RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C CTT1P06115 562 aa8.7□□□□□ -1.02
SNP1YIL061C RIT1P23796 513 aa8.7□□□□□ -1.02
SNP1YIL061C RXT2P38255 430 aa8.7□□□□□ -1.02
SNP1YIL061C VID27P40157 782 aa8.7□□□□□ -1.02
SNP1YIL061C CSM2P40465 213 aa8.7□□□□□ -1.02
SNP1YIL061C EAF6P47128 113 aa8.7□□□□□ -1.02
SNP1YIL061C PUS6P53294 404 aa8.7□□□□□ -1.02
SNP1YIL061C GET3Q12154 354 aaKnown RBP8.7□□□□□ -1.02
SNP1YIL061C YOR111WQ99210 232 aa8.7□□□□□ -1.02
SNP1YIL061C HXK1P04806 485 aaKnown RBP8.69□□□□□ -1.02
SNP1YIL061C VPS1P21576 704 aaKnown RBP8.69□□□□□ -1.02
SNP1YIL061C MCM3P24279 971 aaKnown RBP8.69□□□□□ -1.02
SNP1YIL061C MCM4P30665 933 aaKnown RBP8.69□□□□□ -1.02
SNP1YIL061C PRO3P32263 286 aaKnown RBP8.69□□□□□ -1.02
SNP1YIL061C YKU70P32807 602 aa8.69□□□□□ -1.02
SNP1YIL061C RRM3P38766 723 aa8.69□□□□□ -1.02
SNP1YIL061C TIF4632P39936 914 aaKnown RBP8.69□□□□□ -1.02
SNP1YIL061C PCI8P40512 444 aa8.69□□□□□ -1.02
SNP1YIL061C GSM1P42950 618 aa8.69□□□□□ -1.02
SNP1YIL061C CUE3P53137 624 aaKnown RBP8.69□□□□□ -1.02
SNP1YIL061C GDE1Q02979 1223 aa8.69□□□□□ -1.02
SNP1YIL061C ACK1Q07622 623 aaPredicted RBP8.69□□□□□ -1.02
SNP1YIL061C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.69□□□□□ -1.02not detected
SNP1YIL061C RGP1P16664 663 aa8.68□□□□□ -1.02
SNP1YIL061C URA1P28272 314 aaPredicted RBP8.68□□□□□ -1.02
SNP1YIL061C RPT6Q01939 405 aaKnown RBP8.68□□□□□ -1.02
SNP1YIL061C DPL1Q05567 589 aa8.68□□□□□ -1.02
SNP1YIL061C CEX1Q12453 761 aa8.68□□□□□ -1.02
SNP1YIL061C FLO11P08640 1367 aa8.67□□□□□ -1.02
SNP1YIL061C RPS7AP26786 190 aaKnown RBP8.67□□□□□ -1.02
SNP1YIL061C GSY2P27472 705 aa8.67□□□□□ -1.02
SNP1YIL061C ICL1P28240 557 aaPredicted RBP8.67□□□□□ -1.02
SNP1YIL061C SRP40P32583 406 aaPredicted RBP8.67□□□□□ -1.02
SNP1YIL061C EBP2P36049 427 aaKnown RBP8.67□□□□□ -1.02
SNP1YIL061C CTR9P89105 1077 aa8.67□□□□□ -1.02
SNP1YIL061C KEL3Q08979 651 aaPredicted RBP8.67□□□□□ -1.02
SNP1YIL061C RRG1Q12167 365 aaPredicted RBP8.67□□□□□ -1.02
SNP1YIL061C MET6P05694 767 aaKnown RBP8.66□□□□□ -1.02
SNP1YIL061C SPT21P35209 758 aa8.66□□□□□ -1.02
SNP1YIL061C YGL138CP53122 345 aa8.66□□□□□ -1.02
SNP1YIL061C NAF1P53919 492 aaKnown RBP8.66□□□□□ -1.02
SNP1YIL061C CLF1Q12309 687 aaPredicted RBP8.66□□□□□ -1.02
SNP1YIL061C RPS9BP05755 195 aaKnown RBP8.65□□□□□ -1.02
SNP1YIL061C SRP54P20424 541 aaKnown RBP8.65□□□□□ -1.02
SNP1YIL061C BMH1P29311 267 aaKnown RBP8.65□□□□□ -1.02
SNP1YIL061C VPS8P39702 1274 aa8.65□□□□□ -1.02
SNP1YIL061C FYV10P40492 516 aa8.65□□□□□ -1.02
SNP1YIL061C YJL171CP46992 396 aa8.65□□□□□ -1.02
SNP1YIL061C VMS1Q04311 632 aaKnown RBP8.65□□□□□ -1.02
SNP1YIL061C YDR341CQ05506 607 aaKnown RBP8.65□□□□□ -1.02
SNP1YIL061C PCL8Q08966 492 aa8.65□□□□□ -1.02
SNP1YIL061C PTC5Q12511 572 aa8.65□□□□□ -1.02
SNP1YIL061C PRE8P23639 250 aa8.64□□□□□ -1.03
SNP1YIL061C TOM71P38825 639 aaKnown RBP8.64□□□□□ -1.03
SNP1YIL061C SHC1P39000 512 aa8.64□□□□□ -1.03
SNP1YIL061C PES4P39684 611 aa8.64□□□□□ -1.03
SNP1YIL061C SKG3Q06315 1026 aa8.64□□□□□ -1.03
SNP1YIL061C MMR1Q06324 491 aa8.64□□□□□ -1.03
SNP1YIL061C CSC1Q06538 782 aa8.64□□□□□ -1.03
SNP1YIL061C SES1P07284 462 aaKnown RBP8.63□□□□□ -1.03
SNP1YIL061C CYC8P14922 966 aa8.63□□□□□ -1.03
SNP1YIL061C ALG1P16661 449 aa8.63□□□□□ -1.03
SNP1YIL061C RPL8BP29453 256 aaKnown RBP8.63□□□□□ -1.03
SNP1YIL061C AFG2P32794 780 aa8.63□□□□□ -1.03
SNP1YIL061C YER156CP40093 338 aaKnown RBP8.63□□□□□ -1.03
SNP1YIL061C TFG2P41896 400 aaPredicted RBP8.63□□□□□ -1.03
SNP1YIL061C DSE3Q08729 430 aa8.63□□□□□ -1.03
SNP1YIL061C SRM1P21827 482 aa8.62□□□□□ -1.03
SNP1YIL061C FOL1P53848 824 aa8.62□□□□□ -1.03
SNP1YIL061C MDM1Q01846 1127 aa8.62□□□□□ -1.03
SNP1YIL061C WAR1Q03631 944 aa8.62□□□□□ -1.03
SNP1YIL061C YOR296WQ08748 1289 aa8.62□□□□□ -1.03
SNP1YIL061C TIP41Q12199 356 aa8.62□□□□□ -1.03
SNP1YIL061C NBL1Q3E7Y6 73 aa8.62□□□□□ -1.03
SNP1YIL061C CIT1P00890 479 aa8.61□□□□□ -1.03
SNP1YIL061C NUC1P08466 329 aa8.61□□□□□ -1.03
SNP1YIL061C STI1P15705 589 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
SNP1YIL061C CCT3P39077 534 aaKnown RBP8.61□□□□□ -1.03
SNP1YIL061C UTP7P40055 554 aaKnown RBP8.61□□□□□ -1.03
SNP1YIL061C LYS14P40971 790 aa8.61□□□□□ -1.03
SNP1YIL061C DAK2P43550 591 aa8.61□□□□□ -1.03
SNP1YIL061C RET3P53600 189 aa8.61□□□□□ -1.03
SNP1YIL061C RTC4P53850 401 aa8.61□□□□□ -1.03
SNP1YIL061C TIM50Q02776 476 aa8.61□□□□□ -1.03
SNP1YIL061C CRF1Q04930 467 aa8.61□□□□□ -1.03
SNP1YIL061C EIS1Q05050 843 aaKnown RBP8.61□□□□□ -1.03
SNP1YIL061C TFC8Q12308 588 aa8.61□□□□□ -1.03
SNP1YIL061C TUS1Q06412 1307 aa8.6□□□□□ -1.03
SNP1YIL061C KIN1P13185 1064 aa8.6□□□□□ -1.03
SNP1YIL061C MAK11P20484 414 aaKnown RBP8.6□□□□□ -1.03
SNP1YIL061C SPB4P25808 606 aaPredicted RBP8.6□□□□□ -1.03
SNP1YIL061C CHS3P29465 1165 aa8.6□□□□□ -1.03
SNP1YIL061C PSY4P38193 441 aa8.6□□□□□ -1.03
SNP1YIL061C NOC2P39744 710 aaKnown RBP8.6□□□□□ -1.03
SNP1YIL061C MTC3P53077 123 aa8.6□□□□□ -1.03
SNP1YIL061C VPS30Q02948 557 aa8.6□□□□□ -1.03
SNP1YIL061C GIS4Q04233 774 aa8.6□□□□□ -1.03
SNP1YIL061C ACE2P21192 770 aa8.59□□□□□ -1.03
SNP1YIL061C HIR1P32479 840 aa8.59□□□□□ -1.03
SNP1YIL061C STT3P39007 718 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms