15.45■□□□□ 0.06
NUC1YJL208C SIN3P22579 1536 aa15.4■□□□□ 0.06
NUC1YJL208C ECM5Q03214 1411 aa15.36■□□□□ 0.05
NUC1YJL208C SSK2P53599 1579 aa15.25■□□□□ 0.03
NUC1YJL208C ATG2P53855 1592 aa15.22■□□□□ 0.03
NUC1YJL208C MDS3P53094 1487 aa15.21■□□□□ 0.03
NUC1YJL208C PEP1P32319 1579 aa15.16■□□□□ 0.02
NUC1YJL208C ESP1Q03018 1630 aa15.13■□□□□ 0.01
NUC1YJL208C MYO2P19524 1574 aaKnown RBP15.09■□□□□ 0.01
NUC1YJL208C TAF2P23255 1407 aa15.09■□□□□ 0.01
NUC1YJL208C SKI3P17883 1432 aaKnown RBP15□□□□□ -0.01
NUC1YJL208C YPK9Q12697 1472 aa14.94□□□□□ -0.02
NUC1YJL208C RSE1Q04693 1361 aaKnown RBP14.92□□□□□ -0.02
NUC1YJL208C SCC2Q04002 1493 aa14.8□□□□□ -0.04
NUC1YJL208C BPT1P14772 1559 aa14.76□□□□□ -0.05
NUC1YJL208C RPO31P04051 1460 aa14.75□□□□□ -0.05
NUC1YJL208C POL1P13382 1468 aa14.73□□□□□ -0.05
NUC1YJL208C UFD4P33202 1483 aa14.71□□□□□ -0.05
NUC1YJL208C YCF1P39109 1515 aaKnown RBP14.61□□□□□ -0.07
NUC1YJL208C RKR1Q04781 1562 aa14.6□□□□□ -0.07
NUC1YJL208C TOP2P06786 1428 aaKnown RBP14.6□□□□□ -0.07
NUC1YJL208C TY2B-LR1P0C2J3 1770 aa14.57□□□□□ -0.08
NUC1YJL208C TY2B-FP0CX63 1770 aa14.57□□□□□ -0.08
NUC1YJL208C TY2B-GR2P0CX64 1770 aa14.57□□□□□ -0.08
NUC1YJL208C TY2B-CP25384 1770 aa14.57□□□□□ -0.08
NUC1YJL208C TY2B-DR2Q03494 1770 aa14.57□□□□□ -0.08
NUC1YJL208C TY1B-DR1Q03855 1755 aa14.57□□□□□ -0.08
NUC1YJL208C TY2B-DR3Q07791 1770 aaKnown RBP14.57□□□□□ -0.08
NUC1YJL208C TY2B-OR1Q12113 1770 aa14.57□□□□□ -0.08
NUC1YJL208C TY2B-DR1Q12472 1770 aa14.57□□□□□ -0.08
NUC1YJL208C TY2B-OR2Q12501 1770 aa14.57□□□□□ -0.08
NUC1YJL208C STU1P38198 1513 aa14.56□□□□□ -0.08
NUC1YJL208C YOR1P53049 1477 aa14.53□□□□□ -0.08
NUC1YJL208C SMC4Q12267 1418 aa14.49□□□□□ -0.09
NUC1YJL208C YTA7P40340 1379 aa14.45□□□□□ -0.1
NUC1YJL208C TY1B-DR3Q99231 1755 aa14.45□□□□□ -0.1
NUC1YJL208C TY2B-BQ12491 1770 aa14.44□□□□□ -0.1
NUC1YJL208C CDC25P04821 1589 aa14.43□□□□□ -0.1
NUC1YJL208C TY1B-BRQ12193 1756 aa14.42□□□□□ -0.1
NUC1YJL208C TY1B-GR3Q12316 1755 aa14.42□□□□□ -0.1
NUC1YJL208C TY1B-ORQ92393 1755 aa14.42□□□□□ -0.1
NUC1YJL208C CHD1P32657 1468 aa14.41□□□□□ -0.1
NUC1YJL208C MYO4P32492 1471 aa14.39□□□□□ -0.11
NUC1YJL208C TY1B-HO13535 1793 aa14.37□□□□□ -0.11
NUC1YJL208C TY1B-DR5P0C2I2 1755 aa14.37□□□□□ -0.11
NUC1YJL208C TY1B-DR6P0C2I3 1755 aa14.37□□□□□ -0.11
NUC1YJL208C TY1B-LR2P0C2I5 1755 aa14.37□□□□□ -0.11
NUC1YJL208C TY1B-LR3P0C2I6 1755 aaKnown RBP14.37□□□□□ -0.11
NUC1YJL208C TY1B-PR1P0C2I9 1755 aaKnown RBP14.37□□□□□ -0.11
NUC1YJL208C TY1B-PR2P0C2J0 1756 aa14.37□□□□□ -0.11
NUC1YJL208C TY1B-PR3P0C2J1 1755 aaKnown RBP14.37□□□□□ -0.11
NUC1YJL208C TY1B-JR1P47098 1755 aa14.37□□□□□ -0.11
NUC1YJL208C TY1B-ML2Q03434 1755 aaKnown RBP14.37□□□□□ -0.11
NUC1YJL208C TY1B-ER1Q03612 1755 aa14.37□□□□□ -0.11
NUC1YJL208C TY1B-ML1Q04711 1755 aaKnown RBP14.37□□□□□ -0.11
NUC1YJL208C TY1B-GR2Q12269 1755 aa14.37□□□□□ -0.11
NUC1YJL208C TY1B-OLQ12273 1755 aa14.37□□□□□ -0.11
NUC1YJL208C TY1B-PLQ12414 1755 aaKnown RBP14.37□□□□□ -0.11
NUC1YJL208C PAN1P32521 1480 aa14.32□□□□□ -0.12
NUC1YJL208C MMS22Q06164 1454 aa14.31□□□□□ -0.12
NUC1YJL208C ESC1Q03661 1658 aaKnown RBP14.29□□□□□ -0.12
NUC1YJL208C SPP41P38904 1435 aa14.26□□□□□ -0.13
NUC1YJL208C RQC2Q12532 1038 aaKnown RBP14.22□□□□□ -0.13
NUC1YJL208C DNF1P32660 1571 aa14.18□□□□□ -0.14
NUC1YJL208C RPA190P10964 1664 aaKnown RBP14.18□□□□□ -0.14
NUC1YJL208C VTH1P40438 1549 aa14.17□□□□□ -0.14
NUC1YJL208C VTH2P40890 1549 aa14.17□□□□□ -0.14
NUC1YJL208C TSC11P40061 1430 aa14.16□□□□□ -0.14
NUC1YJL208C TRM732Q03496 1420 aa14.15□□□□□ -0.14
NUC1YJL208C TY1B-JR2P47100 1755 aaKnown RBP14.11□□□□□ -0.15
NUC1YJL208C TY1B-ER2Q03619 1755 aa14.11□□□□□ -0.15
NUC1YJL208C TY1B-MR1Q04214 1755 aa14.11□□□□□ -0.15
NUC1YJL208C TY1B-MR2Q04670 1755 aaKnown RBP14.11□□□□□ -0.15
NUC1YJL208C TY1B-LR1Q12088 1755 aaKnown RBP14.11□□□□□ -0.15
NUC1YJL208C TY1B-NL1Q12112 1755 aa14.11□□□□□ -0.15
NUC1YJL208C TY1B-GR1Q12141 1755 aa14.11□□□□□ -0.15
NUC1YJL208C TY1B-BLQ12490 1755 aa14.11□□□□□ -0.15
NUC1YJL208C MET5P47169 1442 aa14.1□□□□□ -0.15
NUC1YJL208C SNQ2P32568 1501 aaKnown RBP14.09□□□□□ -0.15
NUC1YJL208C NTE1Q04958 1679 aa14.07□□□□□ -0.16
NUC1YJL208C STH1P32597 1359 aa14.05□□□□□ -0.16
NUC1YJL208C MLP2P40457 1679 aa14.04□□□□□ -0.16
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms